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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 3
  • cytosol 1
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 PGSC0003DMT400037344 AT4G26630.1 25387881
AT1G62670.1 PGSC0003DMT400057390 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400025067 Potato cytosol 89.9 93.49
PGSC0003DMT400008759 Potato cytosol 46.26 71.79
PGSC0003DMT400052977 Potato cytosol 56.36 71.72
PGSC0003DMT400008757 Potato cytosol 68.69 68.27
PGSC0003DMT400025074 Potato cytosol 75.35 67.57
PGSC0003DMT400056665 Potato mitochondrion 75.76 63.67
PGSC0003DMT400056663 Potato plastid 74.34 62.59
PGSC0003DMT400053185 Potato mitochondrion 73.94 62.03
PGSC0003DMT400008760 Potato mitochondrion 73.13 61.77
PGSC0003DMT400052971 Potato mitochondrion 73.74 61.55
PGSC0003DMT400053556 Potato mitochondrion 55.35 59.7
PGSC0003DMT400053182 Potato cytosol 69.9 57.76
PGSC0003DMT400015293 Potato mitochondrion 52.73 42.79
PGSC0003DMT400015298 Potato mitochondrion 52.73 42.79
VIT_12s0028g02320.t01 Wine grape mitochondrion 37.17 38.57
VIT_14s0081g00110.t01 Wine grape cytosol 38.18 38.49
Bra027029.1-P Field mustard mitochondrion 18.38 37.45
CDY51169 Canola cytosol 31.72 37.12
CDY16110 Canola extracellular 30.3 36.59
CDY39810 Canola cytosol 28.69 36.32
CDY46909 Canola mitochondrion 21.21 35.96
CDY03257 Canola cytosol 28.28 35.81
VIT_14s0081g00270.t01 Wine grape plastid 41.82 35.69
CDY09968 Canola cytosol 21.01 35.37
Bra036649.1-P Field mustard cytosol 27.88 35.29
Bra027636.1-P Field mustard cytosol 23.03 35.19
CDY06217 Canola cytosol 20.81 35.15
CDY26589 Canola cytosol 4.85 34.78
CDX71969 Canola cytosol 27.68 34.6
CDY16031 Canola cytosol 21.62 34.41
VIT_14s0081g00120.t01 Wine grape plastid 40.4 34.31
Bra006187.1-P Field mustard plastid 19.8 33.68
Bra026884.1-P Field mustard cytosol 31.11 33.55
KRH70370 Soybean cytosol 36.77 33.46
CDY16002 Canola cytosol 21.01 33.44
CDY26588 Canola extracellular 21.62 33.02
CDX67634 Canola cytosol 28.08 32.86
CDY26607 Canola cytosol 30.3 32.82
VIT_14s0081g00280.t01 Wine grape mitochondrion 41.41 32.08
Bra026882.1-P Field mustard cytosol 34.55 32.02
KRH49698 Soybean cytosol 36.77 31.93
VIT_14s0030g02280.t01 Wine grape plastid 36.16 31.91
CDY34688 Canola cytosol 23.23 31.77
AT1G12700.2 Thale cress cytosol 39.19 31.39
AT1G63330.2 Thale cress cytosol 35.35 31.31
CDY35831 Canola mitochondrion 32.32 31.07
VIT_14s0030g02260.t01 Wine grape cytosol 27.68 30.93
Bra031731.1-P Field mustard mitochondrion 31.72 30.91
AT3G22470.1 Thale cress cytosol, mitochondrion 38.59 30.86
KRH75045 Soybean mitochondrion 37.17 30.82
KRH38755 Soybean mitochondrion 36.97 30.81
CDY00489 Canola mitochondrion 36.36 30.72
KRH09256 Soybean mitochondrion 34.55 30.59
CDY33797 Canola mitochondrion 31.52 30.47
Bra026957.1-P Field mustard mitochondrion 36.97 30.35
KRH75063 Soybean mitochondrion, plastid 36.77 30.13
CDY08386 Canola cytosol 27.07 30.11
