Factsheet for AT5G16640.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69436	Canola	plastid	73.21	74.1
CDY49646	Canola	mitochondrion	73.41	73.85
Bra006187.1-P	Field mustard	plastid	41.67	72.16
AT3G16710.1	Thale cress	mitochondrion	56.55	56.21
AT1G06580.1	Thale cress	mitochondrion	54.96	55.4
AT1G62720.1	Thale cress	mitochondrion	51.98	54.02
AT5G41170.1	Thale cress	mitochondrion	56.15	53.7
AT1G62680.2	Thale cress	plastid	57.74	53.1
AT1G64580.1	Thale cress	mitochondrion	54.96	52.96
AT1G64583.1	Thale cress	mitochondrion	52.58	51.76
AT1G63400.1	Thale cress	cytosol, plastid	58.53	51.13
AT1G62914.1	Thale cress	mitochondrion	50.99	48.67
AT1G62670.1	Thale cress	mitochondrion	60.12	48.1
AT1G63130.1	Thale cress	mitochondrion	58.33	46.67
AT1G63330.2	Thale cress	cytosol	51.19	46.15
AT4G26800.2	Thale cress	mitochondrion, plastid	46.83	45.91
AT1G62590.1	Thale cress	mitochondrion	57.74	45.9
AT1G62910.1	Thale cress	mitochondrion	57.34	45.73
AT1G63150.1	Thale cress	mitochondrion	56.35	45.15
AT1G63080.3	Thale cress	mitochondrion	54.96	45.11
AT1G63070.1	Thale cress	mitochondrion	52.78	45.08
AT1G62930.1	Thale cress	plastid	56.15	44.99
VIT_12s0028g02320.t01	Wine grape	mitochondrion	38.29	40.46
AT1G12620.1	Thale cress	cytosol, mitochondrion	48.81	39.61
AT3G22470.1	Thale cress	cytosol, mitochondrion	48.61	39.58
AT1G12300.1	Thale cress	mitochondrion	49.8	39.4
AT1G12700.2	Thale cress	cytosol	45.83	37.38
AT1G12775.1	Thale cress	cytosol, mitochondrion	46.63	36.49
Solyc06g007280.2.1	Tomato	cytosol	18.25	36.08
VIT_14s0081g00270.t01	Wine grape	plastid	38.69	33.62
VIT_14s0081g00120.t01	Wine grape	plastid	38.69	33.45
PGSC0003DMT400052977	Potato	cytosol	25.2	32.65
PGSC0003DMT400008759	Potato	cytosol	20.44	32.29
VIT_14s0081g00110.t01	Wine grape	cytosol	31.35	32.18
VIT_14s0030g02280.t01	Wine grape	plastid	35.71	32.09
KRH70370	Soybean	cytosol	34.33	31.8
Solyc06g005220.2.1	Tomato	cytosol	25.4	31.53
HORVU1Hr1G011250.1	Barley	cytosol	18.25	31.19
PGSC0003DMT400025074	Potato	cytosol	34.13	31.16
KRH09256	Soybean	mitochondrion	34.33	30.95
KRH58843	Soybean	nucleus	37.5	30.93
PGSC0003DMT400008757	Potato	cytosol	30.56	30.92
Solyc06g007300.1.1	Tomato	extracellular	36.31	30.91
KRH42744	Soybean	mitochondrion	37.3	30.77
KRH49698	Soybean	cytosol	34.72	30.7
KRH38755	Soybean	mitochondrion	36.11	30.64
PGSC0003DMT400025087	Potato	endoplasmic reticulum	29.96	30.51
Solyc06g007740.1.1	Tomato	cytosol	35.32	30.17
PGSC0003DMT400008760	Potato	mitochondrion	34.92	30.03
KRH75045	Soybean	mitochondrion	35.52	29.98
KRH75063	Soybean	mitochondrion, plastid	35.91	29.97
VIT_14s0081g00280.t01	Wine grape	mitochondrion	37.9	29.89
PGSC0003DMT400053556	Potato	mitochondrion	27.18	29.85
PGSC0003DMT400052971	Potato	mitochondrion	34.92	29.68
PGSC0003DMT400056663	Potato	plastid	34.52	29.59
PGSC0003DMT400056665	Potato	mitochondrion	34.52	29.54
PGSC0003DMT400053185	Potato	mitochondrion	34.33	29.32
TraesCS2B01G126900.1	Wheat	cytosol	22.22	29.32
KRH75048	Soybean	mitochondrion	34.72	28.78
PGSC0003DMT400025067	Potato	cytosol	26.98	28.57
Solyc06g007810.1.1	Tomato	cytosol	14.68	27.61
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	16.27	27.61
OQU82832	Sorghum	cytosol	15.28	26.92
PGSC0003DMT400053182	Potato	cytosol	31.75	26.71
Solyc04g080120.1.1	Tomato	extracellular	31.55	25.98
