CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46909	Canola	mitochondrion	21.05	65.75
CDY66357	Canola	cytosol	24.34	58.58
CDY09968	Canola	cytosol	16.45	51.02
CDY06217	Canola	cytosol	16.34	50.85
CDY66358	Canola	mitochondrion	21.27	49.74
AT1G62680.2	Thale cress	plastid	29.5	49.09
CDY46912	Canola	mitochondrion	26.54	48.99
CDY03257	Canola	cytosol	19.19	44.76
CDY39810	Canola	cytosol	18.97	44.25
CDX67634	Canola	cytosol	19.74	42.55
CDY08386	Canola	cytosol	19.85	40.67
CDY16033	Canola	cytosol	6.47	39.33
CDY51169	Canola	cytosol	17.32	37.35
CDY34688	Canola	cytosol	14.8	37.29
CDY48949	Canola	mitochondrion	19.63	37.21
CDY46394	Canola	mitochondrion	19.63	37.21
CDY16031	Canola	cytosol	12.06	35.37
CDY16002	Canola	cytosol	11.95	35.05
CDY47835	Canola	mitochondrion	16.78	35.01
CDY34969	Canola	mitochondrion	19.08	34.39
CDY25492	Canola	mitochondrion	18.42	34.22
CDY16110	Canola	extracellular	15.35	34.15
CDY49646	Canola	mitochondrion	18.64	33.93
CDX68679	Canola	cytosol	4.28	33.91
CDX69436	Canola	plastid	18.42	33.73
CDY26607	Canola	cytosol	16.89	33.7
CDY34375	Canola	mitochondrion	18.97	33.46
CDY26588	Canola	extracellular	11.73	33.02
CDX71969	Canola	cytosol	14.25	32.83
CDY65983	Canola	mitochondrion	15.02	32.46
CDY28348	Canola	mitochondrion, plastid	20.5	31.27
PGSC0003DMT400008759	Potato	cytosol	10.64	30.41
CDY33753	Canola	mitochondrion	14.69	30.18
Solyc06g007810.1.1	Tomato	cytosol	8.77	29.85
CDY31271	Canola	mitochondrion	15.68	29.42
VIT_14s0030g02260.t01	Wine grape	cytosol	14.25	29.35
CDY26593	Canola	cytosol	19.52	29.23
CDY31272	Canola	mitochondrion	18.09	29.05
CDY68929	Canola	mitochondrion	19.3	29.0
CDY35831	Canola	mitochondrion	16.23	28.74
CDY29251	Canola	mitochondrion	15.9	28.6
CDY33797	Canola	mitochondrion	16.01	28.52
CDY16026	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	16.67	27.69
CDY26589	Canola	cytosol	2.08	27.54
PGSC0003DMT400052977	Potato	cytosol	11.73	27.51
CDX89301	Canola	plastid	16.12	27.48
Solyc06g005220.2.1	Tomato	cytosol	12.06	27.09
CDY00489	Canola	mitochondrion	17.0	26.45
VIT_12s0028g02320.t01	Wine grape	mitochondrion	13.71	26.21
CDY26565	Canola	mitochondrion	16.23	26.01
VIT_14s0081g00110.t01	Wine grape	cytosol	13.93	25.87
Solyc06g007280.2.1	Tomato	cytosol	6.91	24.71
CDY25522	Canola	mitochondrion, plastid	11.84	24.16
PGSC0003DMT400025087	Potato	endoplasmic reticulum	12.94	23.84
KRH70370	Soybean	cytosol	13.82	23.16