KRH75048 Soybean mitochondrion 36.97 30.1
CDY16033 Canola cytosol 9.09 30.0
AT5G16640.1 Thale cress mitochondrion 30.51 29.96
KRH58843 Soybean nucleus 36.97 29.95
Bra026958.1-P Field mustard mitochondrion 38.38 29.83
KRH42744 Soybean mitochondrion 36.77 29.79
Bra028267.1-P Field mustard mitochondrion 37.58 29.71
CDY34969 Canola mitochondrion 30.3 29.64
CDY34375 Canola mitochondrion 30.91 29.59
AT1G12620.1 Thale cress cytosol, mitochondrion 36.97 29.47
AT1G62670.1 Thale cress mitochondrion 37.37 29.37
Bra021192.1-P Field mustard plastid 29.9 29.37
Bra025516.1-P Field mustard cytosol, mitochondrion 28.28 29.35
CDY26565 Canola mitochondrion 33.54 29.17
AT1G62910.1 Thale cress mitochondrion 37.17 29.11
CDY48949 Canola mitochondrion 28.28 29.11
CDY26593 Canola cytosol 35.76 29.06
AT1G62930.1 Thale cress plastid 36.77 28.93
CDX69436 Canola plastid 29.09 28.92
Bra027658.1-P Field mustard cytosol, mitochondrion 31.72 28.91
CDY31272 Canola mitochondrion 33.13 28.87
AT1G63130.1 Thale cress mitochondrion 36.57 28.73
CDY46394 Canola mitochondrion 27.88 28.69
AT1G62720.1 Thale cress mitochondrion 28.08 28.66
Bra026971.1-P Field mustard mitochondrion 36.36 28.62
AT1G12300.1 Thale cress mitochondrion 36.77 28.57
Bra016762.1-P Field mustard mitochondrion 34.95 28.5
CDY68929 Canola mitochondrion 34.95 28.5
AT1G63150.1 Thale cress mitochondrion 36.16 28.46
AT1G63080.3 Thale cress mitochondrion 35.15 28.34
Bra026836.1-P Field mustard cytosol, mitochondrion 28.08 28.31
CDY49646 Canola mitochondrion 28.48 28.14
Bra027026.1-P Field mustard mitochondrion 29.7 28.11
CDY25492 Canola mitochondrion 27.88 28.11
AT1G62680.2 Thale cress plastid 31.11 28.1
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 31.11 28.05
Bra026954.1-P Field mustard mitochondrion 36.77 28.0
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 16.77 27.95
CDY33753 Canola mitochondrion 25.05 27.93
Bra036651.1-P Field mustard mitochondrion 30.1 27.85
AT1G63070.1 Thale cress mitochondrion 33.13 27.8
AT1G62590.1 Thale cress mitochondrion 35.56 27.76
AT3G16710.1 Thale cress mitochondrion 28.28 27.61
AT1G62914.1 Thale cress mitochondrion 29.29 27.46
AT1G64583.1 Thale cress mitochondrion 28.28 27.34
CDY46912 Canola mitochondrion 27.27 27.33
AT1G63400.1 Thale cress cytosol, plastid 31.72 27.21
CDY34870 Canola mitochondrion 15.76 27.18
AT5G41170.1 Thale cress mitochondrion 28.89 27.13
CDY65983 Canola mitochondrion 22.83 26.78
TraesCS6B01G127200.1 Wheat cytosol 18.59 26.74
AT1G12775.1 Thale cress cytosol, mitochondrion 34.75 26.71
TraesCS1A01G067700.1 Wheat extracellular 17.98 26.41
CDY25522 Canola mitochondrion, plastid 23.84 26.4
AT1G64580.1 Thale cress mitochondrion 27.88 26.39
AT1G06580.1 Thale cress mitochondrion 26.46 26.2
CDY66358 Canola mitochondrion 20.4 25.9
TraesCS2B01G126900.1 Wheat cytosol 19.8 25.65
HORVU1Hr1G018190.2 Barley cytosol 14.75 25.61
AT4G26800.2 Thale cress mitochondrion, plastid 26.46 25.49
