Factsheet for Solyc06g005220.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g065490.2.1
Solyc10g006000.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	Solyc07g065490.2.1	AT4G26630.1	25387881
AT1G62670.1	Solyc10g006000.2.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g007280.2.1	Tomato	cytosol	43.84	69.8
PGSC0003DMT400025074	Potato	cytosol	86.7	63.77
Solyc06g007810.1.1	Tomato	cytosol	40.64	61.57
Solyc06g007740.1.1	Tomato	cytosol	72.91	50.17
Solyc06g007300.1.1	Tomato	extracellular	72.91	50.0
Bra027636.1-P	Field mustard	cytosol	30.3	37.96
CDY09968	Canola	cytosol	26.85	37.07
Bra027029.1-P	Field mustard	mitochondrion	22.17	37.04
CDY16110	Canola	extracellular	36.95	36.59
CDY06217	Canola	cytosol	26.35	36.52
VIT_14s0081g00110.t01	Wine grape	cytosol	43.6	36.05
CDY51169	Canola	cytosol	37.19	35.7
CDY16031	Canola	cytosol	27.34	35.69
CDY16002	Canola	cytosol	26.6	34.73
CDY26588	Canola	extracellular	27.59	34.57
Solyc04g080120.1.1	Tomato	extracellular	51.97	34.48
VIT_12s0028g02320.t01	Wine grape	mitochondrion	38.67	32.91
CDY39810	Canola	cytosol	31.28	32.48
Bra026884.1-P	Field mustard	cytosol	36.45	32.24
Bra036649.1-P	Field mustard	cytosol	31.03	32.23
CDY03257	Canola	cytosol	30.79	31.97
CDY46909	Canola	mitochondrion	22.91	31.85
CDX71969	Canola	cytosol	30.54	31.31
Bra006187.1-P	Field mustard	plastid	22.17	30.93
VIT_14s0081g00270.t01	Wine grape	plastid	43.84	30.69
CDY34688	Canola	cytosol	27.09	30.39
VIT_14s0081g00120.t01	Wine grape	plastid	43.6	30.36
KRH70370	Soybean	cytosol	39.9	29.78
VIT_14s0030g02260.t01	Wine grape	cytosol	32.27	29.57
CDY26607	Canola	cytosol	33.25	29.54
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.69	28.28
KRH49698	Soybean	cytosol	39.66	28.25
Bra031731.1-P	Field mustard	mitochondrion	35.22	28.15
HORVU1Hr1G018190.2	Barley	cytosol	19.7	28.07
CDX67634	Canola	cytosol	29.06	27.9
VIT_14s0081g00280.t01	Wine grape	mitochondrion	43.84	27.86
AT3G22470.1	Thale cress	cytosol, mitochondrion	41.87	27.46
KRH38755	Soybean	mitochondrion	39.66	27.1
VIT_14s0030g02280.t01	Wine grape	plastid	37.44	27.09
KRH09256	Soybean	mitochondrion	37.19	27.01
AT1G63330.2	Thale cress	cytosol	36.95	26.83
AT1G62720.1	Thale cress	mitochondrion	32.02	26.8
CDY35831	Canola	mitochondrion	33.99	26.8
Bra026882.1-P	Field mustard	cytosol	34.98	26.59
Bra026958.1-P	Field mustard	mitochondrion	41.63	26.53
KRH58843	Soybean	nucleus	39.9	26.51
TraesCS2B01G126900.1	Wheat	cytosol	24.88	26.44
CDY16026	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	35.71	26.41
AT1G62930.1	Thale cress	plastid	40.64	26.23
KRH42744	Soybean	mitochondrion	39.41	26.19
TraesCS6B01G127200.1	Wheat	cytosol	22.17	26.16
CDY00489	Canola	mitochondrion	37.68	26.11
Bra021192.1-P	Field mustard	plastid	32.27	25.99
AT1G12700.2	Thale cress	cytosol	39.41	25.89
CDY34969	Canola	mitochondrion	32.27	25.89
Bra028267.1-P	Field mustard	mitochondrion	39.9	25.88
KRH75045	Soybean	mitochondrion	37.93	25.8
HORVU1Hr1G011250.1	Barley	cytosol	18.72	25.76
KRH75048	Soybean	mitochondrion	38.42	25.66
Os10t0501700-00	Rice	cytosol	28.57	25.55
Bra026957.1-P	Field mustard	mitochondrion	37.93	25.54
AT3G16710.1	Thale cress	mitochondrion	31.77	25.44
AT1G63150.1	Thale cress	mitochondrion	39.41	25.44
AT5G16640.1	Thale cress	mitochondrion	31.53	25.4
