Factsheet for AT1G63080.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G63330.2	Thale cress	cytosol	72.64	79.79
AT1G63400.1	Thale cress	cytosol, plastid	74.43	79.2
AT1G63070.1	Thale cress	mitochondrion	75.08	78.14
AT1G62910.1	Thale cress	mitochondrion	79.97	77.69
AT1G62914.1	Thale cress	mitochondrion	66.78	77.65
AT1G63130.1	Thale cress	mitochondrion	79.64	77.62
AT1G62930.1	Thale cress	plastid	78.99	77.11
AT1G62670.1	Thale cress	mitochondrion	78.66	76.67
AT1G62590.1	Thale cress	mitochondrion	76.55	74.13
CDY34688	Canola	cytosol	42.18	71.55
AT1G63150.1	Thale cress	mitochondrion	73.29	71.54
CDY34375	Canola	mitochondrion	59.61	70.79
Bra027658.1-P	Field mustard	cytosol, mitochondrion	60.42	68.32
CDY25522	Canola	mitochondrion, plastid	45.6	62.64
AT1G62680.2	Thale cress	plastid	50.33	56.39
AT1G64580.1	Thale cress	mitochondrion	47.39	55.64
AT5G16640.1	Thale cress	mitochondrion	45.11	54.96
AT1G62720.1	Thale cress	mitochondrion	42.67	54.02
AT5G41170.1	Thale cress	mitochondrion	45.77	53.32
AT3G22470.1	Thale cress	cytosol, mitochondrion	53.26	52.83
AT1G12300.1	Thale cress	mitochondrion	54.23	52.28
AT1G12620.1	Thale cress	cytosol, mitochondrion	52.61	52.01
AT1G06580.1	Thale cress	mitochondrion	42.02	51.6
AT3G16710.1	Thale cress	mitochondrion	42.51	51.48
AT1G12775.1	Thale cress	cytosol, mitochondrion	53.58	51.09
AT1G12700.2	Thale cress	cytosol	50.16	49.84
AT1G64583.1	Thale cress	mitochondrion	40.23	48.24
AT4G26800.2	Thale cress	mitochondrion, plastid	38.27	45.72
VIT_12s0028g02320.t01	Wine grape	mitochondrion	35.5	45.7
VIT_14s0081g00110.t01	Wine grape	cytosol	33.39	41.75
VIT_14s0081g00270.t01	Wine grape	plastid	38.6	40.86
VIT_14s0081g00120.t01	Wine grape	plastid	37.95	39.97
Solyc06g007280.2.1	Tomato	cytosol	16.29	39.22
KRH70370	Soybean	cytosol	33.71	38.05
VIT_14s0030g02280.t01	Wine grape	plastid	34.53	37.79
Solyc06g005220.2.1	Tomato	cytosol	24.76	37.44
AT1G64100.2	Thale cress	cytosol	49.02	37.34
VIT_14s0081g00280.t01	Wine grape	mitochondrion	38.6	37.09
KRH49698	Soybean	cytosol	34.36	37.02
PGSC0003DMT400008757	Potato	cytosol	29.97	36.95
KRH75045	Soybean	mitochondrion	35.67	36.68
PGSC0003DMT400008759	Potato	cytosol	19.06	36.68
KRH75063	Soybean	mitochondrion, plastid	35.99	36.59
PGSC0003DMT400052977	Potato	cytosol	23.13	36.5
KRH75048	Soybean	mitochondrion	35.99	36.35
KRH42744	Soybean	mitochondrion	35.99	36.17
KRH58843	Soybean	nucleus	35.83	36.01
KRH38755	Soybean	mitochondrion	34.69	35.86
KRH09256	Soybean	mitochondrion	32.57	35.78
PGSC0003DMT400025074	Potato	cytosol	31.92	35.51
PGSC0003DMT400008760	Potato	mitochondrion	33.55	35.15
PGSC0003DMT400025087	Potato	endoplasmic reticulum	28.34	35.15
Solyc06g007300.1.1	Tomato	extracellular	33.55	34.8
PGSC0003DMT400056665	Potato	mitochondrion	33.06	34.47
Solyc06g007740.1.1	Tomato	cytosol	33.06	34.41
PGSC0003DMT400025067	Potato	cytosol	26.38	34.03
PGSC0003DMT400056663	Potato	plastid	32.25	33.67
Solyc06g007810.1.1	Tomato	cytosol	14.66	33.58
PGSC0003DMT400053185	Potato	mitochondrion	32.25	33.56
PGSC0003DMT400052971	Potato	mitochondrion	31.6	32.72
Zm00001d018982_P001	Maize	mitochondrion	18.57	32.57
PGSC0003DMT400015293	Potato	mitochondrion	31.76	31.97
PGSC0003DMT400015298	Potato	mitochondrion	31.76	31.97
VIT_14s0030g02260.t01	Wine grape	cytosol	22.8	31.6
