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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 3
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 PGSC0003DMT400037344 AT4G26630.1 25387881
AT1G62670.1 PGSC0003DMT400057390 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400053185 Potato mitochondrion 84.31 85.59
Solyc06g007740.1.1 Tomato cytosol 78.46 79.66
PGSC0003DMT400008757 Potato cytosol 63.27 76.1
PGSC0003DMT400052971 Potato mitochondrion 74.12 74.87
PGSC0003DMT400056665 Potato mitochondrion 71.45 72.67
PGSC0003DMT400025074 Potato cytosol 65.44 71.01
PGSC0003DMT400056663 Potato plastid 69.45 70.75
PGSC0003DMT400052977 Potato cytosol 45.74 70.44
PGSC0003DMT400025087 Potato endoplasmic reticulum 57.76 69.9
PGSC0003DMT400008760 Potato mitochondrion 67.28 68.77
PGSC0003DMT400008759 Potato cytosol 35.56 66.77
PGSC0003DMT400025067 Potato cytosol 52.59 66.18
PGSC0003DMT400053556 Potato mitochondrion 50.58 66.01
PGSC0003DMT400015293 Potato mitochondrion 48.91 48.03
PGSC0003DMT400015298 Potato mitochondrion 48.91 48.03
VIT_12s0028g02320.t01 Wine grape mitochondrion 31.89 40.04
VIT_14s0081g00120.t01 Wine grape plastid 36.56 37.56
VIT_14s0081g00270.t01 Wine grape plastid 36.23 37.41
VIT_14s0081g00110.t01 Wine grape cytosol 29.55 36.05
VIT_14s0081g00280.t01 Wine grape mitochondrion 37.23 34.9
CDY26589 Canola cytosol 4.01 34.78
CDY16110 Canola extracellular 23.54 34.39
CDY34688 Canola cytosol 20.53 33.98
Bra026958.1-P Field mustard mitochondrion 35.89 33.75
Bra027636.1-P Field mustard cytosol 18.2 33.64
KRH70370 Soybean cytosol 30.55 33.64
Bra006187.1-P Field mustard plastid 16.19 33.33
Bra026882.1-P Field mustard cytosol 29.72 33.33
CDX71969 Canola cytosol 22.04 33.33
CDY09968 Canola cytosol 16.36 33.33
CDY00489 Canola mitochondrion 32.55 33.28
CDY31272 Canola mitochondrion 31.55 33.27
CDY33797 Canola mitochondrion 28.38 33.2
VIT_14s0030g02280.t01 Wine grape plastid 31.05 33.16
Bra026957.1-P Field mustard mitochondrion 33.22 33.0
Bra031731.1-P Field mustard mitochondrion 27.88 32.87
CDX67634 Canola cytosol 23.21 32.86
CDY06217 Canola cytosol 16.03 32.76
CDY51169 Canola cytosol 23.04 32.62
KRH58843 Soybean nucleus 33.22 32.57
Bra027029.1-P Field mustard mitochondrion 13.19 32.51
AT1G12700.2 Thale cress cytosol 33.39 32.36
CDY34969 Canola mitochondrion 27.21 32.21
AT1G12620.1 Thale cress cytosol, mitochondrion 33.39 32.21
Bra021192.1-P Field mustard plastid 27.05 32.14
AT3G22470.1 Thale cress cytosol, mitochondrion 33.06 31.99
CDY39810 Canola cytosol 20.87 31.97
Bra028267.1-P Field mustard mitochondrion 33.39 31.95
KRH75045 Soybean mitochondrion 31.72 31.83
KRH49698 Soybean cytosol 30.22 31.75
AT1G62720.1 Thale cress mitochondrion 25.71 31.75
KRH42744 Soybean mitochondrion 32.39 31.75
AT1G63130.1 Thale cress mitochondrion 33.39 31.75
AT5G16640.1 Thale cress mitochondrion 26.71 31.75
CDX69436 Canola plastid 26.38 31.73
CDY34870 Canola mitochondrion 15.19 31.71