PGSC0003DMT400015293	Potato	mitochondrion	31.35	25.9
PGSC0003DMT400015298	Potato	mitochondrion	31.35	25.9
AT1G64100.2	Thale cress	cytosol	41.27	25.81
VIT_14s0030g02260.t01	Wine grape	cytosol	22.42	25.51
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	25.79	25.44
Os10t0495100-01	Rice	cytosol, mitochondrion	23.21	25.38
Os10t0497366-00	Rice	mitochondrion	19.84	24.94
Os10t0501700-00	Rice	cytosol	22.42	24.89
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	24.8	24.85
KXG34536	Sorghum	mitochondrion	28.17	24.83
Os08t0248400-01	Rice	mitochondrion	21.63	24.77
TraesCS1D01G058000.1	Wheat	cytosol	19.84	24.63
Zm00001d018982_P001	Maize	mitochondrion	17.06	24.57
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	18.25	24.34
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	23.21	24.32
TraesCS6D01G083300.1	Wheat	mitochondrion	21.43	24.22
TraesCS1A01G067700.1	Wheat	extracellular	16.07	24.04
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	23.02	23.97
TraesCSU01G089700.1	Wheat	mitochondrion	22.82	23.86
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	20.63	23.69
HORVU6Hr1G017870.2	Barley	mitochondrion	14.09	23.67
TraesCS6A01G015000.1	Wheat	mitochondrion	19.44	23.61
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	23.61	23.56
TraesCS6B01G127200.1	Wheat	cytosol	16.07	23.55
TraesCS1D01G068600.1	Wheat	plastid	15.87	23.53
TraesCS6D01G083400.1	Wheat	mitochondrion	22.82	23.33
TraesCS1B01G038200.1	Wheat	mitochondrion	29.17	23.22
Os08t0107700-01	Rice	cytosol, mitochondrion	16.67	22.46
TraesCS6B01G127500.1	Wheat	cytosol	21.83	22.45
TraesCS6D01G083100.1	Wheat	cytosol	21.43	22.04
TraesCSU01G090200.1	Wheat	cytosol	19.25	21.95
OQU88594	Sorghum	cytosol	22.62	21.84
EER95949	Sorghum	mitochondrion	28.57	21.72
TraesCS7D01G231400.1	Wheat	cytosol, plastid	17.26	21.59
TraesCS1B01G072700.1	Wheat	cytosol	21.83	21.57
TraesCS1B01G315500.1	Wheat	mitochondrion	13.69	21.5
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	18.45	21.48
TraesCS7B01G469500.1	Wheat	cytosol	23.81	21.35
Os08t0107800-01	Rice	mitochondrion	26.19	21.15
Os10t0499500-01	Rice	mitochondrion	21.23	21.15
TraesCS1B01G072300.1	Wheat	plastid	23.81	21.13
HORVU1Hr1G018190.2	Barley	cytosol	11.9	21.05
TraesCS1D01G058400.1	Wheat	cytosol	21.43	20.97
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	13.49	20.92
TraesCSU01G089800.1	Wheat	mitochondrion	14.29	20.51
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	19.44	20.42
TraesCS6D01G076500.1	Wheat	plastid	18.25	20.31
TraesCS6A01G083000.1	Wheat	cytosol	18.25	20.18
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	27.58	19.89
HORVU6Hr1G014310.1	Barley	mitochondrion	26.98	19.8
TraesCS1A01G031600.1	Wheat	cytosol	25.99	19.79
TraesCS1B01G038400.1	Wheat	cytosol	23.81	19.74
TraesCS1A01G031700.1	Wheat	plastid	28.97	19.7
TraesCS2A01G531000.1	Wheat	golgi	26.39	19.59
TraesCS1B01G092600.1	Wheat	plastid	20.04	19.54
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	14.68	19.53
HORVU0Hr1G035310.1	Barley	cytosol	22.42	19.42
EES09203	Sorghum	cytosol	30.56	19.3
TraesCS1A01G073800.1	Wheat	mitochondrion	12.7	19.22
TraesCS6D01G290900.1	Wheat	mitochondrion	27.78	19.1
KXG27690	Sorghum	cytosol, plastid	27.58	19.02
TraesCS1D01G057800.1	Wheat	mitochondrion	13.69	19.01