Solyc04g080120.1.1	Tomato	extracellular	31.27	31.37
HORVU1Hr1G018190.2	Barley	cytosol	14.5	31.23
PGSC0003DMT400053556	Potato	mitochondrion	23.29	31.15
PGSC0003DMT400053182	Potato	cytosol	30.13	30.88
OQU82832	Sorghum	cytosol	14.33	30.77
HORVU6Hr1G017870.2	Barley	mitochondrion	14.66	30.0
TraesCS1A01G067700.1	Wheat	extracellular	16.45	29.97
Os10t0495100-01	Rice	cytosol, mitochondrion	22.48	29.93
TraesCS2B01G126900.1	Wheat	cytosol	18.24	29.32
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.17	29.29
Os10t0499500-01	Rice	mitochondrion	23.78	28.85
Os08t0248400-01	Rice	mitochondrion	20.52	28.64
TraesCS6B01G127200.1	Wheat	cytosol	15.96	28.49
TraesCS6D01G083300.1	Wheat	mitochondrion	20.68	28.48
Os10t0501700-00	Rice	cytosol	20.68	27.97
TraesCSU01G089800.1	Wheat	mitochondrion	15.96	27.92
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	22.8	27.83
Os08t0107700-01	Rice	cytosol, mitochondrion	16.78	27.54
TraesCS6A01G015000.1	Wheat	mitochondrion	18.57	27.47
HORVU1Hr1G011250.1	Barley	cytosol	13.19	27.46
TraesCS7D01G231400.1	Wheat	cytosol, plastid	17.92	27.3
Os10t0497366-00	Rice	mitochondrion	17.75	27.18
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	14.33	27.08
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	21.34	27.07
OQU88594	Sorghum	cytosol	22.96	27.01
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	16.61	26.98
TraesCSU01G089700.1	Wheat	mitochondrion	21.17	26.97
TraesCSU01G090200.1	Wheat	cytosol	19.06	26.47
TraesCS1D01G058000.1	Wheat	cytosol	17.43	26.35
EER95949	Sorghum	mitochondrion	28.34	26.24
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	21.5	26.14
TraesCS6B01G127500.1	Wheat	cytosol	20.85	26.12
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	21.66	26.03
Os10t0497432-01	Rice	mitochondrion	11.24	25.94
TraesCS6D01G083400.1	Wheat	mitochondrion	20.68	25.76
KXG34536	Sorghum	mitochondrion	23.94	25.7
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	19.87	25.36
Os08t0107800-01	Rice	mitochondrion	25.73	25.32
TraesCS1A01G073800.1	Wheat	mitochondrion	13.68	25.23
TraesCS6D01G083100.1	Wheat	cytosol	20.03	25.1
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	17.75	24.83
TraesCS6D01G076500.1	Wheat	plastid	18.24	24.72
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	17.43	24.71
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	10.1	24.51
TraesCS1D01G068600.1	Wheat	plastid	13.52	24.41
TraesCS1B01G072700.1	Wheat	cytosol	20.2	24.31
TraesCS1B01G073200.1	Wheat	cytosol	11.89	24.09
TraesCS1B01G072300.1	Wheat	plastid	22.15	23.94
TraesCS1B01G038200.1	Wheat	mitochondrion	24.59	23.85
TraesCS7B01G469500.1	Wheat	cytosol	21.66	23.67
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	14.5	23.48
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	18.24	23.33
Os10t0495200-01	Rice	mitochondrion	29.64	23.27
TraesCS1D01G057800.1	Wheat	mitochondrion	13.68	23.14
OQU82856	Sorghum	cytosol	28.34	23.14
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	12.87	23.1
EES07882	Sorghum	cytosol	29.15	23.04
TraesCS6D01G017800.1	Wheat	cytosol	20.03	22.91
TraesCS6D01G047700.1	Wheat	mitochondrion	25.73	22.87
OQU82823	Sorghum	cytosol	29.64	22.84
OQU82827	Sorghum	cytosol	29.64	22.84
KXG27690	Sorghum	cytosol, plastid	27.04	22.71
HORVU6Hr1G014310.1	Barley	mitochondrion	25.41	22.71
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	26.38	22.66