CDY08386 Canola cytosol 23.54 31.69
KRH09256 Soybean mitochondrion 29.55 31.66
KRH38755 Soybean mitochondrion 31.39 31.65
Bra026971.1-P Field mustard mitochondrion 33.22 31.64
AT1G62670.1 Thale cress mitochondrion 33.22 31.59
KRH75048 Soybean mitochondrion 32.05 31.58
CDY26565 Canola mitochondrion 29.88 31.46
Bra036649.1-P Field mustard cytosol 20.53 31.46
CDY03257 Canola cytosol 20.53 31.46
Bra026836.1-P Field mustard cytosol, mitochondrion 25.71 31.36
CDY16033 Canola cytosol 7.85 31.33
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 28.71 31.33
AT1G62930.1 Thale cress plastid 32.89 31.32
CDY33753 Canola mitochondrion 23.21 31.31
AT1G12300.1 Thale cress mitochondrion 33.22 31.24
CDY46912 Canola mitochondrion 25.71 31.17
AT3G16710.1 Thale cress mitochondrion 26.38 31.16
KRH75063 Soybean mitochondrion, plastid 31.39 31.13
CDY65983 Canola mitochondrion 21.87 31.04
Bra027026.1-P Field mustard mitochondrion 27.05 30.98
Bra026884.1-P Field mustard cytosol 23.71 30.94
CDY26593 Canola cytosol 31.39 30.87
AT1G64583.1 Thale cress mitochondrion 26.38 30.86
AT1G63330.2 Thale cress cytosol 28.71 30.77
Bra026954.1-P Field mustard mitochondrion 33.39 30.77
CDY25492 Canola mitochondrion 25.21 30.75
Bra016762.1-P Field mustard mitochondrion 31.05 30.64
CDY68929 Canola mitochondrion 31.05 30.64
CDY26607 Canola cytosol 23.37 30.63
CDY46909 Canola mitochondrion 14.86 30.48
AT1G62680.2 Thale cress plastid 27.88 30.47
Bra025516.1-P Field mustard cytosol, mitochondrion 24.21 30.4
CDY34375 Canola mitochondrion 26.21 30.37
AT1G63150.1 Thale cress mitochondrion 31.89 30.37
CDY46394 Canola mitochondrion 24.37 30.35
AT1G62910.1 Thale cress mitochondrion 31.89 30.22
AT1G63400.1 Thale cress cytosol, plastid 29.05 30.16
CDY48949 Canola mitochondrion 24.21 30.15
CDY49646 Canola mitochondrion 25.21 30.14
AT1G63080.3 Thale cress mitochondrion 30.88 30.13
Bra036651.1-P Field mustard mitochondrion 26.88 30.09
CDY26588 Canola extracellular 16.19 29.94
CDY16002 Canola cytosol 15.53 29.9
CDY16031 Canola cytosol 15.53 29.9
AT1G12775.1 Thale cress cytosol, mitochondrion 32.05 29.81
AT1G06580.1 Thale cress mitochondrion 24.87 29.8
AT1G63070.1 Thale cress mitochondrion 29.22 29.66
CDY31271 Canola mitochondrion 23.87 29.42
AT1G62914.1 Thale cress mitochondrion 25.88 29.36
VIT_14s0030g02260.t01 Wine grape cytosol 21.7 29.35
Bra027658.1-P Field mustard cytosol, mitochondrion 26.38 29.1
AT1G62590.1 Thale cress mitochondrion 30.55 28.86
CDY35831 Canola mitochondrion 24.71 28.74
AT1G64580.1 Thale cress mitochondrion 25.04 28.68
CDY16032 Canola mitochondrion 19.53 28.68
AT5G41170.1 Thale cress mitochondrion 24.87 28.27
CDY66358 Canola mitochondrion 18.36 28.21
CDY28348 Canola mitochondrion, plastid 27.71 27.76
CDY16003 Canola cytosol, plastid 18.03 27.62
CDY25519 Canola mitochondrion, plastid 29.38 27.54
CDY47835 Canola mitochondrion 20.03 27.46
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 13.52 27.27