CDY08386	Canola	cytosol	27.83	25.39
CDY34375	Canola	mitochondrion	32.27	25.34
KRH75063	Soybean	mitochondrion, plastid	37.68	25.33
AT1G12300.1	Thale cress	mitochondrion	39.66	25.27
CDY25492	Canola	mitochondrion	30.54	25.25
AT1G62910.1	Thale cress	mitochondrion	39.16	25.16
Bra025516.1-P	Field mustard	cytosol, mitochondrion	29.56	25.16
Bra026971.1-P	Field mustard	mitochondrion	38.92	25.12
AT1G63130.1	Thale cress	mitochondrion	38.92	25.08
Bra026836.1-P	Field mustard	cytosol, mitochondrion	30.3	25.05
Bra027026.1-P	Field mustard	mitochondrion	32.27	25.05
CDY68929	Canola	mitochondrion	37.44	25.04
AT1G12620.1	Thale cress	cytosol, mitochondrion	38.18	24.96
Bra016762.1-P	Field mustard	mitochondrion	37.19	24.88
CDY26593	Canola	cytosol	37.19	24.79
AT1G63080.3	Thale cress	mitochondrion	37.44	24.76
CDX69436	Canola	plastid	30.3	24.7
Bra027658.1-P	Field mustard	cytosol, mitochondrion	33.0	24.68
Bra036651.1-P	Field mustard	mitochondrion	32.51	24.67
CDY16033	Canola	cytosol	9.11	24.67
AT1G63400.1	Thale cress	cytosol, plastid	34.98	24.61
CDY46912	Canola	mitochondrion	29.8	24.49
CDY34870	Canola	mitochondrion	17.24	24.39
TraesCS1A01G067700.1	Wheat	extracellular	20.2	24.33
CDY46394	Canola	mitochondrion	28.82	24.32
CDY48949	Canola	mitochondrion	28.82	24.32
CDY66357	Canola	cytosol	22.66	24.27
AT1G64583.1	Thale cress	mitochondrion	30.54	24.22
AT1G62590.1	Thale cress	mitochondrion	37.68	24.13
AT1G62670.1	Thale cress	mitochondrion	37.44	24.13
AT1G62914.1	Thale cress	mitochondrion	31.28	24.05
CDY33797	Canola	mitochondrion	30.3	24.02
CDY31272	Canola	mitochondrion	33.5	23.94
CDY65983	Canola	mitochondrion	24.88	23.93
AT1G62680.2	Thale cress	plastid	32.27	23.91
AT1G12775.1	Thale cress	cytosol, mitochondrion	37.68	23.76
CDY49646	Canola	mitochondrion	29.31	23.75
CDY26565	Canola	mitochondrion	33.25	23.73
AT5G41170.1	Thale cress	mitochondrion	30.79	23.72
AT1G06580.1	Thale cress	mitochondrion	29.06	23.6
Bra026954.1-P	Field mustard	mitochondrion	37.68	23.54
CDY33753	Canola	mitochondrion	25.62	23.42
AT1G64580.1	Thale cress	mitochondrion	30.05	23.33
Os10t0497366-00	Rice	mitochondrion	22.91	23.19
AT1G63070.1	Thale cress	mitochondrion	33.5	23.05
TraesCS1D01G058000.1	Wheat	cytosol	22.91	22.91
CDY25522	Canola	mitochondrion, plastid	25.12	22.82
AT4G26800.2	Thale cress	mitochondrion, plastid	28.33	22.37
CDY29251	Canola	mitochondrion	27.83	22.29
CDY28348	Canola	mitochondrion, plastid	32.76	22.24
CDY25519	Canola	mitochondrion, plastid	34.98	22.22
Bra026401.1-P	Field mustard	plastid	28.82	21.87
CDX89301	Canola	plastid	28.82	21.87
Zm00001d018982_P001	Maize	mitochondrion	18.72	21.71
TraesCS6D01G017800.1	Wheat	cytosol	28.57	21.6
CDY66358	Canola	mitochondrion	20.69	21.54
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	19.95	21.43
TraesCS1D01G058400.1	Wheat	cytosol	27.09	21.36
TraesCS6A01G083000.1	Wheat	cytosol	23.65	21.05
HORVU6Hr1G017870.2	Barley	mitochondrion	15.52	21.0
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	26.35	20.94
CDY31271	Canola	mitochondrion	24.88	20.78
TraesCS1B01G072700.1	Wheat	cytosol	25.86	20.59
TraesCS6D01G017700.1	Wheat	plastid	26.85	20.41
TraesCS1B01G038400.1	Wheat	cytosol	30.3	20.23
Os10t0495100-01	Rice	cytosol, mitochondrion	22.91	20.17
