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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025516.1-P Field mustard cytosol, mitochondrion 98.58 87.42
CDY48949 Canola mitochondrion 99.05 87.11
CDY46394 Canola mitochondrion 99.05 87.11
AT5G41170.1 Thale cress mitochondrion 74.47 59.77
CDY46909 Canola mitochondrion 38.06 55.14
CDY39810 Canola cytosol 49.65 53.71
CDY03257 Canola cytosol 49.65 53.71
CDY09968 Canola cytosol 36.17 52.04
CDY06217 Canola cytosol 35.93 51.88
CDY34969 Canola mitochondrion 58.39 48.81
CDY66358 Canola mitochondrion 43.5 47.18
CDY08386 Canola cytosol 49.41 46.97
CDY46912 Canola mitochondrion 54.14 46.36
CDY65983 Canola mitochondrion 46.1 46.21
CDX69436 Canola plastid 54.37 46.18
CDY25492 Canola mitochondrion 53.43 46.03
CDY49646 Canola mitochondrion 53.43 45.11
CDY16031 Canola cytosol 30.73 41.8
CDY28348 Canola mitochondrion, plastid 57.92 40.97
CDY26588 Canola extracellular 30.26 39.51
CDY51169 Canola cytosol 39.01 39.01
CDY47835 Canola mitochondrion 40.19 38.9
CDY29251 Canola mitochondrion 46.57 38.86
CDY16002 Canola cytosol 27.9 37.94
CDX89301 Canola plastid 46.81 37.01
CDY33797 Canola mitochondrion 44.68 36.91
CDY34688 Canola cytosol 31.44 36.74
CDY16110 Canola extracellular 34.99 36.1
CDY34375 Canola mitochondrion 43.74 35.78
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 46.34 35.7
VIT_12s0028g02320.t01 Wine grape mitochondrion 40.19 35.64
CDY26593 Canola cytosol 51.3 35.63
CDY66357 Canola cytosol 31.91 35.62
CDY31272 Canola mitochondrion 46.57 34.68
CDY31271 Canola mitochondrion 39.01 33.95
CDY26565 Canola mitochondrion 44.21 32.86
CDY68929 Canola mitochondrion 47.04 32.78
CDY00489 Canola mitochondrion 45.39 32.76
CDY26607 Canola cytosol 35.22 32.6
CDX71969 Canola cytosol 30.02 32.07
CDY16032 Canola mitochondrion 30.5 31.62
CDY33753 Canola mitochondrion 32.62 31.08
PGSC0003DMT400008759 Potato cytosol 23.17 30.72
CDY35831 Canola mitochondrion 37.12 30.49
KRH70370 Soybean cytosol 39.01 30.33
PGSC0003DMT400052977 Potato cytosol 27.66 30.08
VIT_14s0081g00270.t01 Wine grape plastid 40.9 29.83
KRH49698 Soybean cytosol 40.19 29.82
VIT_14s0081g00110.t01 Wine grape cytosol 34.52 29.74
CDY25522 Canola mitochondrion, plastid 31.21 29.53
VIT_14s0030g02280.t01 Wine grape plastid 39.01 29.41
Solyc06g005220.2.1 Tomato cytosol 27.9 29.06
KRH09256 Soybean mitochondrion 38.3 28.98
VIT_14s0081g00120.t01 Wine grape plastid 39.72 28.82
PGSC0003DMT400008757 Potato cytosol 33.81 28.71
KRH42744 Soybean mitochondrion 41.13 28.48
Solyc06g007810.1.1 Tomato cytosol 17.97 28.36
KRH58843 Soybean nucleus 40.9 28.31
Solyc06g007280.2.1 Tomato cytosol 17.02 28.24
PGSC0003DMT400025087 Potato endoplasmic reticulum 32.86 28.08
CDY25519 Canola mitochondrion, plastid 42.32 28.01
CDY16033 Canola cytosol 9.93 28.0
KRH75063 Soybean mitochondrion, plastid 39.95 27.98
KRH75045 Soybean mitochondrion 39.24 27.81
KRH38755 Soybean mitochondrion 38.77 27.61
CDY34870 Canola mitochondrion 18.68 27.53
PGSC0003DMT400008760 Potato mitochondrion 37.83 27.3