Bra027726.1-P Field mustard mitochondrion 21.37 27.18
CDY25522 Canola mitochondrion, plastid 20.03 26.85
AT4G26800.2 Thale cress mitochondrion, plastid 22.37 26.07
TraesCS1A01G067700.1 Wheat extracellular 14.52 25.82
CDX68680 Canola mitochondrion 19.87 25.76
TraesCS2B01G126900.1 Wheat cytosol 16.36 25.65
HORVU1Hr1G011250.1 Barley cytosol 12.52 25.42
CDY29251 Canola mitochondrion 21.37 25.25
Zm00001d018982_P001 Maize mitochondrion 14.69 25.14
CDX89301 Canola plastid 22.37 25.05
Os10t0501700-00 Rice cytosol 18.86 24.89
Bra026401.1-P Field mustard plastid 22.2 24.86
Os10t0495100-01 Rice cytosol, mitochondrion 18.86 24.51
TraesCS1D01G058000.1 Wheat cytosol 16.53 24.38
HORVU1Hr1G018190.2 Barley cytosol 11.52 24.21
TraesCS6B01G127200.1 Wheat cytosol 13.52 23.55
Os08t0248400-01 Rice mitochondrion 17.03 23.18
TraesCS6A01G015000.1 Wheat mitochondrion 16.03 23.13
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 14.52 23.02
HORVU6Hr1G017870.2 Barley mitochondrion 11.52 23.0
Os10t0497366-00 Rice mitochondrion 15.36 22.94
AT1G64100.2 Thale cress cytosol 30.72 22.83
TraesCSU01G089700.1 Wheat mitochondrion 18.36 22.82
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 18.36 22.73
TraesCS6B01G127500.1 Wheat cytosol 18.53 22.65
TraesCS6D01G083300.1 Wheat mitochondrion 16.86 22.65
TraesCSU01G090200.1 Wheat cytosol 16.69 22.62
TraesCS6D01G083100.1 Wheat cytosol 18.2 22.24
CDY66357 Canola cytosol 14.02 22.16
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 18.53 22.07
CDY34370 Canola cytosol 30.22 22.05
TraesCS6D01G076500.1 Wheat plastid 16.53 21.85
TraesCS1B01G073200.1 Wheat cytosol 11.02 21.78
TraesCS6D01G017800.1 Wheat cytosol 19.37 21.6
TraesCS7D01G231400.1 Wheat cytosol, plastid 14.52 21.59
TraesCS1D01G058400.1 Wheat cytosol 18.53 21.55
TraesCS6D01G083400.1 Wheat mitochondrion 17.7 21.5
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 18.03 21.39
Os10t0499500-01 Rice mitochondrion 18.03 21.34
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 15.36 21.25
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 11.52 21.23
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 18.03 21.14
TraesCS1B01G038200.1 Wheat mitochondrion 22.2 21.01
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 16.86 21.0
TraesCS1D01G068600.1 Wheat plastid 11.85 20.88
TraesCSU01G089800.1 Wheat mitochondrion 12.19 20.8
TraesCS6D01G017700.1 Wheat plastid 18.53 20.79
OQU88594 Sorghum cytosol 18.03 20.69
TraesCS6B01G021600.1 Wheat mitochondrion 24.71 20.67
KXG34536 Sorghum mitochondrion 19.7 20.63
TraesCS1B01G072700.1 Wheat cytosol 17.53 20.59
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 13.02 20.58
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 8.68 20.55
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 15.03 20.5
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 16.36 20.42
TraesCS6A01G083000.1 Wheat cytosol 15.53 20.39
TraesCS1B01G092600.1 Wheat plastid 17.53 20.31
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 24.21 20.31