TraesCS1D01G069100.1	Wheat	mitochondrion	24.21	18.97
TraesCS1B01G086000.1	Wheat	plastid	25.79	18.95
OQU82827	Sorghum	cytosol	29.96	18.95
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	29.56	18.93
TraesCS1B01G038500.1	Wheat	mitochondrion	29.56	18.86
TraesCS2D01G532600.1	Wheat	plastid	28.97	18.81
TraesCS1D01G056600.1	Wheat	mitochondrion	7.54	18.81
Os10t0495200-01	Rice	mitochondrion	29.17	18.8
TraesCS1B01G039200.1	Wheat	mitochondrion	29.17	18.75
TraesCS1B01G039700.1	Wheat	cytosol	22.62	18.75
TraesCS6B01G021600.1	Wheat	mitochondrion	26.59	18.72
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	12.7	18.71
OQU82823	Sorghum	cytosol	29.56	18.7
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	29.37	18.69
HORVU1Hr1G004750.6	Barley	plastid	29.56	18.67
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	24.4	18.66
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	26.39	18.63
OQU82856	Sorghum	cytosol	27.78	18.62
KXG35774	Sorghum	cytosol, mitochondrion	17.46	18.6
TraesCS1B01G072400.1	Wheat	cytosol	25.6	18.56
TraesCS6D01G017700.1	Wheat	plastid	19.64	18.54
OQU80148	Sorghum	mitochondrion	26.59	18.43
TraesCS1B01G039100.1	Wheat	mitochondrion	28.57	18.39
TraesCS6D01G047700.1	Wheat	mitochondrion	25.2	18.38
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	24.21	18.37
TraesCS2A01G526200.1	Wheat	golgi	24.8	18.36
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	25.99	18.32
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	25.99	18.32
TraesCS1B01G073100.1	Wheat	cytosol	22.02	18.32
TraesCS2B01G560700.1	Wheat	plastid	27.98	18.29
Zm00001d007534_P001	Maize	plastid	28.17	18.28
TraesCS6B01G114300.1	Wheat	cytosol	14.09	18.25
TraesCS2A01G530600.1	Wheat	cytosol	27.58	18.17
TraesCS2B01G559900.1	Wheat	cytosol	19.44	18.08
TraesCS6D01G017800.1	Wheat	cytosol	19.25	18.06
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	25.6	18.04
TraesCS1D01G068800.1	Wheat	plastid	29.17	18.01
Os10t0497300-01	Rice	mitochondrion	28.37	18.01
TraesCS2D01G532400.1	Wheat	cytosol	21.83	18.0
TraesCS2D01G532300.1	Wheat	plastid	27.78	17.99
TraesCS1A01G067600.1	Wheat	mitochondrion	28.97	17.96
TraesCS2D01G532500.1	Wheat	plastid	24.21	17.94
TraesCS2B01G560300.1	Wheat	cytosol	20.24	17.93
KXG28799	Sorghum	plastid	26.98	17.89
TraesCS1A01G054800.1	Wheat	cytosol	20.63	17.87
Os04t0349600-01	Rice	plastid	13.69	17.83
TraesCS1B01G085900.1	Wheat	mitochondrion	28.77	17.81
TraesCS1D01G055300.1	Wheat	cytosol	21.83	17.8
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	8.93	17.79
TraesCS1A01G054700.2	Wheat	mitochondrion	28.57	17.73
TraesCS1D01G056700.1	Wheat	cytosol	21.23	17.63
OQU82831	Sorghum	cytosol	21.43	17.62
Zm00001d009733_P001	Maize	cytosol	27.78	17.61
KXG19780	Sorghum	cytosol	20.63	17.6
TraesCS1A01G067400.1	Wheat	mitochondrion	28.77	17.58
TraesCS2A01G531100.1	Wheat	cytosol	19.84	17.57
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	27.18	17.56
HORVU1Hr1G010970.1	Barley	mitochondrion	28.77	17.55
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.22	17.53
EES07882	Sorghum	cytosol	26.98	17.5
TraesCS1A01G054500.1	Wheat	mitochondrion	26.98	17.44
TraesCS1B01G075300.1	Wheat	cytosol	20.63	17.42
TraesCS2D01G532100.1	Wheat	mitochondrion	23.81	17.34
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	28.37	17.23