Zm00001d018982_P001 Maize mitochondrion 17.98 25.43
CDY28348 Canola mitochondrion, plastid 30.51 25.25
CDY47835 Canola mitochondrion 22.22 25.17
HORVU1Hr1G011250.1 Barley cytosol 14.95 25.08
CDY31271 Canola mitochondrion 24.44 24.9
Bra027726.1-P Field mustard mitochondrion 23.64 24.84
CDY66357 Canola cytosol 18.99 24.8
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 18.79 24.6
TraesCS6D01G083300.1 Wheat mitochondrion 22.02 24.44
CDY29251 Canola mitochondrion 24.85 24.26
CDY25519 Canola mitochondrion, plastid 31.11 24.1
CDY16032 Canola mitochondrion 19.8 24.02
HORVU6Hr1G017870.2 Barley mitochondrion 14.55 24.0
Bra026401.1-P Field mustard plastid 25.45 23.55
CDX89301 Canola plastid 25.45 23.55
Os10t0501700-00 Rice cytosol 21.41 23.35
CDX68680 Canola mitochondrion 21.62 23.16
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 22.02 22.52
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 23.23 22.5
Os08t0248400-01 Rice mitochondrion 19.8 22.27
TraesCS1D01G058000.1 Wheat cytosol 18.18 22.17
CDY16003 Canola cytosol, plastid 17.17 21.74
TraesCS6B01G127500.1 Wheat cytosol 21.41 21.63
TraesCS6D01G017800.1 Wheat cytosol 23.43 21.6
TraesCS1D01G058400.1 Wheat cytosol 22.22 21.36
TraesCS7D01G231400.1 Wheat cytosol, plastid 17.37 21.34
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 21.62 21.27
TraesCSU01G090200.1 Wheat cytosol 18.99 21.27
Os10t0495100-01 Rice cytosol, mitochondrion 19.8 21.26
AT1G64100.2 Thale cress cytosol 34.34 21.09
TraesCS6A01G083000.1 Wheat cytosol 19.39 21.05
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 21.41 20.99
TraesCS6D01G083100.1 Wheat cytosol 20.61 20.82
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 20.2 20.79
TraesCS1B01G072700.1 Wheat cytosol 21.41 20.78
TraesCS6D01G083400.1 Wheat mitochondrion 20.61 20.69
TraesCS7B01G469500.1 Wheat cytosol 23.43 20.64
Os10t0497366-00 Rice mitochondrion 16.57 20.45
KXG35774 Sorghum cytosol, mitochondrion 19.39 20.3
TraesCS6A01G015000.1 Wheat mitochondrion 16.97 20.24
TraesCS1D01G055300.1 Wheat cytosol 25.25 20.23
TraesCSU01G089700.1 Wheat mitochondrion 19.6 20.12
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 13.13 20.0
TraesCSU01G089800.1 Wheat mitochondrion 14.14 19.94
TraesCS1D01G056700.1 Wheat cytosol 24.44 19.93
TraesCS1B01G073100.1 Wheat cytosol 24.24 19.8
HORVU0Hr1G035310.1 Barley cytosol 23.23 19.76
KXG34536 Sorghum mitochondrion 22.83 19.76
TraesCS2B01G560300.1 Wheat cytosol 22.63 19.68
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 17.17 19.63
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 17.37 19.59
Os10t0499500-01 Rice mitochondrion 20.0 19.57
TraesCS1B01G085400.1 Wheat cytosol 25.25 19.5
TraesCS1B01G073200.1 Wheat cytosol 11.92 19.47
TraesCS6D01G076500.1 Wheat plastid 17.78 19.43
TraesCS1B01G038400.1 Wheat cytosol 23.84 19.41
TraesCS6D01G017700.1 Wheat plastid 20.81 19.29
TraesCS6B01G021600.1 Wheat mitochondrion 27.88 19.27
