CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	EER91265	AT4G26630.1	25387881
AT1G62670.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82832	Sorghum	cytosol	25.8	67.83
EES07882	Sorghum	cytosol	57.31	55.47
OQU82823	Sorghum	cytosol	58.24	54.96
KXG27690	Sorghum	cytosol, plastid	53.06	54.58
OQU82827	Sorghum	cytosol	57.85	54.58
KXG19780	Sorghum	cytosol	41.62	52.96
OQU80148	Sorghum	mitochondrion	50.93	52.68
Os10t0501700-00	Rice	cytosol	31.78	52.64
OQU82836	Sorghum	cytosol	42.69	52.45
Os10t0495100-01	Rice	cytosol, mitochondrion	31.78	51.84
Os10t0497366-00	Rice	mitochondrion	27.39	51.37
OQU82831	Sorghum	cytosol	40.82	50.08
EES09203	Sorghum	cytosol	53.06	50.0
Os08t0248400-01	Rice	mitochondrion	28.72	49.09
Os08t0107800-01	Rice	mitochondrion	39.89	48.08
OQU88594	Sorghum	cytosol	33.11	47.7
Os10t0497432-01	Rice	mitochondrion	16.36	46.24
EER95949	Sorghum	mitochondrion	39.36	44.65
Os10t0499500-01	Rice	mitochondrion	29.65	44.07
KXG34536	Sorghum	mitochondrion	33.11	43.53
Os08t0107700-01	Rice	cytosol, mitochondrion	21.14	42.51
OQU82834	Sorghum	cytosol	53.72	41.95
Os10t0495200-01	Rice	mitochondrion	42.95	41.3
OQU82833	Sorghum	cytosol	24.07	40.4
Os10t0497300-01	Rice	mitochondrion	42.42	40.18
Os08t0110200-01	Rice	mitochondrion	39.36	37.09
KRH40513	Soybean	plastid	15.69	33.62
KXG28799	Sorghum	plastid	33.91	33.55
Solyc06g007280.2.1	Tomato	cytosol	11.04	32.55
Bra027636.1-P	Field mustard	cytosol	13.7	31.79
Bra036649.1-P	Field mustard	cytosol	16.36	31.46
KXG35774	Sorghum	cytosol, mitochondrion	19.41	30.87
KRH39057	Soybean	cytosol	20.35	30.78
KRH39004	Soybean	cytosol	20.21	30.58
KRH39054	Soybean	cytosol	20.21	30.58
Solyc06g005220.2.1	Tomato	cytosol	16.49	30.54
Bra026882.1-P	Field mustard	cytosol	21.68	30.52
Bra026884.1-P	Field mustard	cytosol	18.62	30.5
VIT_12s0028g02320.t01	Wine grape	mitochondrion	19.28	30.4
KRH39074	Soybean	cytosol	20.08	30.38
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	21.14	30.29
Bra027029.1-P	Field mustard	mitochondrion	9.71	30.04
KRH39072	Soybean	cytosol	19.81	30.04
KRH39112	Soybean	cytosol	19.55	29.58
Bra006187.1-P	Field mustard	plastid	11.44	29.55
AT1G63330.2	Thale cress	cytosol	21.94	29.52
KRH09084	Soybean	plastid	19.95	29.35
VIT_14s0081g00110.t01	Wine grape	cytosol	19.15	29.33
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	19.55	29.11
KRH39050	Soybean	mitochondrion	20.48	28.95
AT1G63400.1	Thale cress	cytosol, plastid	22.21	28.94
AT1G62914.1	Thale cress	mitochondrion	20.21	28.79
AT1G63130.1	Thale cress	mitochondrion	24.07	28.73
AT1G12300.1	Thale cress	mitochondrion	24.34	28.73
AT1G12620.1	Thale cress	cytosol, mitochondrion	23.67	28.66
KRH08636	Soybean	cytosol	19.81	28.54
AT1G62930.1	Thale cress	plastid	23.8	28.46
KRH48615	Soybean	mitochondrion	20.61	28.44
Bra021192.1-P	Field mustard	plastid	19.02	28.37
AT1G63080.3	Thale cress	mitochondrion	23.14	28.34
VIT_14s0081g00120.t01	Wine grape	plastid	21.94	28.3
Bra026971.1-P	Field mustard	mitochondrion	23.67	28.3
AT1G62670.1	Thale cress	mitochondrion	23.67	28.25
AT3G16710.1	Thale cress	mitochondrion	19.02	28.21
AT1G63070.1	Thale cress	mitochondrion	22.07	28.14
AT1G62720.1	Thale cress	mitochondrion	18.09	28.04
PGSC0003DMT400052977	Potato	cytosol	14.49	28.02
Bra016762.1-P	Field mustard	mitochondrion	22.61	28.01
KRH08639	Soybean	mitochondrion, plastid	21.01	27.96
Bra028267.1-P	Field mustard	mitochondrion	23.27	27.96
Bra026958.1-P	Field mustard	mitochondrion	23.67	27.94
