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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • cytosol 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007531_P001 Maize plastid 98.07 93.61
Zm00001d007548_P001 Maize plastid 96.53 92.14
Zm00001d007555_P001 Maize plastid 96.4 92.01
Zm00001d007559_P001 Maize plastid 96.65 91.92
KXG28799 Sorghum plastid 75.29 76.97
KXG35774 Sorghum cytosol, mitochondrion 42.73 70.19
TraesCS2B01G126900.1 Wheat cytosol 29.99 60.99
TraesCS1B01G038400.1 Wheat cytosol 46.07 58.88
TraesCS1A01G031600.1 Wheat cytosol 49.55 58.16
TraesCS1B01G039700.1 Wheat cytosol 45.43 58.06
TraesCS1D01G058400.1 Wheat cytosol 38.48 58.06
TraesCS1A01G055600.1 Wheat cytosol 23.68 56.62
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 57.27 56.54
TraesCS1B01G075300.1 Wheat cytosol 43.37 56.45
TraesCS1D01G033000.1 Wheat cytosol 29.34 56.44
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 50.71 56.37
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 57.4 56.31
TraesCS1D01G076700.1 Wheat cytosol 24.2 56.29
TraesCS1B01G039200.1 Wheat mitochondrion 56.76 56.25
TraesCS1B01G038500.1 Wheat mitochondrion 57.14 56.2
TraesCS1B01G039100.1 Wheat mitochondrion 56.63 56.19
TraesCS6B01G341800.2 Wheat cytosol 28.7 55.89
TraesCS1B01G038300.1 Wheat plastid 39.0 55.49
TraesCS1A01G056000.1 Wheat cytosol 28.7 55.47
TraesCS1D01G058500.1 Wheat plastid 40.67 55.44
TraesCS1D01G068700.1 Wheat cytosol 31.27 55.35
TraesCS1A01G067800.1 Wheat cytosol 26.64 55.35
TraesCS1A01G073700.1 Wheat cytosol 27.41 55.32
TraesCS1B01G038200.1 Wheat mitochondrion 44.92 55.13
TraesCS1B01G038600.1 Wheat cytosol 25.74 55.1
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 49.29 54.95
TraesCS1B01G085900.1 Wheat mitochondrion 57.14 54.55
TraesCS1A01G031700.1 Wheat plastid 51.99 54.52
HORVU1Hr1G004750.6 Barley plastid 55.98 54.51
TraesCS1D01G057700.1 Wheat cytosol 22.78 54.46
TraesCS1D01G067600.1 Wheat cytosol 25.48 54.25
TraesCS1D01G068900.1 Wheat mitochondrion 56.76 54.24
TraesCS1D01G076500.1 Wheat mitochondrion 46.2 54.07
TraesCS1A01G067600.1 Wheat mitochondrion 56.37 53.87
TraesCS1D01G068400.1 Wheat mitochondrion 57.01 53.83
TraesCS1A01G067400.1 Wheat mitochondrion 57.14 53.82
HORVU0Hr1G035310.1 Barley cytosol 40.28 53.78
TraesCS1B01G085400.1 Wheat cytosol 44.27 53.67
TraesCS1B01G073100.1 Wheat cytosol 41.83 53.63
TraesCS1B01G315500.1 Wheat mitochondrion 22.14 53.58
TraesCS1D01G056200.1 Wheat mitochondrion 56.76 53.45
TraesCS1D01G056700.1 Wheat cytosol 41.7 53.38
TraesCS1A01G054800.1 Wheat cytosol 39.9 53.26
TraesCS1B01G084800.1 Wheat cytosol 31.79 53.23
TraesCS1A01G055800.1 Wheat mitochondrion 52.77 53.18
TraesCS1B01G072400.1 Wheat cytosol 47.49 53.09
HORVU1Hr1G013810.1 Barley plastid 57.27 53.04
TraesCS1A01G054700.2 Wheat mitochondrion 55.34 52.96
TraesCS1D01G068500.1 Wheat mitochondrion 55.34 52.96
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 53.15 52.95