TraesCS1B01G038200.1 Wheat mitochondrion 24.65 19.27
TraesCS2B01G559900.1 Wheat cytosol 21.01 19.19
OQU88594 Sorghum cytosol 20.2 19.16
CDY15970 Canola cytosol 3.64 19.15
TraesCS2D01G533000.1 Wheat cytosol, extracellular 25.45 19.12
TraesCS1A01G054800.1 Wheat cytosol 22.42 19.07
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 25.45 18.98
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 24.44 18.94
TraesCS1B01G039700.1 Wheat cytosol 23.23 18.91
Os08t0107800-01 Rice mitochondrion 23.84 18.91
HORVU6Hr1G014310.1 Barley mitochondrion 26.06 18.78
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 14.34 18.73
TraesCS1A01G031600.1 Wheat cytosol 25.05 18.73
Os08t0107700-01 Rice cytosol, mitochondrion 14.14 18.72
EER95949 Sorghum mitochondrion 25.05 18.7
CDX81633 Canola extracellular, golgi, plasma membrane 34.34 18.7
CDY34370 Canola cytosol 30.91 18.64
TraesCS1B01G075300.1 Wheat cytosol 22.42 18.59
TraesCS1D01G068600.1 Wheat plastid 12.73 18.53
TraesCS6D01G047700.1 Wheat mitochondrion 25.86 18.52
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 26.67 18.46
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 26.67 18.46
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 26.46 18.35
TraesCS1B01G072400.1 Wheat cytosol 25.66 18.27
TraesCS6B01G114300.1 Wheat cytosol 14.34 18.25
TraesCS2A01G526200.1 Wheat golgi 25.05 18.21
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 26.26 18.18
TraesCS2A01G531000.1 Wheat golgi 24.85 18.11
TraesCS2A01G531100.1 Wheat cytosol 20.81 18.1
TraesCS1A01G031700.1 Wheat plastid 26.87 17.95
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 25.25 17.93
TraesCS1B01G086000.1 Wheat plastid 24.85 17.93
Zm00001d007534_P001 Maize plastid 28.08 17.89
OQU82831 Sorghum cytosol 22.02 17.78
TraesCS1A01G067000.1 Wheat mitochondrion 25.66 17.74
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 24.04 17.68
Zm00001d007555_P001 Maize plastid 28.89 17.57
TraesCS1A01G054500.1 Wheat mitochondrion 27.68 17.56
KXG28799 Sorghum plastid 26.87 17.5
TraesCS2D01G532100.1 Wheat mitochondrion 24.44 17.49
TraesCS6A01G014600.1 Wheat cytosol 13.94 17.47
Zm00001d007531_P001 Maize plastid 28.69 17.44
TraesCS1A01G057300.1 Wheat cytosol 25.25 17.41
Os10t0495200-01 Rice mitochondrion 27.47 17.39
TraesCS1A01G073600.1 Wheat mitochondrion 13.74 17.35
TraesCS1D01G076500.1 Wheat mitochondrion 23.23 17.32
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 16.77 17.29
TraesCS2D01G532500.1 Wheat plastid 23.64 17.21
TraesCS6D01G290900.1 Wheat mitochondrion 25.45 17.19
TraesCS1B01G085300.1 Wheat mitochondrion 27.47 17.17
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 24.24 17.17
TraesCS1D01G068900.1 Wheat mitochondrion 28.08 17.1
TraesCS1B01G072300.1 Wheat plastid 19.6 17.08
TraesCS1B01G092600.1 Wheat plastid 17.78 17.02
HORVU6Hr1G002890.6 Barley cytosol, plastid 27.27 16.98
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 11.72 16.96