KRH39066	Soybean	cytosol	20.61	27.93
KRH08628	Soybean	plastid	20.48	27.9
KRH08607	Soybean	cytosol	20.74	27.81
AT5G16640.1	Thale cress	mitochondrion	18.62	27.78
VIT_14s0081g00270.t01	Wine grape	plastid	21.28	27.59
AT1G62910.1	Thale cress	mitochondrion	23.14	27.53
AT3G22470.1	Thale cress	cytosol, mitochondrion	22.61	27.46
KRH31646	Soybean	cytosol	18.88	27.41
KRH41817	Soybean	mitochondrion	20.21	27.39
Bra026954.1-P	Field mustard	mitochondrion	23.67	27.38
KRH08277	Soybean	plastid	20.61	27.34
KRH08625	Soybean	plastid	20.88	27.26
KRH09154	Soybean	mitochondrion	20.08	27.16
PGSC0003DMT400008757	Potato	cytosol	17.95	27.11
Bra025516.1-P	Field mustard	cytosol, mitochondrion	17.15	27.04
KRH09121	Soybean	mitochondrion	19.15	26.97
Bra036651.1-P	Field mustard	mitochondrion	19.15	26.92
AT1G62590.1	Thale cress	mitochondrion	22.61	26.81
KRH40400	Soybean	plastid	20.48	26.69
Bra026836.1-P	Field mustard	cytosol, mitochondrion	17.42	26.68
AT1G12775.1	Thale cress	cytosol, mitochondrion	22.74	26.55
AT1G63150.1	Thale cress	mitochondrion	22.21	26.55
KRH08671	Soybean	cytosol, mitochondrion	19.41	26.4
AT1G64580.1	Thale cress	mitochondrion	18.35	26.39
Bra027026.1-P	Field mustard	mitochondrion	18.35	26.39
PGSC0003DMT400008759	Potato	cytosol	11.17	26.33
KRH25652	Soybean	cytosol, golgi	18.88	26.3
VIT_14s0081g00280.t01	Wine grape	mitochondrion	22.34	26.29
PGSC0003DMT400025074	Potato	cytosol	19.28	26.27
AT1G62680.2	Thale cress	plastid	19.02	26.09
KRH17148	Soybean	mitochondrion	18.88	26.05
Bra031731.1-P	Field mustard	mitochondrion	17.55	25.98
AT1G12700.2	Thale cress	cytosol	21.14	25.73
VIT_14s0030g02280.t01	Wine grape	plastid	19.15	25.67
KRH09095	Soybean	plastid	19.95	25.64
AT5G41170.1	Thale cress	mitochondrion	17.95	25.62
KRH09097	Soybean	plastid	19.81	25.56
KRH09082	Soybean	cytosol	13.83	25.49
Solyc06g007740.1.1	Tomato	cytosol	19.95	25.42
PGSC0003DMT400025067	Potato	cytosol	16.09	25.42
Solyc06g007300.1.1	Tomato	extracellular	19.95	25.34
PGSC0003DMT400025087	Potato	endoplasmic reticulum	16.62	25.25
Bra027658.1-P	Field mustard	cytosol, mitochondrion	18.22	25.23
PGSC0003DMT400008760	Potato	mitochondrion	19.55	25.09
AT1G64583.1	Thale cress	mitochondrion	17.02	25.0
Solyc04g080120.1.1	Tomato	extracellular	20.21	24.84
PGSC0003DMT400056665	Potato	mitochondrion	19.41	24.79
PGSC0003DMT400015293	Potato	mitochondrion	20.08	24.75
PGSC0003DMT400015298	Potato	mitochondrion	20.08	24.75
AT1G06580.1	Thale cress	mitochondrion	16.36	24.6
Bra026957.1-P	Field mustard	mitochondrion	19.41	24.21
PGSC0003DMT400053556	Potato	mitochondrion	14.76	24.18
PGSC0003DMT400056663	Potato	plastid	18.88	24.15
PGSC0003DMT400053185	Potato	mitochondrion	18.88	24.07
PGSC0003DMT400052971	Potato	mitochondrion	18.75	23.78
AT4G26800.2	Thale cress	mitochondrion, plastid	16.22	23.74
Solyc06g007810.1.1	Tomato	cytosol	8.11	22.76
KRH08599	Soybean	cytosol, plastid	20.21	22.72
Bra027726.1-P	Field mustard	mitochondrion	14.23	22.72
Bra026401.1-P	Field mustard	plastid	16.09	22.62
CDX68679	Canola	cytosol	3.46	22.61
PGSC0003DMT400053182	Potato	cytosol	17.29	21.7
AT1G64100.2	Thale cress	cytosol	22.61	21.09
VIT_14s0030g02260.t01	Wine grape	cytosol	12.37	20.99
KRH09085	Soybean	mitochondrion	19.55	20.88
Bra027656.1-P	Field mustard	cytosol	24.73	19.77
OQU88581	Sorghum	cytosol	27.39	18.95
KRH12873	Soybean	cytosol	15.43	16.67
KRH39064	Soybean	cytosol	20.74	16.1
Bra016758.1-P	Field mustard	plastid	23.54	15.27