TraesCS1D01G055300.1 Wheat cytosol 41.96 52.75
TraesCS1B01G092500.1 Wheat mitochondrion 53.15 52.75
HORVU1Hr1G014040.1 Barley mitochondrion 56.5 52.7
TraesCS1D01G068800.1 Wheat plastid 55.21 52.57
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 56.11 52.53
TraesCS1D01G056600.1 Wheat mitochondrion 13.64 52.48
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 45.43 52.45
TraesCS6D01G290900.1 Wheat mitochondrion 49.42 52.39
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 48.26 52.3
TraesCS6A01G311600.1 Wheat mitochondrion 56.24 52.27
HORVU1Hr1G011250.1 Barley cytosol 19.82 52.2
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 42.86 52.11
HORVU6Hr1G076780.7 Barley mitochondrion 55.21 52.06
HORVU1Hr1G010970.1 Barley mitochondrion 55.21 51.94
TraesCS1B01G085300.1 Wheat mitochondrion 52.9 51.89
TraesCS1A01G054500.1 Wheat mitochondrion 51.74 51.54
TraesCS1D01G058000.1 Wheat cytosol 26.9 51.48
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 43.76 51.2
TraesCS1A01G067000.1 Wheat mitochondrion 46.98 50.98
TraesCS1D01G068600.1 Wheat plastid 22.27 50.88
TraesCS1A01G073600.1 Wheat mitochondrion 25.61 50.77
TraesCS1A01G057300.1 Wheat cytosol 46.72 50.56
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 22.01 50.0
TraesCS1D01G069100.1 Wheat mitochondrion 41.31 49.92
TraesCS1B01G086000.1 Wheat plastid 43.89 49.71
TraesCS1A01G073800.1 Wheat mitochondrion 21.11 49.25
HORVU0Hr1G031920.1 Barley plastid 54.44 49.19
TraesCS1D01G057800.1 Wheat mitochondrion 22.91 49.04
TraesCS1B01G072900.2 Wheat mitochondrion 55.08 49.03
HORVU1Hr1G011400.44 Barley plastid 38.61 48.7
TraesCS1A01G067700.1 Wheat extracellular 21.11 48.66
TraesCS1D01G076400.1 Wheat cytosol 22.65 48.48
TraesCS1B01G071600.1 Wheat mitochondrion 52.9 48.47
TraesCS1B01G073200.1 Wheat cytosol 18.79 48.18
TraesCS1A01G055500.1 Wheat mitochondrion 13.38 47.93
HORVU1Hr1G011150.1 Barley cytosol, plastid 54.44 47.9
TraesCS6D01G083300.1 Wheat mitochondrion 27.41 47.76
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 31.02 47.72
HORVU1Hr1G011160.2 Barley cytosol, plastid 54.95 47.71
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 46.98 47.65
HORVU1Hr1G014060.1 Barley plastid 54.57 47.64
TraesCS1B01G072300.1 Wheat plastid 34.62 47.36
TraesCS1D01G076900.1 Wheat plastid 39.64 46.88
TraesCS6B01G127200.1 Wheat cytosol 20.72 46.8
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 29.09 46.69
HORVU6Hr1G017870.2 Barley mitochondrion 18.02 46.67
HORVU1Hr1G010890.5 Barley cytosol 53.93 46.66
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 25.87 46.42
TraesCS6B01G127500.1 Wheat cytosol 29.21 46.33
TraesCS1B01G072700.1 Wheat cytosol 30.37 46.27
TraesCS6D01G083400.1 Wheat mitochondrion 29.34 46.25
TraesCS1B01G092600.1 Wheat plastid 30.76 46.23
HORVU1Hr1G011300.3 Barley plastid 54.44 45.98
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 29.73 45.92