VIT_14s0081g00280.t01 Wine grape mitochondrion 40.66 26.92
PGSC0003DMT400025067 Potato cytosol 30.26 26.89
KRH75048 Soybean mitochondrion 38.3 26.64
PGSC0003DMT400025074 Potato cytosol 34.52 26.45
VIT_14s0030g02260.t01 Wine grape cytosol 27.42 26.19
Solyc06g007300.1.1 Tomato extracellular 36.41 26.01
PGSC0003DMT400052971 Potato mitochondrion 36.17 25.8
PGSC0003DMT400056665 Potato mitochondrion 35.7 25.64
PGSC0003DMT400053556 Potato mitochondrion 27.66 25.49
CDX68679 Canola cytosol 6.86 25.22
Solyc06g007740.1.1 Tomato cytosol 34.99 25.08
CDY16003 Canola cytosol, plastid 23.17 25.06
PGSC0003DMT400015298 Potato mitochondrion 35.7 24.75
PGSC0003DMT400015293 Potato mitochondrion 35.7 24.75
PGSC0003DMT400056663 Potato plastid 34.04 24.49
PGSC0003DMT400053185 Potato mitochondrion 33.81 24.24
Solyc04g080120.1.1 Tomato extracellular 34.99 24.18
PGSC0003DMT400053182 Potato cytosol 32.86 23.21
CDX68680 Canola mitochondrion 25.3 23.16
CDY34370 Canola cytosol 42.32 21.8
CDX81633 Canola extracellular, golgi, plasma membrane 45.86 21.34
CDY34680 Canola cytosol 42.55 19.74
CDY31277 Canola plastid 38.53 17.0
CDY26589 Canola cytosol 1.18 7.25
CDY15970 Canola cytosol 0.95 4.26
CDY21063 Canola plastid 1.18 0.91
Protein Annotations
EnsemblPlants:CDX67634EnsemblPlantsGene:GSBRNA2T00098792001Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPFAM:PF12854PFAM:PF13041
PFscan:PS51375ProteinID:CDX67634ProteinID:CDX67634.1SEG:segTIGRFAMs:TIGR00756UniParc:UPI0004EF40F7
MapMan:35.1:::::
Description
BnaA07g16740D
Coordinates
chrLK031787:-:1428839..1430154
Molecular Weight (calculated)
47207.9 Da
IEP (calculated)
8.148
GRAVY (calculated)
0.067
Length
423 amino acids
Sequence
(BLAST)
001: MVESRPLPST VDFTKLLTAI SKSKRFDVVI ALCNHLETLG IPHDLYTCNL VMNCFSRSSQ PHLASSFLGK MMKLGFSPDI VTFTSLVNGN RPEDAMYIVN
101: QMGIEPDVVM YTTLIESLCR NGLVDNAMSL FNQMESNGVK ADAVTYTSLV NGLCNSGRLS DAVSLLNDMM RRRINPDVVT FNALIDGFVK KGKLLEAREV
201: YSEMIRVSVA PDVFTHTSLI NGLCMEGRVD EAKEMFYSME DKGCFPDVVA YTSLINGFCK SRKVEYGMKL FYEMTQRGLL GNTVTYTALI QGFCQVGRHK
301: AAQEFFSQMV SRGVSPNIRT YNVLLHGLCL NGKLGKALLI FEDIQKREID VNIITYTIII QGMCKAGKLR DAVDLFCSLP SKGMKPNVVT YSTMISGLFR
401: EGFKLEAHVL FRKMKEDGVV LQN
Best Arabidopsis Sequence Match ( AT5G41170.1 )
(BLAST)
001: MAMRFFQLHR NRLVKGNSGK ALSFSRLLDL SFWVRAFCNY REILRNGLHS LQFNEALDLF THMVESRPLP SIIDFTKLLN VIAKMKKFDV VINLCDHLQI
101: MGVSHDLYTC NLLMNCFCQS SQPYLASSFL GKMMKLGFEP DIVTFTSLIN GFCLGNRMEE AMSMVNQMVE MGIKPDVVMY TTIIDSLCKN GHVNYALSLF
201: DQMENYGIRP DVVMYTSLVN GLCNSGRWRD ADSLLRGMTK RKIKPDVITF NALIDAFVKE GKFLDAEELY NEMIRMSIAP NIFTYTSLIN GFCMEGCVDE
301: ARQMFYLMET KGCFPDVVAY TSLINGFCKC KKVDDAMKIF YEMSQKGLTG NTITYTTLIQ GFGQVGKPNV AQEVFSHMVS RGVPPNIRTY NVLLHCLCYN
401: GKVKKALMIF EDMQKREMDG VAPNIWTYNV LLHGLCYNGK LEKALMVFED MRKREMDIGI ITYTIIIQGM CKAGKVKNAV NLFCSLPSKG VKPNVVTYTT
501: MISGLFREGL KHEAHVLFRK MKEDGVS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g41170, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLL3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.