Zm00001d007548_P001 Maize plastid 27.88 16.95
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 27.07 16.92
Zm00001d007559_P001 Maize plastid 27.88 16.89
Os10t0497300-01 Rice mitochondrion 27.07 16.88
TraesCS2D01G532400.1 Wheat cytosol 20.81 16.86
TraesCS1A01G067600.1 Wheat mitochondrion 27.68 16.85
OQU82836 Sorghum cytosol 20.81 16.83
TraesCS1B01G038500.1 Wheat mitochondrion 26.67 16.71
TraesCS1B01G085900.1 Wheat mitochondrion 27.47 16.71
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 27.88 16.63
OQU82856 Sorghum cytosol 25.25 16.62
TraesCS1A01G067400.1 Wheat mitochondrion 27.68 16.61
Zm00001d009733_P001 Maize cytosol 26.67 16.6
TraesCS1D01G068400.1 Wheat mitochondrion 27.47 16.52
TraesCS1B01G315500.1 Wheat mitochondrion 10.71 16.51
TraesCS1A01G054700.2 Wheat mitochondrion 27.07 16.5
TraesCS1D01G069100.1 Wheat mitochondrion 21.41 16.49
TraesCS1D01G056200.1 Wheat mitochondrion 27.47 16.48
Bra016758.1-P Field mustard plastid 38.38 16.39
TraesCS1D01G068500.1 Wheat mitochondrion 26.87 16.38
Bra027656.1-P Field mustard cytosol 31.11 16.37
TraesCS2D01G532300.1 Wheat plastid 25.66 16.32
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 25.86 16.26
TraesCS1B01G039100.1 Wheat mitochondrion 25.66 16.22
EES07882 Sorghum cytosol 25.25 16.09
TraesCS2B01G560700.1 Wheat plastid 25.05 16.08
EES09203 Sorghum cytosol 25.86 16.04
Os04t0349600-01 Rice plastid 12.53 16.02
KXG27690 Sorghum cytosol, plastid 23.64 16.01
OQU80148 Sorghum mitochondrion 23.43 15.96
TraesCS6A01G311600.1 Wheat mitochondrion 26.87 15.91
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 25.05 15.9
TraesCS1D01G068800.1 Wheat plastid 26.06 15.81
TraesCS1B01G071600.1 Wheat mitochondrion 27.07 15.8
TraesCS1A01G073800.1 Wheat mitochondrion 10.51 15.62
HORVU0Hr1G031920.1 Barley plastid 27.07 15.58
OQU82823 Sorghum cytosol 25.05 15.56
OQU82827 Sorghum cytosol 25.05 15.56
TraesCS2A01G530600.1 Wheat cytosol 24.04 15.56
HORVU1Hr1G010970.1 Barley mitochondrion 25.86 15.5
TraesCS1B01G039200.1 Wheat mitochondrion 24.44 15.43
TraesCS1D01G057800.1 Wheat mitochondrion 11.31 15.43
HORVU6Hr1G076780.7 Barley mitochondrion 25.66 15.41
HORVU1Hr1G013810.1 Barley plastid 26.06 15.38
TraesCS1B01G092500.1 Wheat mitochondrion 24.24 15.33
HORVU1Hr1G010890.5 Barley cytosol 27.68 15.26
HORVU1Hr1G014040.1 Barley mitochondrion 25.66 15.25
TraesCS1B01G072900.2 Wheat mitochondrion 26.87 15.23
HORVU1Hr1G004750.6 Barley plastid 24.44 15.16
TraesCS2D01G532600.1 Wheat plastid 23.64 15.08
TraesCS1A01G073700.1 Wheat cytosol 11.72 15.06
OQU82832 Sorghum cytosol 8.69 15.04
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 23.23 15.01
HORVU1Hr1G011160.2 Barley cytosol, plastid 27.07 14.97
HORVU1Hr1G014060.1 Barley plastid 26.87 14.94
TraesCS1B01G084800.1 Wheat cytosol 13.94 14.87
Os08t0110200-01 Rice mitochondrion 23.84 14.79
CDY31277 Canola plastid 28.48 14.7
Os10t0497432-01 Rice mitochondrion 7.88 14.66