TraesCS6D01G083100.1 Wheat cytosol 28.96 45.92
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 17.5 45.79
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 22.14 45.5
TraesCS1A01G066600.1 Wheat mitochondrion 15.32 45.25
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 13.26 45.18
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 27.93 45.11
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 27.28 44.17
Zm00001d018982_P001 Maize mitochondrion 19.69 43.71
Zm00001d009733_P001 Maize cytosol 44.4 43.4
TraesCS1A01G074000.1 Wheat mitochondrion 15.7 43.11
Os04t0351333-00 Rice cytosol 47.62 42.09
Os04t0349600-01 Rice plastid 20.72 41.6
Zm00001d009735_P001 Maize cytosol 44.53 35.56
Solyc06g007280.2.1 Tomato cytosol 10.94 33.33
TraesCS6B01G129100.1 Wheat cytosol, plastid 11.58 31.25
PGSC0003DMT400008759 Potato cytosol 12.61 30.72
Bra027636.1-P Field mustard cytosol 12.74 30.56
VIT_12s0028g02320.t01 Wine grape mitochondrion 18.66 30.4
KRH39112 Soybean cytosol 19.3 30.18
PGSC0003DMT400052977 Potato cytosol 15.06 30.08
KRH39057 Soybean cytosol 19.18 29.98
VIT_14s0081g00110.t01 Wine grape cytosol 18.92 29.94
Bra006187.1-P Field mustard plastid 11.2 29.9
KRH39004 Soybean cytosol 19.05 29.78
KRH39074 Soybean cytosol 19.05 29.78
KRH39072 Soybean cytosol 18.92 29.64
Bra021192.1-P Field mustard plastid 19.05 29.37
KRH40513 Soybean plastid 13.26 29.34
KRH39054 Soybean cytosol 18.66 29.18
Solyc06g005220.2.1 Tomato cytosol 15.19 29.06
Bra036649.1-P Field mustard cytosol 14.29 28.39
KRH09084 Soybean plastid 18.53 28.18
AT5G16640.1 Thale cress mitochondrion 18.28 28.17
PGSC0003DMT400025067 Potato cytosol 17.25 28.15
PGSC0003DMT400025087 Potato endoplasmic reticulum 17.89 28.08
Solyc06g007810.1.1 Tomato cytosol 9.65 27.99
AT1G63330.2 Thale cress cytosol 19.82 27.55
AT1G64580.1 Thale cress mitochondrion 18.53 27.53
KRH31646 Soybean cytosol 18.28 27.41
Bra036651.1-P Field mustard mitochondrion 18.79 27.29
Bra027029.1-P Field mustard mitochondrion 8.49 27.16
Bra025516.1-P Field mustard cytosol, mitochondrion 16.6 27.04
KRH17148 Soybean mitochondrion 18.92 26.97
CDX68679 Canola cytosol 3.99 26.96
VIT_14s0081g00120.t01 Wine grape plastid 20.21 26.93
PGSC0003DMT400008757 Potato cytosol 17.25 26.91
VIT_14s0081g00270.t01 Wine grape plastid 20.08 26.9
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 18.15 26.86
Bra026882.1-P Field mustard cytosol 18.4 26.78
KRH39066 Soybean cytosol 19.05 26.67
AT3G16710.1 Thale cress mitochondrion 17.37 26.63
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 17.25 26.53
KRH08636 Soybean cytosol 17.76 26.44
AT1G63080.3 Thale cress mitochondrion 20.85 26.38
Bra026884.1-P Field mustard cytosol 15.57 26.36
KRH41817 Soybean mitochondrion 18.79 26.31
KRH09154 Soybean mitochondrion 18.79 26.26
AT1G62930.1 Thale cress plastid 21.24 26.23
PGSC0003DMT400025074 Potato cytosol 18.53 26.09