TraesCS7B01G469500.1 Wheat cytosol 19.03 20.28
TraesCS1D01G056700.1 Wheat cytosol 20.53 20.26
CDX81633 Canola extracellular, golgi, plasma membrane 30.72 20.24
CDY15970 Canola cytosol 3.17 20.21
EER95949 Sorghum mitochondrion 22.37 20.21
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 24.04 20.14
TraesCS1B01G073100.1 Wheat cytosol 20.37 20.13
HORVU6Hr1G014310.1 Barley mitochondrion 23.04 20.09
TraesCS1D01G055300.1 Wheat cytosol 20.7 20.06
TraesCS6D01G290900.1 Wheat mitochondrion 24.54 20.05
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 22.2 20.03
OQU82832 Sorghum cytosol 9.52 19.93
TraesCS1D01G068900.1 Wheat mitochondrion 27.05 19.93
TraesCS1B01G086000.1 Wheat plastid 22.7 19.83
TraesCS1B01G085400.1 Wheat cytosol 21.2 19.81
TraesCS1B01G038400.1 Wheat cytosol 20.03 19.74
TraesCS6D01G047700.1 Wheat mitochondrion 22.7 19.68
TraesCS1B01G075300.1 Wheat cytosol 19.53 19.6
TraesCS1A01G054800.1 Wheat cytosol 19.03 19.59
TraesCS1A01G031700.1 Wheat plastid 24.21 19.57
Bra027656.1-P Field mustard cytosol 30.72 19.55
TraesCS1B01G072300.1 Wheat plastid 18.53 19.54
TraesCS1B01G085900.1 Wheat mitochondrion 26.54 19.53
TraesCS1A01G073800.1 Wheat mitochondrion 10.85 19.52
Os08t0107800-01 Rice mitochondrion 20.2 19.39
TraesCS1B01G315500.1 Wheat mitochondrion 10.35 19.31
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 23.04 19.3
TraesCS1D01G057800.1 Wheat mitochondrion 11.69 19.28
TraesCS6B01G114300.1 Wheat cytosol 12.52 19.28
Os08t0107700-01 Rice cytosol, mitochondrion 12.02 19.25
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 22.37 19.23
TraesCS1A01G067600.1 Wheat mitochondrion 26.04 19.19
EES09203 Sorghum cytosol 25.54 19.17
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 22.87 19.16
HORVU0Hr1G035310.1 Barley cytosol 18.53 19.07
TraesCS1A01G067400.1 Wheat mitochondrion 26.21 19.03
KXG27690 Sorghum cytosol, plastid 23.21 19.02
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 10.85 19.01
TraesCS1B01G072400.1 Wheat cytosol 22.04 18.99
TraesCS1D01G068500.1 Wheat mitochondrion 25.71 18.97
Os10t0495200-01 Rice mitochondrion 24.71 18.93
TraesCS1D01G076500.1 Wheat mitochondrion 20.87 18.83
TraesCS2D01G532500.1 Wheat plastid 21.37 18.82
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 20.03 18.78
Zm00001d009733_P001 Maize cytosol 24.87 18.74
TraesCS6A01G014600.1 Wheat cytosol 12.35 18.73
Os10t0497300-01 Rice mitochondrion 24.71 18.64
TraesCS1D01G068400.1 Wheat mitochondrion 25.54 18.59
TraesCS1B01G039700.1 Wheat cytosol 18.86 18.59
TraesCS2A01G531000.1 Wheat golgi 21.04 18.56
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 25.71 18.55
EES07882 Sorghum cytosol 24.04 18.53
TraesCS2D01G533000.1 Wheat cytosol, extracellular 20.37 18.51
TraesCS1B01G038500.1 Wheat mitochondrion 24.37 18.48
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 24.04 18.46
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 24.37 18.43