Bra027726.1-P	Field mustard	mitochondrion	23.4	20.17
CDY16032	Canola	mitochondrion	20.2	20.1
TraesCS1B01G085400.1	Wheat	cytosol	31.53	19.97
TraesCS7B01G469500.1	Wheat	cytosol	27.59	19.93
CDX68680	Canola	mitochondrion	22.66	19.91
HORVU0Hr1G035310.1	Barley	cytosol	28.08	19.59
TraesCS6D01G083300.1	Wheat	mitochondrion	21.18	19.28
TraesCS1D01G055300.1	Wheat	cytosol	29.31	19.26
CDY47835	Canola	mitochondrion	20.69	19.22
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	23.65	19.09
TraesCS1B01G039700.1	Wheat	cytosol	28.57	19.08
KXG34536	Sorghum	mitochondrion	26.85	19.06
TraesCS6A01G015000.1	Wheat	mitochondrion	19.46	19.04
TraesCS1D01G056700.1	Wheat	cytosol	28.33	18.95
TraesCSU01G089700.1	Wheat	mitochondrion	22.41	18.88
Os08t0248400-01	Rice	mitochondrion	20.44	18.86
AT1G64100.2	Thale cress	cytosol	37.44	18.86
TraesCSU01G090200.1	Wheat	cytosol	20.44	18.78
TraesCS6B01G114300.1	Wheat	cytosol	17.98	18.77
TraesCS6A01G014600.1	Wheat	cytosol	18.23	18.73
TraesCS1A01G054800.1	Wheat	cytosol	26.85	18.73
TraesCS1B01G073100.1	Wheat	cytosol	27.83	18.65
TraesCS2B01G560300.1	Wheat	cytosol	26.11	18.63
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.31	18.62
Os10t0499500-01	Rice	mitochondrion	22.91	18.38
TraesCS1B01G038200.1	Wheat	mitochondrion	28.57	18.33
TraesCS1A01G031600.1	Wheat	cytosol	29.8	18.28
TraesCS1B01G075300.1	Wheat	cytosol	26.85	18.26
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	19.7	18.22
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	29.8	18.22
KXG35774	Sorghum	cytosol, mitochondrion	21.18	18.18
Os08t0107800-01	Rice	mitochondrion	27.83	18.11
OQU82831	Sorghum	cytosol	27.34	18.11
TraesCS2B01G559900.1	Wheat	cytosol	24.14	18.08
TraesCS6B01G021600.1	Wheat	mitochondrion	31.53	17.88
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	22.17	17.82
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	29.31	17.68
TraesCSU01G089800.1	Wheat	mitochondrion	15.27	17.66
EER95949	Sorghum	mitochondrion	28.57	17.5
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	20.69	17.46
TraesCS1B01G072400.1	Wheat	cytosol	29.8	17.41
CDY26589	Canola	cytosol	2.96	17.39
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	20.69	17.36
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	30.54	17.34
OQU88594	Sorghum	cytosol	22.17	17.24
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	30.3	17.23
TraesCS2A01G531100.1	Wheat	cytosol	24.14	17.22
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	30.3	17.2
TraesCS1A01G067000.1	Wheat	mitochondrion	30.3	17.18
TraesCS2A01G531000.1	Wheat	golgi	28.57	17.08
HORVU6Hr1G014310.1	Barley	mitochondrion	28.82	17.03
TraesCS6D01G076500.1	Wheat	plastid	18.97	17.0
CDY34370	Canola	cytosol	34.24	16.93
TraesCS1A01G031700.1	Wheat	plastid	30.79	16.87
TraesCS2D01G532400.1	Wheat	cytosol	25.37	16.86
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	27.34	16.84
TraesCS6D01G083400.1	Wheat	mitochondrion	20.44	16.84
TraesCS1B01G073200.1	Wheat	cytosol	12.56	16.83
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	28.57	16.64
TraesCS7D01G231400.1	Wheat	cytosol, plastid	16.5	16.63
CDY16003	Canola	cytosol, plastid	16.01	16.62
TraesCS1B01G086000.1	Wheat	plastid	28.08	16.62
TraesCS2A01G526200.1	Wheat	golgi	27.83	16.59
TraesCS1A01G057300.1	Wheat	cytosol	29.31	16.57