KRH48615 Soybean mitochondrion 18.28 26.05
AT1G63130.1 Thale cress mitochondrion 21.11 26.03
PGSC0003DMT400056665 Potato mitochondrion 19.69 25.98
Bra026971.1-P Field mustard mitochondrion 20.98 25.91
AT1G62680.2 Thale cress plastid 18.28 25.91
AT1G62670.1 Thale cress mitochondrion 20.98 25.87
AT1G63400.1 Thale cress cytosol, plastid 19.18 25.82
AT1G64583.1 Thale cress mitochondrion 16.99 25.78
PGSC0003DMT400056663 Potato plastid 19.43 25.68
KRH08671 Soybean cytosol, mitochondrion 18.28 25.68
KRH08639 Soybean mitochondrion, plastid 18.66 25.66
AT1G62910.1 Thale cress mitochondrion 20.85 25.63
AT1G63070.1 Thale cress mitochondrion 19.43 25.59
PGSC0003DMT400053185 Potato mitochondrion 19.43 25.59
AT3G22470.1 Thale cress cytosol, mitochondrion 20.33 25.52
VIT_14s0081g00280.t01 Wine grape mitochondrion 20.98 25.51
KRH09082 Soybean cytosol 13.38 25.49
KRH09121 Soybean mitochondrion 17.5 25.47
Solyc06g007740.1.1 Tomato cytosol 19.3 25.42
KRH08628 Soybean plastid 18.02 25.36
Bra027726.1-P Field mustard mitochondrion 15.32 25.27
AT5G41170.1 Thale cress mitochondrion 17.12 25.24
KRH08277 Soybean plastid 18.4 25.22
KRH39050 Soybean mitochondrion 17.25 25.19
AT1G12775.1 Thale cress cytosol, mitochondrion 20.85 25.16
AT1G62720.1 Thale cress mitochondrion 15.7 25.15
AT1G12300.1 Thale cress mitochondrion 20.59 25.12
AT1G62590.1 Thale cress mitochondrion 20.46 25.08
Bra027658.1-P Field mustard cytosol, mitochondrion 17.5 25.05
AT1G62914.1 Thale cress mitochondrion 16.99 25.0
AT1G63150.1 Thale cress mitochondrion 20.21 24.96
KRH40400 Soybean plastid 18.53 24.96
AT1G12620.1 Thale cress cytosol, mitochondrion 19.82 24.8
Solyc06g007300.1.1 Tomato extracellular 18.79 24.66
Bra031731.1-P Field mustard mitochondrion 16.09 24.61
AT1G06580.1 Thale cress mitochondrion 15.83 24.6
KRH08607 Soybean cytosol 17.76 24.6
Bra026958.1-P Field mustard mitochondrion 20.08 24.49
KRH25652 Soybean cytosol, golgi 16.99 24.44
AT1G12700.2 Thale cress cytosol 19.43 24.43
VIT_14s0030g02280.t01 Wine grape plastid 17.63 24.42
Bra027026.1-P Field mustard mitochondrion 16.34 24.28
KRH09097 Soybean plastid 18.15 24.19
VIT_14s0030g02260.t01 Wine grape cytosol 13.77 24.15
KRH08625 Soybean plastid 17.89 24.13
Bra026401.1-P Field mustard plastid 16.6 24.11
Bra028267.1-P Field mustard mitochondrion 19.3 23.96
KRH09095 Soybean plastid 18.02 23.93
PGSC0003DMT400052971 Potato mitochondrion 18.15 23.78
AT4G26800.2 Thale cress mitochondrion, plastid 15.7 23.74
Bra026957.1-P Field mustard mitochondrion 18.4 23.71
PGSC0003DMT400053182 Potato cytosol 18.02 23.37
Solyc04g080120.1.1 Tomato extracellular 18.4 23.37
PGSC0003DMT400015293 Potato mitochondrion 18.28 23.28
PGSC0003DMT400015298 Potato mitochondrion 18.28 23.28
PGSC0003DMT400008760 Potato mitochondrion 17.5 23.21
Bra026954.1-P Field mustard mitochondrion 19.3 23.08
Bra016762.1-P Field mustard mitochondrion 17.89 22.9