OQU82831 Sorghum cytosol 18.86 18.43
TraesCS1A01G031600.1 Wheat cytosol 20.37 18.43
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 20.7 18.43
TraesCS1D01G056200.1 Wheat mitochondrion 25.21 18.3
TraesCS2B01G560300.1 Wheat cytosol 17.36 18.28
TraesCS2A01G526200.1 Wheat golgi 20.7 18.21
TraesCS1D01G069100.1 Wheat mitochondrion 19.53 18.2
TraesCS1B01G085300.1 Wheat mitochondrion 24.04 18.18
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 23.87 18.17
OQU80148 Sorghum mitochondrion 22.04 18.16
TraesCS1A01G067000.1 Wheat mitochondrion 21.7 18.16
HORVU6Hr1G002890.6 Barley cytosol, plastid 24.04 18.11
OQU82823 Sorghum cytosol 24.04 18.07
TraesCS6A01G311600.1 Wheat mitochondrion 25.21 18.06
Zm00001d007534_P001 Maize plastid 23.37 18.02
TraesCS1D01G068800.1 Wheat plastid 24.54 18.01
HORVU1Hr1G014040.1 Barley mitochondrion 25.04 18.01
OQU82827 Sorghum cytosol 23.87 17.94
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 20.87 17.88
TraesCS2D01G532300.1 Wheat plastid 23.21 17.87
HORVU6Hr1G076780.7 Barley mitochondrion 24.54 17.84
TraesCS1A01G057300.1 Wheat cytosol 21.37 17.83
OQU82836 Sorghum cytosol 18.2 17.81
TraesCS1B01G071600.1 Wheat mitochondrion 25.21 17.81
TraesCS1B01G039100.1 Wheat mitochondrion 23.21 17.75
TraesCS1A01G054700.2 Wheat mitochondrion 24.04 17.73
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 21.2 17.71
TraesCS2B01G559900.1 Wheat cytosol 16.03 17.71
TraesCS2D01G532400.1 Wheat cytosol 18.03 17.68
TraesCS1B01G084800.1 Wheat cytosol 13.69 17.67
Os10t0497432-01 Rice mitochondrion 7.85 17.67
KXG19780 Sorghum cytosol 17.36 17.6
KXG35774 Sorghum cytosol, mitochondrion 13.86 17.55
TraesCS2D01G532100.1 Wheat mitochondrion 20.2 17.49
TraesCS1B01G092500.1 Wheat mitochondrion 22.7 17.37
KXG28799 Sorghum plastid 22.04 17.37
Zm00001d007531_P001 Maize plastid 23.54 17.32
Zm00001d007555_P001 Maize plastid 23.54 17.32
TraesCS1A01G054500.1 Wheat mitochondrion 22.54 17.31
OQU82856 Sorghum cytosol 21.7 17.29
TraesCS2D01G532600.1 Wheat plastid 22.37 17.27
HORVU1Hr1G004750.6 Barley plastid 22.87 17.17
TraesCS1A01G073700.1 Wheat cytosol 11.02 17.14
HORVU1Hr1G011150.1 Barley cytosol, plastid 25.21 17.1
Zm00001d007548_P001 Maize plastid 23.21 17.08
HORVU1Hr1G010970.1 Barley mitochondrion 23.54 17.07
TraesCS2A01G531100.1 Wheat cytosol 16.19 17.05
Zm00001d007559_P001 Maize plastid 23.21 17.01
HORVU0Hr1G031920.1 Barley plastid 24.37 16.98
TraesCS1B01G039200.1 Wheat mitochondrion 22.2 16.96
TraesCS1B01G072900.2 Wheat mitochondrion 24.71 16.95
HORVU1Hr1G013810.1 Barley plastid 23.71 16.92
Bra016758.1-P Field mustard plastid 32.39 16.74
TraesCS2A01G530600.1 Wheat cytosol 21.37 16.73
HORVU1Hr1G011160.2 Barley cytosol, plastid 24.87 16.65
TraesCS1A01G055800.1 Wheat mitochondrion 21.37 16.6
TraesCS1D01G076900.1 Wheat plastid 18.2 16.59
Os04t0349600-01 Rice plastid 10.68 16.54
TraesCS2B01G560700.1 Wheat plastid 21.2 16.47
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 21.04 16.45