HORVU0Hr1G031920.1	Barley	plastid	29.37	17.21
Zm00001d007548_P001	Maize	plastid	27.78	17.2
TraesCS1B01G085400.1	Wheat	cytosol	21.83	17.16
Zm00001d007559_P001	Maize	plastid	27.78	17.14
TraesCS1D01G068400.1	Wheat	mitochondrion	27.98	17.13
Zm00001d007555_P001	Maize	plastid	27.58	17.08
TraesCS1D01G068900.1	Wheat	mitochondrion	27.38	16.97
Zm00001d007531_P001	Maize	plastid	27.38	16.95
TraesCS1B01G071600.1	Wheat	mitochondrion	28.37	16.86
TraesCS1D01G056200.1	Wheat	mitochondrion	27.58	16.85
HORVU1Hr1G010890.5	Barley	cytosol	29.96	16.82
HORVU1Hr1G014040.1	Barley	mitochondrion	27.78	16.81
TraesCS1D01G068500.1	Wheat	mitochondrion	26.98	16.75
HORVU1Hr1G011300.3	Barley	plastid	30.56	16.74
TraesCS1A01G057300.1	Wheat	cytosol	23.81	16.71
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	23.02	16.64
HORVU6Hr1G076780.7	Barley	mitochondrion	27.18	16.63
TraesCS1B01G072900.2	Wheat	mitochondrion	28.77	16.61
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	25.2	16.58
TraesCS1D01G076900.1	Wheat	plastid	21.43	16.44
HORVU1Hr1G011160.2	Barley	cytosol, plastid	29.17	16.42
TraesCS6A01G311600.1	Wheat	mitochondrion	27.18	16.39
TraesCS1A01G055800.1	Wheat	mitochondrion	25.0	16.34
TraesCS1B01G092500.1	Wheat	mitochondrion	25.2	16.22
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	21.63	16.2
Os10t0497432-01	Rice	mitochondrion	8.53	16.17
HORVU1Hr1G013810.1	Barley	plastid	26.79	16.09
HORVU1Hr1G011150.1	Barley	cytosol, plastid	28.17	16.08
TraesCS1D01G076500.1	Wheat	mitochondrion	21.03	15.96
TraesCS1A01G067000.1	Wheat	mitochondrion	22.62	15.92
OQU82836	Sorghum	cytosol	19.25	15.85
TraesCS1B01G085300.1	Wheat	mitochondrion	24.8	15.78
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	22.42	15.76
TraesCS6A01G014600.1	Wheat	cytosol	12.3	15.7
Os08t0110200-01	Rice	mitochondrion	24.8	15.66
TraesCS1B01G073200.1	Wheat	cytosol	9.33	15.51
HORVU6Hr1G002890.6	Barley	cytosol, plastid	24.4	15.47
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	6.94	15.35
HORVU1Hr1G014060.1	Barley	plastid	26.59	15.06
TraesCS1A01G074000.1	Wheat	mitochondrion	8.33	14.84
TraesCS1A01G055500.1	Wheat	mitochondrion	6.35	14.75
Zm00001d009735_P001	Maize	cytosol	27.38	14.18
Os04t0351333-00	Rice	cytosol	24.6	14.11
OQU82834	Sorghum	cytosol	26.59	13.91
TraesCS1D01G068700.1	Wheat	cytosol	11.9	13.67
OQU82833	Sorghum	cytosol	12.1	13.62
TraesCS1A01G066600.1	Wheat	mitochondrion	6.94	13.31
TraesCS1B01G084800.1	Wheat	cytosol	11.9	12.93
TraesCS1D01G076700.1	Wheat	cytosol	8.53	12.87
TraesCS1A01G073700.1	Wheat	cytosol	9.72	12.73
TraesCS1D01G058500.1	Wheat	plastid	14.09	12.46
TraesCS6B01G129100.1	Wheat	cytosol, plastid	6.94	12.15
TraesCS1B01G038300.1	Wheat	plastid	13.1	12.09
TraesCS1A01G056000.1	Wheat	cytosol	9.52	11.94
TraesCS1A01G073600.1	Wheat	mitochondrion	9.13	11.73
TraesCS6B01G341800.2	Wheat	cytosol	9.13	11.53
TraesCS1D01G033000.1	Wheat	cytosol	9.13	11.39
HORVU1Hr1G011400.44	Barley	plastid	13.69	11.2
TraesCS1B01G038600.1	Wheat	cytosol	7.74	10.74
OQU88581	Sorghum	cytosol	20.83	9.66
TraesCS1D01G076400.1	Wheat	cytosol	6.94	9.64
TraesCS1A01G067800.1	Wheat	cytosol	7.14	9.63
TraesCS1D01G067600.1	Wheat	cytosol	6.94	9.59
TraesCS1A01G055600.1	Wheat	cytosol	4.56	7.08
TraesCS2D01G532200.1	Wheat	cytosol	3.97	6.83
TraesCS1D01G057700.1	Wheat	cytosol	4.37	6.77