TraesCS6D01G047700.1	Wheat	mitochondrion	28.08	16.5
OQU82856	Sorghum	cytosol	30.54	16.49
TraesCS2D01G532500.1	Wheat	plastid	27.59	16.47
TraesCS1D01G076500.1	Wheat	mitochondrion	26.85	16.42
TraesCS6D01G290900.1	Wheat	mitochondrion	29.56	16.37
Os10t0495200-01	Rice	mitochondrion	31.53	16.37
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	15.27	16.36
TraesCS2D01G532100.1	Wheat	mitochondrion	27.83	16.33
TraesCS6B01G127500.1	Wheat	cytosol	19.7	16.33
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	28.08	16.31
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	13.05	16.31
CDX81633	Canola	extracellular, golgi, plasma membrane	36.45	16.28
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	28.57	16.22
EES09203	Sorghum	cytosol	31.77	16.17
TraesCS1B01G072300.1	Wheat	plastid	22.41	16.02
EES07882	Sorghum	cytosol	30.54	15.96
TraesCS6D01G083100.1	Wheat	cytosol	19.21	15.92
TraesCS1B01G085300.1	Wheat	mitochondrion	30.79	15.78
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	30.3	15.77
TraesCS1B01G084800.1	Wheat	cytosol	17.98	15.73
TraesCS1B01G039100.1	Wheat	mitochondrion	30.3	15.71
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	16.75	15.7
TraesCS1B01G092600.1	Wheat	plastid	19.95	15.67
TraesCS1D01G056200.1	Wheat	mitochondrion	31.77	15.64
Os10t0497300-01	Rice	mitochondrion	30.54	15.62
TraesCS1B01G038500.1	Wheat	mitochondrion	30.3	15.57
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	30.3	15.53
TraesCS1B01G071600.1	Wheat	mitochondrion	32.27	15.45
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	18.23	15.42
TraesCS1A01G073700.1	Wheat	cytosol	14.53	15.32
TraesCS1D01G068600.1	Wheat	plastid	12.81	15.29
TraesCS1A01G054500.1	Wheat	mitochondrion	29.31	15.26
TraesCS1D01G068900.1	Wheat	mitochondrion	30.54	15.25
Zm00001d007531_P001	Maize	plastid	30.54	15.23
Zm00001d007555_P001	Maize	plastid	30.54	15.23
Zm00001d009733_P001	Maize	cytosol	29.8	15.22
Zm00001d007534_P001	Maize	plastid	29.06	15.19
TraesCS1B01G085900.1	Wheat	mitochondrion	30.3	15.11
HORVU6Hr1G002890.6	Barley	cytosol, plastid	29.56	15.09
TraesCS1D01G068500.1	Wheat	mitochondrion	30.05	15.02
Os08t0107700-01	Rice	cytosol, mitochondrion	13.79	14.97
TraesCS6A01G311600.1	Wheat	mitochondrion	30.79	14.95
TraesCS1D01G068800.1	Wheat	plastid	30.05	14.95
HORVU6Hr1G076780.7	Barley	mitochondrion	30.3	14.93
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	12.56	14.91
TraesCS2D01G532300.1	Wheat	plastid	28.57	14.91
TraesCS1A01G054700.2	Wheat	mitochondrion	29.8	14.9
TraesCS1A01G067600.1	Wheat	mitochondrion	29.8	14.88
Bra027656.1-P	Field mustard	cytosol	34.48	14.88
Zm00001d007548_P001	Maize	plastid	29.8	14.86
Zm00001d007559_P001	Maize	plastid	29.8	14.81
TraesCS1A01G067400.1	Wheat	mitochondrion	30.05	14.79
TraesCS1D01G068400.1	Wheat	mitochondrion	29.8	14.7
OQU82823	Sorghum	cytosol	28.82	14.68
OQU82827	Sorghum	cytosol	28.82	14.68
TraesCS2A01G530600.1	Wheat	cytosol	27.59	14.64
KXG28799	Sorghum	plastid	27.34	14.61
TraesCS1D01G068700.1	Wheat	cytosol	15.76	14.58
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	29.8	14.58
HORVU1Hr1G010970.1	Barley	mitochondrion	29.56	14.53
TraesCS1D01G069100.1	Wheat	mitochondrion	22.91	14.46
HORVU0Hr1G031920.1	Barley	plastid	30.54	14.42
TraesCS1B01G039200.1	Wheat	mitochondrion	27.83	14.41