TraesCS1D01G068700.1 Wheat cytosol 12.02 16.4
HORVU1Hr1G014060.1 Barley plastid 24.21 16.29
HORVU1Hr1G010890.5 Barley cytosol 24.37 16.26
Os08t0110200-01 Rice mitochondrion 21.37 16.04
TraesCS1A01G073600.1 Wheat mitochondrion 10.35 15.82
HORVU1Hr1G011300.3 Barley plastid 24.21 15.76
CDY31277 Canola plastid 25.21 15.75
Zm00001d009735_P001 Maize cytosol 24.87 15.31
OQU82833 Sorghum cytosol 11.35 15.18
HORVU1Hr1G011400.44 Barley plastid 15.36 14.94
TraesCS1D01G058500.1 Wheat plastid 13.69 14.39
TraesCS1A01G056000.1 Wheat cytosol 9.52 14.18
Os04t0351333-00 Rice cytosol 20.53 13.99
TraesCS1D01G056600.1 Wheat mitochondrion 4.67 13.86
TraesCS6B01G341800.2 Wheat cytosol 9.18 13.78
TraesCS1D01G076700.1 Wheat cytosol 7.68 13.77
OQU82834 Sorghum cytosol 22.04 13.71
TraesCS1D01G033000.1 Wheat cytosol 9.18 13.61
TraesCS1D01G067600.1 Wheat cytosol 8.18 13.42
TraesCS6B01G129100.1 Wheat cytosol, plastid 6.34 13.19
TraesCS1D01G076400.1 Wheat cytosol 7.85 12.95
TraesCS1A01G066600.1 Wheat mitochondrion 5.68 12.93
TraesCS1A01G055500.1 Wheat mitochondrion 4.67 12.9
TraesCS1A01G074000.1 Wheat mitochondrion 6.01 12.72
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 4.84 12.72
TraesCS1A01G067800.1 Wheat cytosol 7.85 12.57
TraesCS1B01G038600.1 Wheat cytosol 7.35 12.12
TraesCS1A01G055600.1 Wheat cytosol 6.51 12.0
TraesCS2D01G532200.1 Wheat cytosol 5.84 11.95
CDY34680 Canola cytosol 17.86 11.73
TraesCS1D01G057700.1 Wheat cytosol 6.18 11.38
TraesCS1B01G038300.1 Wheat plastid 10.18 11.17
OQU88581 Sorghum cytosol 18.53 10.21
CDY21063 Canola plastid 2.17 2.37
Protein Annotations
EnsemblPlants:PGSC0003DMT400053182EnsemblPlantsGene:PGSC0003DMG400020643Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149PANTHER:PTHR44149:SF3
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PGSC:PGSC0003DMG400020643SUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI000296D147UniProt:M1BUJ4MapMan:35.1::
Description
PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020643]
Coordinates
chr6:-:2536645..2538530
Molecular Weight (calculated)
67391.6 Da
IEP (calculated)
9.436
GRAVY (calculated)
-0.136
Length
599 amino acids
Sequence
(BLAST)
001: MSSTGATNQK KNPNSKEEAV YKFLAKLGHT EIQPLKKMKR ISLRSCNGIP FISSISGSAF TFRACSSCHY SNKSISVKDK LGVNSGNLDD AVTLFHQMVR
101: MKPLPSVVDF SKLFKTMISM KHYSPVLSLF RQMWKLGIPI NGFILTSVIN SYCLMHRADF GFSVLPIYLK NGIPFNSVTF TTLIRGIFAE NKVKDAVELF
201: KKLVREKICD PDEIMYATVM NGLSKRGHTQ KTLSLLRLME QGNTEPNIYI YNIVIDALCK DGNLDAAINI LNEMKQKDVL PNIVTYNSII DGLCKLDGLC
301: KAGKVKDAEE VMKHMGRKRG VEPNTITYNA LMDGYCLRGQ LDRARRIFSI MIDKGIETDI ISYNILIKGY CKKKKVDEAM QLFCEISQKG SKPNNLTYNT
401: ILQGLSEVGR TGDAKQIYAE MLSAGTKPDI YSHVTLLNGY YKYGLVEEAM ALFNKLERNK EYTNIAFYSV VINGLCKNGK LHEAHAVFKK LSFIGLLPDV
501: ITYTIMINGF CLEGLFDEAK YILRKMEDNG CSPNNVTYNV IVKGFLRCNK ISEMASFMKE MDGRGFSFDA TTTGFLIDVV RENPSVLDMI PELHSKNKK
Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)
001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.