TraesCS6B01G021600.1	Wheat	mitochondrion	26.38	22.63
EES09203	Sorghum	cytosol	29.32	22.56
OQU82836	Sorghum	cytosol	22.48	22.55
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	26.22	22.52
TraesCS1B01G315500.1	Wheat	mitochondrion	11.73	22.43
Os10t0497300-01	Rice	mitochondrion	28.83	22.29
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	25.9	22.24
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	25.57	21.99
Os04t0349600-01	Rice	plastid	13.84	21.96
TraesCS1A01G031600.1	Wheat	cytosol	23.62	21.9
OQU80148	Sorghum	mitochondrion	25.73	21.73
TraesCS1A01G031700.1	Wheat	plastid	26.22	21.73
TraesCS1B01G086000.1	Wheat	plastid	24.27	21.72
KXG28799	Sorghum	plastid	26.87	21.71
TraesCS6D01G290900.1	Wheat	mitochondrion	25.9	21.69
TraesCS1A01G066600.1	Wheat	mitochondrion	9.28	21.67
TraesCS1B01G092600.1	Wheat	plastid	18.24	21.66
Zm00001d007555_P001	Maize	plastid	28.5	21.5
Zm00001d007531_P001	Maize	plastid	28.18	21.25
TraesCS1B01G038400.1	Wheat	cytosol	21.01	21.22
TraesCS2A01G531000.1	Wheat	golgi	23.45	21.21
TraesCS1A01G074000.1	Wheat	mitochondrion	9.77	21.2
TraesCS1B01G072400.1	Wheat	cytosol	23.94	21.15
Zm00001d007548_P001	Maize	plastid	28.01	21.13
TraesCS1D01G068800.1	Wheat	plastid	28.01	21.08
TraesCS6A01G083000.1	Wheat	cytosol	15.64	21.05
Zm00001d007559_P001	Maize	plastid	28.01	21.05
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.82	20.97
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	22.64	20.93
Zm00001d009733_P001	Maize	cytosol	27.04	20.88
Zm00001d007534_P001	Maize	plastid	26.38	20.85
TraesCS6B01G114300.1	Wheat	cytosol	13.19	20.82
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	22.31	20.79
OQU82831	Sorghum	cytosol	20.68	20.72
TraesCS1A01G067600.1	Wheat	mitochondrion	27.36	20.66
TraesCS1B01G039700.1	Wheat	cytosol	20.36	20.56
TraesCS1D01G056200.1	Wheat	mitochondrion	27.52	20.48
TraesCS1D01G068500.1	Wheat	mitochondrion	27.04	20.44
TraesCS1D01G056700.1	Wheat	cytosol	20.2	20.43
TraesCS1B01G085900.1	Wheat	mitochondrion	27.04	20.39
TraesCS1D01G055300.1	Wheat	cytosol	20.52	20.39
TraesCS1A01G054500.1	Wheat	mitochondrion	25.9	20.38
TraesCS1B01G038500.1	Wheat	mitochondrion	26.22	20.38
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	26.22	20.33
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	23.13	20.31
TraesCS2D01G532400.1	Wheat	cytosol	20.2	20.29
TraesCS2A01G526200.1	Wheat	golgi	22.48	20.26
TraesCS2D01G532600.1	Wheat	plastid	25.57	20.23
TraesCS1A01G054700.2	Wheat	mitochondrion	26.71	20.2
TraesCS1B01G039100.1	Wheat	mitochondrion	25.73	20.18
TraesCS2B01G560700.1	Wheat	plastid	25.24	20.1
TraesCS1A01G054800.1	Wheat	cytosol	19.06	20.1
KXG35774	Sorghum	cytosol, mitochondrion	15.47	20.08
TraesCS1D01G069100.1	Wheat	mitochondrion	21.01	20.06
TraesCS6D01G017700.1	Wheat	plastid	17.43	20.04
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	25.41	20.0
TraesCS1D01G058400.1	Wheat	cytosol	16.78	20.0
TraesCS2D01G532500.1	Wheat	plastid	22.15	20.0
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	25.57	19.95
TraesCS2D01G532300.1	Wheat	plastid	25.24	19.92
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	21.82	19.91
TraesCS1A01G067400.1	Wheat	mitochondrion	26.71	19.88
TraesCS1B01G085400.1	Wheat	cytosol	20.68	19.81
TraesCS1D01G068400.1	Wheat	mitochondrion	26.55	19.81