OQU82836	Sorghum	cytosol	21.67	14.38
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	27.83	14.36
TraesCS2D01G532600.1	Wheat	plastid	27.34	14.3
HORVU1Hr1G004750.6	Barley	plastid	28.08	14.29
TraesCS1A01G073600.1	Wheat	mitochondrion	13.79	14.29
KXG27690	Sorghum	cytosol, plastid	25.62	14.23
TraesCS1D01G076700.1	Wheat	cytosol	11.58	14.07
OQU80148	Sorghum	mitochondrion	25.12	14.03
TraesCS1A01G055800.1	Wheat	mitochondrion	26.6	14.01
TraesCS2B01G560700.1	Wheat	plastid	26.6	14.01
HORVU1Hr1G014040.1	Barley	mitochondrion	28.57	13.93
Bra016758.1-P	Field mustard	plastid	39.66	13.89
TraesCS1B01G072900.2	Wheat	mitochondrion	29.8	13.86
HORVU1Hr1G011160.2	Barley	cytosol, plastid	30.54	13.85
HORVU1Hr1G014060.1	Barley	plastid	30.05	13.71
TraesCS1B01G315500.1	Wheat	mitochondrion	10.84	13.71
HORVU1Hr1G013810.1	Barley	plastid	28.33	13.71
HORVU1Hr1G010890.5	Barley	cytosol	30.3	13.7
Os08t0110200-01	Rice	mitochondrion	26.85	13.66
HORVU1Hr1G011150.1	Barley	cytosol, plastid	29.31	13.48
TraesCS1B01G092500.1	Wheat	mitochondrion	25.86	13.41
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	25.12	13.32
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	23.4	13.25
HORVU1Hr1G011300.3	Barley	plastid	29.56	13.04
KXG19780	Sorghum	cytosol	18.97	13.03
TraesCS1D01G057800.1	Wheat	mitochondrion	11.58	12.95
OQU82833	Sorghum	cytosol	14.29	12.95
TraesCS6B01G341800.2	Wheat	cytosol	12.56	12.78
TraesCS1D01G076400.1	Wheat	cytosol	11.33	12.67
Os04t0349600-01	Rice	plastid	12.07	12.66
TraesCS1D01G076900.1	Wheat	plastid	20.44	12.63
TraesCS1A01G073800.1	Wheat	mitochondrion	10.34	12.61
Os04t0351333-00	Rice	cytosol	27.09	12.51
TraesCS1A01G056000.1	Wheat	cytosol	12.32	12.44
TraesCS1D01G033000.1	Wheat	cytosol	12.32	12.38
Zm00001d009735_P001	Maize	cytosol	29.31	12.23
CDY34680	Canola	cytosol	27.09	12.06
TraesCS1B01G038600.1	Wheat	cytosol	10.34	11.57
CDY31277	Canola	plastid	27.09	11.47
TraesCS1D01G067600.1	Wheat	cytosol	10.1	11.23
OQU88581	Sorghum	cytosol	29.8	11.13
OQU82834	Sorghum	cytosol	25.86	10.9
OQU82832	Sorghum	cytosol	7.64	10.84
CDY15970	Canola	cytosol	2.46	10.64
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	6.4	10.28
TraesCS1A01G055600.1	Wheat	cytosol	8.13	10.15
TraesCS1A01G067800.1	Wheat	cytosol	9.11	9.89
TraesCS1D01G057700.1	Wheat	cytosol	7.88	9.85
Os10t0497432-01	Rice	mitochondrion	6.4	9.77
TraesCS2D01G532200.1	Wheat	cytosol	6.9	9.56
HORVU1Hr1G011400.44	Barley	plastid	14.29	9.42
TraesCS1D01G058500.1	Wheat	plastid	13.05	9.3
TraesCS1B01G038300.1	Wheat	plastid	10.34	7.69
TraesCS1A01G066600.1	Wheat	mitochondrion	3.69	5.7
TraesCS1A01G074000.1	Wheat	mitochondrion	3.94	5.65
TraesCS6B01G129100.1	Wheat	cytosol, plastid	3.45	4.86
TraesCS1A01G055500.1	Wheat	mitochondrion	0.99	1.84
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	0.74	1.32
TraesCS1D01G056600.1	Wheat	mitochondrion	0.49	0.99
CDY21063	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987
GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	UniProt:K4C306
PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF848	InterPro:Pentatricopeptide_repeat
SUPFAM:SSF81901	EnsemblPlantsGene:Solyc06g005220.2	EnsemblPlants:Solyc06g005220.2.1	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002765B22