VIT_14s0081g00270.t01	Wine grape	plastid	14.69	23.1
KRH09256	Soybean	mitochondrion	14.14	23.08
VIT_14s0081g00120.t01	Wine grape	plastid	14.69	22.98
PGSC0003DMT400025067	Potato	cytosol	11.84	22.69
KRH38755	Soybean	mitochondrion	14.69	22.56
CDY25519	Canola	mitochondrion, plastid	15.68	22.38
KRH49698	Soybean	cytosol	13.93	22.28
KRH75045	Soybean	mitochondrion	14.47	22.11
PGSC0003DMT400025074	Potato	cytosol	13.38	22.1
VIT_14s0081g00280.t01	Wine grape	mitochondrion	15.35	21.91
KRH42744	Soybean	mitochondrion	14.47	21.6
PGSC0003DMT400008757	Potato	cytosol	11.73	21.49
VIT_14s0030g02280.t01	Wine grape	plastid	13.16	21.39
KRH58843	Soybean	nucleus	14.25	21.28
KRH75048	Soybean	mitochondrion	14.14	21.22
KRH75063	Soybean	mitochondrion, plastid	14.04	21.19
PGSC0003DMT400053556	Potato	mitochondrion	10.31	20.48
PGSC0003DMT400008760	Potato	mitochondrion	13.16	20.48
Solyc06g007300.1.1	Tomato	extracellular	13.27	20.44
CDY15970	Canola	cytosol	2.08	20.21
Solyc06g007740.1.1	Tomato	cytosol	13.05	20.17
PGSC0003DMT400056665	Potato	mitochondrion	12.94	20.03
PGSC0003DMT400052971	Potato	mitochondrion	12.94	19.9
PGSC0003DMT400015298	Potato	mitochondrion	13.27	19.84
PGSC0003DMT400015293	Potato	mitochondrion	13.27	19.84
CDY16032	Canola	mitochondrion	8.77	19.61
PGSC0003DMT400056663	Potato	plastid	12.61	19.56
CDY34370	Canola	cytosol	17.43	19.37
Solyc04g080120.1.1	Tomato	extracellular	12.94	19.28
PGSC0003DMT400053185	Potato	mitochondrion	12.39	19.15
PGSC0003DMT400053182	Potato	cytosol	11.73	17.86
CDX81633	Canola	extracellular, golgi, plasma membrane	16.89	16.94
CDY34870	Canola	mitochondrion	5.15	16.38
CDX68680	Canola	mitochondrion	7.13	14.07
CDY31277	Canola	plastid	14.47	13.76
CDY16003	Canola	cytosol, plastid	4.93	11.51
CDY21063	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.8.430	Gene3D:1.25.40.10	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:A0A078H833
UniProt:A0A078H833	EnsemblPlants:CDY34680	ProteinID:CDY34680	ProteinID:CDY34680.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0043531	EnsemblPlantsGene:GSBRNA2T00057147001	InterPro:IPR001611	InterPro:IPR002885	InterPro:IPR011990	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01535
PFAM:PF12854	PFAM:PF13041	PFAM:PF13855	PRINTS:PR00364	PFscan:PS51375	PANTHER:PTHR43909
PANTHER:PTHR43909:SF7	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
UniParc:UPI0004EC44FE	SEG:seg	:	:	:	:

Description

BnaC04g20030DBnaC04g20030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H833]

Coordinates

chrLK032339:-:60648..64704

Molecular Weight (calculated)

102414.0 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.004

Length

912 amino acids

Sequence
(BLAST)

001: MLKLGFEPDS VTLGSLVKGF CRKNMANEAV YFVEKMGLCN SGRWSDAVRL LSEIIKKNIS PNVITYSALV DAFVKNGKVL EAKEMIRMCI DPDVVTYSSL
101: INGLCMQGRI DEASEMFDLM VSKGCFPDVV SYNTLINGFC KSKRAEDGMR LFREMSQRGL VSNTITYNTL IQGFFQAGDV DMAHEFFGQI DSFGVSPDIW
201: TYNILLVGLC DNGELEKALV IFEDMQKREM DLDIVTYTII IRGMCETGKV EDAWGLFCSL SVKGVKPDVV AYITIMSCLC RKGLHREIDE LYTKIKGDGL
301: MLNDGTLCLR DGDITVSAEL IKEMLSHGYA PSGGGKKAVS LLRVCALLSS SEPALSLALV SFLHKFEMQN LPMQTTVEEL KAKRDDLSRR VESEENKGLQ
401: MLAEVQSLKL SYSYGKRVFK MLKEVENIKA NGVFQLIADK VQASAVVERP IQQVIVGRET LLETAWNRLM EDGVSSMGLY GMGGVGKTTL LTQINNKLFK
501: KKNTFDIVVW IVVSKDFQIQ KIQEDIAKKL SLTGQDWNQK DEDQKSCDIH NVLKRKTFVM LLDDIWAKVD LMKIGVPYPS RENGCKVVFT TRSLEVCGCM
601: GADVEMVVQC LPPHDALELF KKNVGEITLG SHPKIPELAS IVAKKCQGLP LALDVIGETM ACKRTIQEWQ HAIDVLTSYA AEFSGMEDEI LPILKFSYDN
701: LKGEHVKLCF LYWALFPEDH RIWKRVLIDY WICDGFIDES KGMERAENKG YEIIGSLVRS SLLMENGAND VYMHDVVREM ALWIASDFGL NEIPKIQNSN
801: IVNRISLMSN KIESISGGLD CLELTALFLQ ENEKLGSISG PFFLNMPRLV VLDLSGNTNF YELPDEVSQL VSLKYLNISR LGIQCLPVGF RELKNLIHLS
901: PTLYQFVKPQ RI

Best Arabidopsis Sequence Match ( AT1G63350.1 )
(BLAST)

001: MGISFSIPFD PCVNKVSQWL DMKVSYTHNL EKNLVALETT MEELKAKRDD LLRKLKREED RGLQTLGEIK VWLNRVETIE SRVNDLLNAR NAELQRLCLC
101: GFCSKSLTTS YRYGKSVFLK LREVEKLERR VFEVISDQAS TSEVEEQQLQ PTIVGQETML DNAWNHLMED GVGIMGLYGM GGVGKTTLLT QINNKFSKYM
201: CGFDSVIWVV VSKEVNVENI LDEIAQKVHI SGEKWDTKYK YQKGVYLYNF LRKMRFVLFL DDIWEKVNLV EIGVPFPTIK NKCKVVFTTR SLDVCTSMGV
301: EKPMEVQCLA DNDAYDLFQK KVGQITLGSD PEIRELSRVV AKKCCGLPLA LNVVSETMSC KRTVQEWRHA IYVLNSYAAK FSGMDDKILP LLKYSYDSLK
401: GEDVKMCLLY CALFPEDAKI RKENLIEYWI CEEIIDGSEG IDKAENQGYE IIGSLVRASL LMEEVELDGA NIVCLHDVVR EMALWIASDL GKQNEAFIVR
501: ASVGLREILK VENWNVVRRM SLMKNNIAHL DGRLDCMELT TLLLQSTHLE KISSEFFNSM PKLAVLDLSG NYYLSELPNG ISELVSLQYL NLSSTGIRHL
601: PKGLQELKKL IHLYLERTSQ LGSMVGISCL HNLKVLKLSG SSYAWDLDTV KELEALEHLE VLTTTIDDCT LGTDQFLSSH RLMSCIRFLK ISNNSNRNRN
701: SSRISLPVTM DRLQEFTIEH CHTSEIKMGR ICSFSSLIEV NLSNCRRLRE LTFLMFAPNL KRLHVVSSNQ LEDIINKEKA HDGEKSGIVP FPKLNELHLY
801: NLRELKNIYW SPLPFPCLEK INVMGCPNLK KLPLDSKSGK HGGNGLIITH REMEWITRVE WEDEATKTRF LANRSSFSSS LICFSNDLVS RDMNCFHL

Arabidopsis Description

Disease resistance protein (CC-NBS-LRR class) family [Source:TAIR;Acc:AT1G63350]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.