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	26.71	19.76
HORVU6Hr1G002890.6	Barley	cytosol, plastid	25.57	19.75
TraesCS2A01G530600.1	Wheat	cytosol	24.59	19.74
TraesCS1D01G076500.1	Wheat	mitochondrion	21.34	19.73
HORVU6Hr1G076780.7	Barley	mitochondrion	26.38	19.66
TraesCS1A01G055800.1	Wheat	mitochondrion	24.59	19.59
HORVU1Hr1G010970.1	Barley	mitochondrion	26.22	19.49
TraesCS1B01G073100.1	Wheat	cytosol	19.22	19.47
HORVU1Hr1G014040.1	Barley	mitochondrion	26.38	19.45
TraesCS1B01G085300.1	Wheat	mitochondrion	25.08	19.44
TraesCS6B01G129100.1	Wheat	cytosol, plastid	9.12	19.44
Os08t0110200-01	Rice	mitochondrion	25.24	19.42
HORVU0Hr1G035310.1	Barley	cytosol	18.4	19.42
TraesCS6A01G311600.1	Wheat	mitochondrion	26.38	19.38
TraesCS1A01G055500.1	Wheat	mitochondrion	6.84	19.35
TraesCS1D01G056600.1	Wheat	mitochondrion	6.35	19.31
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	7.17	19.3
TraesCS1B01G072900.2	Wheat	mitochondrion	27.36	19.24
TraesCS1D01G068900.1	Wheat	mitochondrion	25.41	19.19
HORVU0Hr1G031920.1	Barley	plastid	26.87	19.19
HORVU1Hr1G011150.1	Barley	cytosol, plastid	27.52	19.14
TraesCS1A01G067000.1	Wheat	mitochondrion	22.31	19.13
TraesCS1B01G039200.1	Wheat	mitochondrion	24.43	19.13
TraesCS1B01G071600.1	Wheat	mitochondrion	26.38	19.1
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	21.66	19.08
TraesCS2D01G532100.1	Wheat	mitochondrion	21.5	19.08
HORVU1Hr1G004750.6	Barley	plastid	24.76	19.05
KXG19780	Sorghum	cytosol	18.24	18.95
HORVU1Hr1G010890.5	Barley	cytosol	27.69	18.93
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	23.62	18.93
TraesCS1B01G092500.1	Wheat	mitochondrion	23.94	18.77
HORVU1Hr1G011160.2	Barley	cytosol, plastid	27.36	18.77
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	21.82	18.69
TraesCS1A01G057300.1	Wheat	cytosol	21.82	18.66
HORVU1Hr1G011300.3	Barley	plastid	27.69	18.48
HORVU1Hr1G013810.1	Barley	plastid	25.24	18.47
HORVU1Hr1G014060.1	Barley	plastid	26.71	18.43
TraesCS1A01G073600.1	Wheat	mitochondrion	11.73	18.37
TraesCS2A01G531100.1	Wheat	cytosol	16.78	18.1
TraesCS2B01G560300.1	Wheat	cytosol	16.61	17.93
TraesCS2B01G559900.1	Wheat	cytosol	15.8	17.9
TraesCS1B01G075300.1	Wheat	cytosol	17.26	17.76
OQU82834	Sorghum	cytosol	27.52	17.55
TraesCS1D01G076900.1	Wheat	plastid	18.73	17.5
TraesCS6A01G014600.1	Wheat	cytosol	11.07	17.22
Zm00001d009735_P001	Maize	cytosol	26.55	16.75
TraesCS1D01G076400.1	Wheat	cytosol	9.77	16.53
Os04t0351333-00	Rice	cytosol	23.29	16.27
TraesCS1D01G068700.1	Wheat	cytosol	11.56	16.17
TraesCS1D01G058500.1	Wheat	plastid	14.98	16.14
HORVU1Hr1G011400.44	Barley	plastid	15.47	15.42
OQU82833	Sorghum	cytosol	10.75	14.73
TraesCS1B01G084800.1	Wheat	cytosol	11.07	14.66
TraesCS1A01G073700.1	Wheat	cytosol	9.12	14.55
TraesCS6B01G341800.2	Wheat	cytosol	9.45	14.54
TraesCS1B01G038300.1	Wheat	plastid	12.87	14.47
TraesCS1D01G033000.1	Wheat	cytosol	9.45	14.36
TraesCS1A01G056000.1	Wheat	cytosol	9.12	13.93
TraesCS1B01G038600.1	Wheat	cytosol	7.98	13.5
TraesCS1D01G076700.1	Wheat	cytosol	7.33	13.47
TraesCS1D01G067600.1	Wheat	cytosol	7.98	13.42
TraesCS1A01G067800.1	Wheat	cytosol	7.65	12.57
OQU88581	Sorghum	cytosol	21.17	11.96
TraesCS1A01G055600.1	Wheat	cytosol	5.54	10.46
TraesCS1D01G057700.1	Wheat	cytosol	5.54	10.46
TraesCS2D01G532200.1	Wheat	cytosol	4.56	9.56

