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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028267.1-P Field mustard mitochondrion 98.98 92.65
CDY51169 Canola cytosol 60.41 83.69
CDY16110 Canola extracellular 54.1 77.32
CDY33797 Canola mitochondrion 64.85 74.22
CDY26565 Canola mitochondrion 71.5 73.64
CDY26589 Canola cytosol 8.53 72.46
CDY33753 Canola mitochondrion 54.78 72.3
CDY26588 Canola extracellular 38.74 70.06
CDY35831 Canola mitochondrion 61.43 69.9
CDY16032 Canola mitochondrion 48.46 69.61
CDY68929 Canola mitochondrion 69.97 67.55
CDY31271 Canola mitochondrion 55.8 67.28
CDY34870 Canola mitochondrion 32.76 66.9
CDX71969 Canola cytosol 45.05 66.67
CDY31272 Canola mitochondrion 64.33 66.37
AT3G22470.1 Thale cress cytosol, mitochondrion 69.97 66.24
CDY16003 Canola cytosol, plastid 44.03 65.98
CDY26607 Canola cytosol 51.37 65.86
CDY16031 Canola cytosol 34.81 65.59
AT1G12300.1 Thale cress mitochondrion 70.82 65.15
CDY26593 Canola cytosol 67.06 64.53
CDY16002 Canola cytosol 33.79 63.67
AT1G12620.1 Thale cress cytosol, mitochondrion 66.89 63.12
AT1G12775.1 Thale cress cytosol, mitochondrion 67.24 61.18
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 57.0 60.84
CDY16033 Canola cytosol 15.02 58.67
CDY34375 Canola mitochondrion 45.39 51.45
CDY15970 Canola cytosol 8.02 50.0
CDY34688 Canola cytosol 30.38 49.17
CDY09968 Canola cytosol 24.57 48.98
CDY03257 Canola cytosol 32.25 48.34
CDY06217 Canola cytosol 24.06 48.12
CDY39810 Canola cytosol 32.08 48.08
CDX81633 Canola extracellular, golgi, plasma membrane 73.21 47.19
CDX67634 Canola cytosol 32.76 45.39
CDY25522 Canola mitochondrion, plastid 34.3 44.97
CDY46912 Canola mitochondrion 37.71 44.74
CDY47835 Canola mitochondrion 32.94 44.16
CDX69436 Canola plastid 37.37 43.98
CDY08386 Canola cytosol 33.28 43.82
CDY25492 Canola mitochondrion 36.52 43.58
CDY66358 Canola mitochondrion 28.84 43.33
CDY46909 Canola mitochondrion 21.5 43.15
CDY46394 Canola mitochondrion 35.32 43.04
CDY48949 Canola mitochondrion 35.32 43.04
VIT_12s0028g02320.t01 Wine grape mitochondrion 34.98 42.98
CDY34969 Canola mitochondrion 37.03 42.89
CDY49646 Canola mitochondrion 36.52 42.71
CDY65983 Canola mitochondrion 30.72 42.65
CDX68679 Canola cytosol 8.19 41.74
Solyc06g007280.2.1 Tomato cytosol 18.09 41.57
CDY25519 Canola mitochondrion, plastid 44.03 40.38
VIT_14s0081g00270.t01 Wine grape plastid 39.93 40.34
VIT_14s0081g00120.t01 Wine grape plastid 38.57 38.77
KRH70370 Soybean cytosol 35.67 38.42
VIT_14s0081g00110.t01 Wine grape cytosol 31.91 38.09
CDY28348 Canola mitochondrion, plastid 38.74 37.96
PGSC0003DMT400008757 Potato cytosol 32.08 37.75
Solyc06g005220.2.1 Tomato cytosol 26.11 37.68
KRH49698 Soybean cytosol 36.35 37.37
CDY29251 Canola mitochondrion 32.08 37.08
PGSC0003DMT400025074 Potato cytosol 34.47 36.59
PGSC0003DMT400052977 Potato cytosol 24.23 36.5
PGSC0003DMT400025087 Potato endoplasmic reticulum 30.72 36.36
KRH42744 Soybean mitochondrion 37.71 36.17
KRH58843 Soybean nucleus 37.54 36.01
CDX68680 Canola mitochondrion 28.33 35.93
PGSC0003DMT400008760 Potato mitochondrion 35.84 35.84
Solyc06g007300.1.1 Tomato extracellular 36.01 35.64
CDX89301 Canola plastid 32.42 35.51
KRH75045 Soybean mitochondrion 36.18 35.51