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:831526	ProteinID:AED92321.1	EMBL:AK228701	ArrayExpress:AT5G16640
EnsemblPlantsGene:AT5G16640	RefSeq:AT5G16640	TAIR:AT5G16640	RefSeq:AT5G16640-TAIR-G	EnsemblPlants:AT5G16640.1	TAIR:AT5G16640.1
Unigene:At.31655	ProteinID:BAB10191.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0006397	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0016787	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	GO:GO:0080156	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	RefSeq:NP_197167.1	PFAM:PF13041	PO:PO:0000037	PO:PO:0001054
PO:PO:0001081	PO:PO:0004507	PO:PO:0007057	PO:PO:0007611	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0025022	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1649	InterPro:Pentatricopeptide_repeat	UniProt:Q9FMD3
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00000AAD1A	SEG:seg	:	:

Description

Pentatricopeptide repeat-containing protein At5g16640, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FMD3]

Coordinates

chr5:+:5460921..5463017

Molecular Weight (calculated)

57214.2 Da

IEP (calculated)

7.909

GRAVY (calculated)

0.031

Length

504 amino acids

Sequence
(BLAST)

001: MRRSISSKAK SFLHRNLLYS GNSGTSPSSS FSICGFCFSR RAYSNGSDYR EMLRNGIRFM KLDDSLDLFF HMVQCRPLPS IADFSRLLSA ISKMKKYDVV
101: IYLWEQMQML GIPHNLCTCN ILLNCFCRCS QLSLALSFLG KMIKLGHEPS IVTFGSLLNG FCRGDRVYDA LYMFDQMVGM GYKPNVVIYN TIIDGLCKSK
201: QVDNALDLLN RMEKDGIGPD VVTYNSLISG LCSSGRWSDA TRMVSCMTKR EIYPDVFTFN ALIDACVKEG RVSEAEEFYE EMIRRSLDPD IVTYSLLIYG
301: LCMYSRLDEA EEMFGFMVSK GCFPDVVTYS ILINGYCKSK KVEHGMKLFC EMSQRGVVRN TVTYTILIQG YCRAGKLNVA EEIFRRMVFC GVHPNIITYN
401: VLLHGLCDNG KIEKALVILA DMQKNGMDAD IVTYNIIIRG MCKAGEVADA WDIYCSLNCQ GLMPDIWTYT TMMLGLYKKG LRREADALFR KMKEDGILPN
501: ECYV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.