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:842611	ProteinID:AAG51614.1	ProteinID:AEE34051.1	EMBL:AK226724
ProteinID:ANM58874.1	ProteinID:ANM58875.1	ArrayExpress:AT1G63080	EnsemblPlantsGene:AT1G63080	RefSeq:AT1G63080	TAIR:AT1G63080
RefSeq:AT1G63080-TAIR-G	EnsemblPlants:AT1G63080.3	Unigene:At.64076	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006397
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0080156	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	RefSeq:NP_001319297.1	RefSeq:NP_001321279.1	RefSeq:NP_176496.1	PFAM:PF01535
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1649	InterPro:Pentatricopeptide_repeat
UniProt:Q9CAN5	SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000009DB1D	:

Description

Pentatricopeptide repeat-containing protein At1g63080, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN5]

Coordinates

chr1:-:23387631..23390823

Molecular Weight (calculated)

68852.1 Da

IEP (calculated)

7.217

GRAVY (calculated)

-0.025

Length

614 amino acids

Sequence
(BLAST)

001: MSLAKRFVHL RKASPSFCLR GIYFSGLSYD GYREKLSRNA LLHLKLDEAV DLFGEMVKSR PFPSIVEFSK LLSAIAKMKK FDLVISFGEK MEILGVSHNL
101: YTYNIMINCL CRRSQLSFAL AILGKMMKLG YGPSIVTLNS LLNGFCHGNR ISEAVALVDQ MVEMGYQPDT VTFTTLVHGL FQHNKASEAV ALVERMVVKG
201: CQPDLVTYGA VINGLCKRGE PDLALNLLNK MEKGKIEADV VIYSTVIDSL CKYRHVDDAL NLFTEMDNKG IRPDVFTYSS LISCLCNYGR WSDASRLLSD
301: MLERKINPNV VTFNSLIDAF AKEGKLIEAE KLFDEMIQRS IDPNIVTYNS LINGFCMHDR LDEAQQIFTL MVSKDCLPDV VTYNTLINGF CKAKKVVDGM
401: ELFRDMSRRG LVGNTVTYTT LIHGFFQASD CDNAQMVFKQ MVSDGVHPNI MTYNTLLDGL CKNGKLEKAM VVFEYLQKSK MEPDIYTYNI MSEGMCKAGK
501: VEDGWDLFCS LSLKGVKPDV IAYNTMISGF CKKGLKEEAY TLFIKMKEDG PLPDSGTYNT LIRAHLRDGD KAASAELIKE MRSCRFAGDA STYGLVTDML
601: HDGRLDKGFL EVLS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.