KRH75063 Soybean mitochondrion, plastid 36.52 35.43
PGSC0003DMT400052971 Potato mitochondrion 35.67 35.24
PGSC0003DMT400056665 Potato mitochondrion 35.15 34.97
PGSC0003DMT400025067 Potato cytosol 28.33 34.87
VIT_14s0081g00280.t01 Wine grape mitochondrion 37.88 34.74
Solyc06g007810.1.1 Tomato cytosol 15.87 34.7
PGSC0003DMT400056663 Potato plastid 34.81 34.69
VIT_14s0030g02280.t01 Wine grape plastid 33.11 34.58
PGSC0003DMT400053185 Potato mitochondrion 34.81 34.58
Solyc06g007740.1.1 Tomato cytosol 34.81 34.58
KRH75048 Soybean mitochondrion 35.84 34.54
PGSC0003DMT400008759 Potato cytosol 18.77 34.48
KRH38755 Soybean mitochondrion 34.47 34.01
KRH09256 Soybean mitochondrion 32.08 33.63
PGSC0003DMT400053556 Potato mitochondrion 26.28 33.55
PGSC0003DMT400053182 Potato cytosol 33.28 32.55
CDY66357 Canola cytosol 20.48 31.66
CDY34370 Canola cytosol 43.69 31.18
CDY31277 Canola plastid 50.34 30.76
PGSC0003DMT400015293 Potato mitochondrion 30.72 29.51
PGSC0003DMT400015298 Potato mitochondrion 30.72 29.51
Solyc04g080120.1.1 Tomato extracellular 30.55 29.25
VIT_14s0030g02260.t01 Wine grape cytosol 22.01 29.12
CDY34680 Canola cytosol 26.45 17.0
CDY21063 Canola plastid 4.27 4.55
Protein Annotations
EnsemblPlants:CDY00489EnsemblPlantsGene:GSBRNA2T00110203001Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPFAM:PF12854PFAM:PF13041
PFscan:PS51375ProteinID:CDY00489ProteinID:CDY00489.1SUPFAM:SSF81901TIGRFAMs:TIGR00756UniParc:UPI0004EEE58C
MapMan:35.1:::::
Description
BnaA10g07840D
Coordinates
chrLK031919:+:667297..669177
Molecular Weight (calculated)
65700.5 Da
IEP (calculated)
6.840
GRAVY (calculated)
0.010
Length
586 amino acids
Sequence
(BLAST)
001: MIRSAKAMRF APPLILRTSL FQSPYEFVLY FCERDFSGLS RDRNGSYREM LRSGLVDIKK DDAISLFQSM IRSRPLPTVI DFTRLFSAVA KTKRYDLVLG
101: LVKQMELNGI SCDLYTLSIV INCFCRCREL GFAFSVFGKM LKLGYEPDTI TFSTLINGLC LEGRVSQAVE LVDRMVETKV TPDLIILNTL INGLCLQGKL
201: SEAMALIDRM MDNGCRPNEV SYGPILNRIC KSGNTALALD LFRKMEDRKI KPQLVQYSII IDSLCKDGSL EEALSLFNEM ETKDIKADVT TYNSLIGGFC
301: NARRWDDGAQ LLSDMITRGI TPNVITFSAL IDSFVKEGKL KEAKELYNEM IARGIDPDTI TYNSLIYGLC NEKRLDEANQ MIELMVRKGC DPSIVTYSIL
401: INGYCKAKRV DDGMRLFRKM PLRADTVTYN TLVQGFCQSG KLNVAKELFQ EMVSIGVPPS VMTYGILLDG MVDDAWDLFC SLSLNKGVKP DVKTYTIMIG
501: GLCKKGSLSE AGMLFRKMGE DGIAPNDCTY NTLIRAHLRG SDISTSVELI EEMKRWGFSA DASTINIVMD MLSSGRLDRS FLDMLS
Best Arabidopsis Sequence Match ( AT3G22470.1 )
(BLAST)
001: MIQRLIPLNR KASNFTQILE KGTSLLHYSS ITEAKLSYKE RLRNGIVDIK VNDAIDLFES MIQSRPLPTP IDFNRLCSAV ARTKQYDLVL GFCKGMELNG
101: IEHDMYTMTI MINCYCRKKK LLFAFSVLGR AWKLGYEPDT ITFSTLVNGF CLEGRVSEAV ALVDRMVEMK QRPDLVTVST LINGLCLKGR VSEALVLIDR
201: MVEYGFQPDE VTYGPVLNRL CKSGNSALAL DLFRKMEERN IKASVVQYSI VIDSLCKDGS FDDALSLFNE MEMKGIKADV VTYSSLIGGL CNDGKWDDGA
301: KMLREMIGRN IIPDVVTFSA LIDVFVKEGK LLEAKELYNE MITRGIAPDT ITYNSLIDGF CKENCLHEAN QMFDLMVSKG CEPDIVTYSI LINSYCKAKR
401: VDDGMRLFRE ISSKGLIPNT ITYNTLVLGF CQSGKLNAAK ELFQEMVSRG VPPSVVTYGI LLDGLCDNGE LNKALEIFEK MQKSRMTLGI GIYNIIIHGM
501: CNASKVDDAW SLFCSLSDKG VKPDVVTYNV MIGGLCKKGS LSEADMLFRK MKEDGCTPDD FTYNILIRAH LGGSGLISSV ELIEEMKVCG FSADSSTIKM
601: VIDMLSDRRL DKSFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ83]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.