TraesCS1D01G068700.1 Wheat cytosol 12.93 14.58
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 21.01 14.5
HORVU1Hr1G011300.3 Barley plastid 26.87 14.46
HORVU1Hr1G011150.1 Barley cytosol, plastid 25.66 14.38
TraesCS1A01G055800.1 Wheat mitochondrion 22.22 14.27
TraesCS1D01G076900.1 Wheat plastid 18.79 14.16
TraesCS1D01G076400.1 Wheat cytosol 10.3 14.05
KXG19780 Sorghum cytosol 16.57 13.87
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 7.07 13.83
TraesCS1D01G076700.1 Wheat cytosol 9.29 13.77
Os04t0351333-00 Rice cytosol 24.44 13.77
Zm00001d009735_P001 Maize cytosol 26.46 13.46
TraesCS6B01G341800.2 Wheat cytosol 10.71 13.28
TraesCS1A01G056000.1 Wheat cytosol 10.71 13.18
CDY34680 Canola cytosol 23.84 12.94
OQU82833 Sorghum cytosol 11.52 12.72
TraesCS1A01G067800.1 Wheat cytosol 9.49 12.57
HORVU1Hr1G011400.44 Barley plastid 15.15 12.18
OQU82834 Sorghum cytosol 23.64 12.15
TraesCS1D01G033000.1 Wheat cytosol 9.7 11.88
TraesCS1D01G067600.1 Wheat cytosol 8.69 11.78
TraesCS1B01G038600.1 Wheat cytosol 8.48 11.57
TraesCS1D01G058500.1 Wheat plastid 12.93 11.23
TraesCS6B01G129100.1 Wheat cytosol, plastid 6.46 11.11
TraesCS1A01G055600.1 Wheat cytosol 7.27 11.08
TraesCS1D01G057700.1 Wheat cytosol 7.27 11.08
OQU88581 Sorghum cytosol 24.04 10.95
TraesCS2D01G532200.1 Wheat cytosol 5.66 9.56
TraesCS1A01G074000.1 Wheat mitochondrion 5.45 9.54
TraesCS1B01G038300.1 Wheat plastid 9.49 8.61
TraesCS1A01G066600.1 Wheat mitochondrion 4.04 7.6
TraesCS1A01G055500.1 Wheat mitochondrion 2.83 6.45
TraesCS1D01G056600.1 Wheat mitochondrion 2.42 5.94
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 2.63 5.7
CDY21063 Canola plastid 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400025087EnsemblPlantsGene:PGSC0003DMG400009687Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149PANTHER:PTHR44149:SF3
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PGSC:PGSC0003DMG400009687SUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI000296C643UniProt:M1AKZ3MapMan:35.1::
Description
PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009687]
Coordinates
chr6:+:6506389..6508888
Molecular Weight (calculated)
56436.5 Da
IEP (calculated)
6.335
GRAVY (calculated)
-0.000
Length
495 amino acids
Sequence
(BLAST)
001: MQKLGIPING VILNSVINSY SLMHRADCGF SVLPIYLKNG ISFDVVTFTA LIRGFFAENK VKDAVELFKK LVREKICEPD EVMYATIMNG LSKRGHTEKT
101: LSLLRLMEQG NTKPDIFIYA IVVDALCKDR NLDGAISLLN EMKQKGIPPD IVTYSSLIDG LCKLGQWEKV RILFSEMVNL NIYPNVRTFT ILTDGLCKEG
201: KVEDAEEVMR QMVRKGVEPN IIIYTAIMDG YCLRGELDRA RRVFDFMIDK KIEPDIICYS VLINGYCKVK QLAKAMQLFH EISQKGSKPD IFTYNILLQG
301: LFEAGKIGSA KEFFAEMLTT GLVPDLYTLC TLLNGYFKYG LVEEAMSFFN KLEREIEYNS IEFYNVVING LCKNGELDKA RVIFEKLSLI GMLPNVRTYT
401: IMINGFSLEG FLDEAKDMLR KMEDNGCMPN NVTYNVFVRG NLRCNKINEM AIFMKEMVRK GFSCDADTTE LLVNVIRENP SVLDMIPEFR SEYKK
Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)
001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.