Protein Annotations

EnsemblPlants:OQU82856	EnsemblPlantsGene:SORBI_3005G030850	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1649
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	ProteinID:OQU82856	ProteinID:OQU82856.1
SEG:seg	TIGRFAMs:TIGR00756	UniParc:UPI000B8B9EC8	UniProt:A0A1Z5RHM2	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr5:-:2756943..2765933

Molecular Weight (calculated)

83668.1 Da

IEP (calculated)

7.581

GRAVY (calculated)

-0.031

Length

752 amino acids

Sequence
(BLAST)

001: MSGAHARELE RAAIGRARSG NLGLHDALKL FDELLLHARP ASVRALNQLL SVVSRAKCSS SSKLAVSRFN RMLRDCSNKV APDCCTYSIV IGCFCRIGRL
101: ELGFAAFGLI LKTGWRVDDI VVNQLLKGLC DTKRVGEAMH VLLRQMPEVG CRLGVVSYNT LLKGLCDRRR AEEARELLHM MVDGQDSSCS PDVVSYNIVI
201: NGFFNEGQVD KAYSLFLEMG VSPDVVTYNT IIDGLCKAQE VDRAEDVFQQ MVEKGVKPNN VTYNTIIDGL CKAQEVDMAE GVFQKMVDKG VKPSNVTYNT
301: IIDGLCKAQA VDRAEGVFQQ MIDRGVKPDH VTYNTIIDGL CKAQAIDKAE GVFQQMIDKG VKPDNLTYTI IIDGLCKAQS VDRAEGVFQQ MIDKGVKPNN
401: GTYNCLIHGY LSTGQWEEVV QRIKEMSAHD LEPDVFTYGL LLDYLCKNGK CNEARSLFDS MIRKGIKPSV TIYGIMLHGY GKKGALSEMH DLLNLMVANG
501: ISPNHRIFNT VICAYAKRAM IDEVMHIFIK MKQQGLSPNV VTYGTLIDAL CKLGRVDDAV LQFNQMINEG VTPNNVVFNS LVYGLCTVDK WEKVEELFLE
601: MLNQGIRPDI VFFNTVLCNL CKEGRVMEAR RLIDSMVCMG LKPDVISYNT LIDGHCFASR MDEAVKLLDG MVSAGLKPNI VSYNTLLHGY CKAGRIDNAY
701: CLFREMLRKG VTPGVETYNT ILNGLFRSGR FSEARELYVN MIKKPLFYGS ST

Best Arabidopsis Sequence Match ( AT5G65560.1 )
(BLAST)

001: MIRRIQPRCN SGLTGSVSAF EVLKKKFSTD VTVPSPVTRR QFCSVSPLLR NLPEEESDSM SVPHRLLSIL SKPNWHKSPS LKSMVSAISP SHVSSLFSLD
101: LDPKTALNFS HWISQNPRYK HSVYSYASLL TLLINNGYVG VVFKIRLLMI KSCDSVGDAL YVLDLCRKMN KDERFELKYK LIIGCYNTLL NSLARFGLVD
201: EMKQVYMEML EDKVCPNIYT YNKMVNGYCK LGNVEEANQY VSKIVEAGLD PDFFTYTSLI MGYCQRKDLD SAFKVFNEMP LKGCRRNEVA YTHLIHGLCV
301: ARRIDEAMDL FVKMKDDECF PTVRTYTVLI KSLCGSERKS EALNLVKEME ETGIKPNIHT YTVLIDSLCS QCKFEKAREL LGQMLEKGLM PNVITYNALI
401: NGYCKRGMIE DAVDVVELME SRKLSPNTRT YNELIKGYCK SNVHKAMGVL NKMLERKVLP DVVTYNSLID GQCRSGNFDS AYRLLSLMND RGLVPDQWTY
501: TSMIDSLCKS KRVEEACDLF DSLEQKGVNP NVVMYTALID GYCKAGKVDE AHLMLEKMLS KNCLPNSLTF NALIHGLCAD GKLKEATLLE EKMVKIGLQP
601: TVSTDTILIH RLLKDGDFDH AYSRFQQMLS SGTKPDAHTY TTFIQTYCRE GRLLDAEDMM AKMRENGVSP DLFTYSSLIK GYGDLGQTNF AFDVLKRMRD
701: TGCEPSQHTF LSLIKHLLEM KYGKQKGSEP ELCAMSNMME FDTVVELLEK MVEHSVTPNA KSYEKLILGI CEVGNLRVAE KVFDHMQRNE GISPSELVFN
801: ALLSCCCKLK KHNEAAKVVD DMICVGHLPQ LESCKVLICG LYKKGEKERG TSVFQNLLQC GYYEDELAWK IIIDGVGKQG LVEAFYELFN VMEKNGCKFS
901: SQTYSLLIEG PPDST

Arabidopsis Description

Pentatricopeptide repeat-containing protein At5g65560 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.