PGSC0003DMT400053556 Potato mitochondrion 13.38 22.66
Bra026836.1-P Field mustard cytosol, mitochondrion 14.16 22.4
KRH08599 Soybean cytosol, plastid 19.05 22.12
KRH09085 Soybean mitochondrion 19.18 21.16
AT1G64100.2 Thale cress cytosol 21.24 20.47
Bra027656.1-P Field mustard cytosol 23.04 19.02
KRH12873 Soybean cytosol 15.96 17.82
KRH39064 Soybean cytosol 19.95 16.0
Bra016758.1-P Field mustard plastid 19.18 12.86
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1UniProt:A0A1D6F751GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990ProteinID:ONM27067.1PFAM:PF01535PFAM:PF12854PFAM:PF13041
PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF874InterPro:Pentatricopeptide_repeatSUPFAM:SSF48452TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sfUniParc:UPI0008456CAAEnsemblPlantsGene:Zm00001d007534EnsemblPlants:Zm00001d007534_P001EnsemblPlants:Zm00001d007534_T001SEG:seg
Description
Pentatricopeptide repeat-containing protein mitochondrial
Coordinates
chr2:-:234178088..234180421
Molecular Weight (calculated)
86665.2 Da
IEP (calculated)
8.293
GRAVY (calculated)
0.038
Length
777 amino acids
Sequence
(BLAST)
001: MPSCARISSA VSTAAASSSS PPPHPPRCRR LAAATARVRE GTLRPEEAHD LLDELQRRGT PVLERDLNGF LAALARAPSS AACRSGPALA VALFNRAASR
101: AQGPRVLSPT SHTYAILMDC CTRAHRPELA LAFFGQLLRT GLRVNIIIAN HLLKGFCEAK RTDEALDILL HRTPELGCVP DVFSYNTVID GFFKEGDVNK
201: ACDLFKEMVQ RGIPPDFVTY NSVVHALCKA RAMDKAEAFL RQMVNKGVLP NNWTYNNLIY GYSSTGQWKE AVRVFKEMRR HSILPDVVTL NMLMGSLCKY
301: GKIKEARDVF DTMAMKGQNP NVFSYTIMLN GYATKGCLVD MTDLFDLMLG DGIAPDIYTF SVLIKAYANC GMLDKAMIIF NEMRDHGVKP NVVTYRTVIA
401: ALCRIGKMDD AMEKFNQMID QGVAPDKYAY HCLIQGFCTH GSLLKAKELI LEIMNNGMRL DIVFFSSIIN NLCKLGRVME AQNIFDLTVN VGLHPTAVVY
501: SMLMDGYCLV GKMEKALRVF DAMVSAGIEP DDVVYGTLVN GYCKIGRIDE GLSLFREMLQ KGIKPSTILY NIIIDGLFQD GRTVPAKVKF HEMTESGIAM
601: DKYTYNIVLR GLFKNRCFDE AIFLFKELRA MNVKINIITL NTMIAGMFQT RRVEEAKDLF ASISRSGLVP CVVTYSIMIT NLIKEGLVEE AEDMFSSMQN
701: AGCEPNSRLL NHVVRELLKK NEIVRAGAYL SKIDERNFSL EHLTAMLLVD LFSSKGTCRE QIRFLPAKYH FLAEASP
Best Arabidopsis Sequence Match ( AT3G22470.1 )
(BLAST)
001: MIQRLIPLNR KASNFTQILE KGTSLLHYSS ITEAKLSYKE RLRNGIVDIK VNDAIDLFES MIQSRPLPTP IDFNRLCSAV ARTKQYDLVL GFCKGMELNG
101: IEHDMYTMTI MINCYCRKKK LLFAFSVLGR AWKLGYEPDT ITFSTLVNGF CLEGRVSEAV ALVDRMVEMK QRPDLVTVST LINGLCLKGR VSEALVLIDR
201: MVEYGFQPDE VTYGPVLNRL CKSGNSALAL DLFRKMEERN IKASVVQYSI VIDSLCKDGS FDDALSLFNE MEMKGIKADV VTYSSLIGGL CNDGKWDDGA
301: KMLREMIGRN IIPDVVTFSA LIDVFVKEGK LLEAKELYNE MITRGIAPDT ITYNSLIDGF CKENCLHEAN QMFDLMVSKG CEPDIVTYSI LINSYCKAKR
401: VDDGMRLFRE ISSKGLIPNT ITYNTLVLGF CQSGKLNAAK ELFQEMVSRG VPPSVVTYGI LLDGLCDNGE LNKALEIFEK MQKSRMTLGI GIYNIIIHGM
501: CNASKVDDAW SLFCSLSDKG VKPDVVTYNV MIGGLCKKGS LSEADMLFRK MKEDGCTPDD FTYNILIRAH LGGSGLISSV ELIEEMKVCG FSADSSTIKM
601: VIDMLSDRRL DKSFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ83]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.