Description

No Description!

Coordinates

chr6:-:241201..243335

Molecular Weight (calculated)

45759.5 Da

IEP (calculated)

7.408

GRAVY (calculated)

-0.031

Length

406 amino acids

Sequence
(BLAST)

001: MVKDAVELFK KVVREKICEP DTVMYATVMN GLCKRGYTEK TLSLLRLMEQ GNNTKPNINN YSIIIDALCK DGNLDVAINL MNEMKQKDIP PDIVTYNSII
101: DGMCKLGEWE KCKTFFSEMV NLNIYPNVQT FTILTDGLCK EGKVEAAMEV MGYMIEKGVE PNVFTYNSIM DGYCLTGQLD EARRLFDFMI NRCIEPNIIS
201: YNILINGYCK KKKLPEAMQL FCEISQKGPK PSTSTYNTIL QGLLGVGRIG SAKSIYAEML SAGCIPNLYT HGILLNGYFK YGLVEEAISL FNKLEKKGEN
301: TDIGFYNVVI NGLCKNGKLD EAHALFEKLS SMGLLPNVKT YTVMITGFCL QGLLDEAKYM LMKMVGNNCY PNNFTYNVMV QGFLRCSRIS EMTIFMKEMT
401: GRGLLI

Best Arabidopsis Sequence Match ( AT3G22470.1 )
(BLAST)

001: MIQRLIPLNR KASNFTQILE KGTSLLHYSS ITEAKLSYKE RLRNGIVDIK VNDAIDLFES MIQSRPLPTP IDFNRLCSAV ARTKQYDLVL GFCKGMELNG
101: IEHDMYTMTI MINCYCRKKK LLFAFSVLGR AWKLGYEPDT ITFSTLVNGF CLEGRVSEAV ALVDRMVEMK QRPDLVTVST LINGLCLKGR VSEALVLIDR
201: MVEYGFQPDE VTYGPVLNRL CKSGNSALAL DLFRKMEERN IKASVVQYSI VIDSLCKDGS FDDALSLFNE MEMKGIKADV VTYSSLIGGL CNDGKWDDGA
301: KMLREMIGRN IIPDVVTFSA LIDVFVKEGK LLEAKELYNE MITRGIAPDT ITYNSLIDGF CKENCLHEAN QMFDLMVSKG CEPDIVTYSI LINSYCKAKR
401: VDDGMRLFRE ISSKGLIPNT ITYNTLVLGF CQSGKLNAAK ELFQEMVSRG VPPSVVTYGI LLDGLCDNGE LNKALEIFEK MQKSRMTLGI GIYNIIIHGM
501: CNASKVDDAW SLFCSLSDKG VKPDVVTYNV MIGGLCKKGS LSEADMLFRK MKEDGCTPDD FTYNILIRAH LGGSGLISSV ELIEEMKVCG FSADSSTIKM
601: VIDMLSDRRL DKSFLDMLS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ83]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.