Factsheet for Os08t0107700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0497432-01	Rice	mitochondrion	38.5	54.14
Os08t0248400-01	Rice	mitochondrion	57.22	48.64
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	42.25	48.62
Os10t0495100-01	Rice	cytosol, mitochondrion	59.09	47.94
TraesCSU01G089800.1	Wheat	mitochondrion	44.92	47.86
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	31.55	46.64
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	45.99	45.38
Zm00001d018982_P001	Maize	mitochondrion	41.44	44.29
HORVU1Hr1G018190.2	Barley	cytosol	32.89	43.16
TraesCS6A01G015000.1	Wheat	mitochondrion	47.59	42.89
OQU82832	Sorghum	cytosol	31.55	41.26
TraesCSU01G090200.1	Wheat	cytosol	47.33	40.05
TraesCS6D01G076500.1	Wheat	plastid	48.13	39.74
Os10t0499500-01	Rice	mitochondrion	52.67	38.93
Os10t0497366-00	Rice	mitochondrion	41.71	38.9
Os08t0107800-01	Rice	mitochondrion	64.71	38.78
TraesCSU01G089700.1	Wheat	mitochondrion	46.79	36.31
Os08t0110200-01	Rice	mitochondrion	68.18	31.95
Os04t0349600-01	Rice	plastid	31.28	30.23
Os10t0495200-01	Rice	mitochondrion	60.16	28.77
Os10t0497300-01	Rice	mitochondrion	58.82	27.71
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	50.53	26.43
Os10t0501700-00	Rice	cytosol	31.82	26.21
HORVU6Hr1G014310.1	Barley	mitochondrion	47.86	26.06
TraesCS6D01G047700.1	Wheat	mitochondrion	47.33	25.62
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	48.13	25.17
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	47.59	24.9
TraesCS6B01G021600.1	Wheat	mitochondrion	47.33	24.72
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	46.79	24.51
Solyc06g007280.2.1	Tomato	cytosol	16.31	23.92
HORVU6Hr1G002890.6	Barley	cytosol, plastid	46.26	21.76
Zm00001d009733_P001	Maize	cytosol	45.72	21.51
KRH40513	Soybean	plastid	20.05	21.37
OQU82856	Sorghum	cytosol	42.51	21.14
OQU82827	Sorghum	cytosol	43.85	20.58
OQU82823	Sorghum	cytosol	43.05	20.2
EES07882	Sorghum	cytosol	41.71	20.08
VIT_12s0028g02320.t01	Wine grape	mitochondrion	24.6	19.29
KXG27690	Sorghum	cytosol, plastid	37.43	19.15
AT1G62914.1	Thale cress	mitochondrion	26.2	18.56
OQU80148	Sorghum	mitochondrion	35.83	18.43
EES09203	Sorghum	cytosol	39.04	18.3
AT1G63330.2	Thale cress	cytosol	27.01	18.07
KRH09084	Soybean	plastid	24.33	17.81
AT1G62670.1	Thale cress	mitochondrion	29.95	17.78
KRH39004	Soybean	cytosol	23.53	17.71
KRH39054	Soybean	cytosol	23.53	17.71
KRH39057	Soybean	cytosol	23.53	17.71
AT1G63400.1	Thale cress	cytosol, plastid	27.27	17.68
OQU82836	Sorghum	cytosol	28.61	17.48
Zm00001d009735_P001	Maize	cytosol	45.45	17.47
KRH39072	Soybean	cytosol	22.99	17.34
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	24.33	17.33
KRH39050	Soybean	mitochondrion	24.33	17.11
KRH39112	Soybean	cytosol	22.73	17.1
AT1G62930.1	Thale cress	plastid	28.61	17.01
TraesCS6D01G017800.1	Wheat	cytosol	24.33	16.95
KRH39074	Soybean	cytosol	22.46	16.9
AT1G63080.3	Thale cress	mitochondrion	27.54	16.78
VIT_14s0030g02280.t01	Wine grape	plastid	25.13	16.76
AT1G62590.1	Thale cress	mitochondrion	28.34	16.72
KRH48615	Soybean	mitochondrion	24.33	16.7
AT5G16640.1	Thale cress	mitochondrion	22.46	16.67
AT1G62910.1	Thale cress	mitochondrion	28.07	16.61
KRH39066	Soybean	cytosol	24.6	16.58
KRH41817	Soybean	mitochondrion	24.6	16.58
KRH08636	Soybean	cytosol	22.99	16.48
AT1G63070.1	Thale cress	mitochondrion	25.94	16.44
OQU82834	Sorghum	cytosol	42.25	16.41
AT1G63150.1	Thale cress	mitochondrion	27.54	16.38
Bra036649.1-P	Field mustard	cytosol	17.11	16.37
KRH08628	Soybean	plastid	24.06	16.3
KRH08639	Soybean	mitochondrion, plastid	24.6	16.28
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	21.93	16.24
KRH08277	Soybean	plastid	24.6	16.23
AT1G06580.1	Thale cress	mitochondrion	21.66	16.2
AT1G63130.1	Thale cress	mitochondrion	27.27	16.19
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	33.16	16.19
KRH31646	Soybean	cytosol	22.19	16.02
KRH08671	Soybean	cytosol, mitochondrion	23.53	15.91
KRH09121	Soybean	mitochondrion	22.46	15.73
KRH08625	Soybean	plastid	24.06	15.62
AT1G12620.1	Thale cress	cytosol, mitochondrion	25.94	15.62
KRH40400	Soybean	plastid	24.06	15.6
AT3G16710.1	Thale cress	mitochondrion	21.12	15.58
AT1G12300.1	Thale cress	mitochondrion	26.47	15.54
KRH09097	Soybean	plastid	24.06	15.44
AT3G22470.1	Thale cress	cytosol, mitochondrion	25.4	15.35
KRH08607	Soybean	cytosol	22.99	15.33
Bra016762.1-P	Field mustard	mitochondrion	24.87	15.32
KRH17148	Soybean	mitochondrion	22.19	15.23
KRH09095	Soybean	plastid	23.8	15.21
AT1G12700.2	Thale cress	cytosol	25.13	15.21
OQU82831	Sorghum	cytosol	24.87	15.17
Bra026882.1-P	Field mustard	cytosol	21.66	15.17
AT1G62720.1	Thale cress	mitochondrion	19.52	15.05
VIT_14s0081g00280.t01	Wine grape	mitochondrion	25.67	15.02
KRH25652	Soybean	cytosol, golgi	21.66	15.0
TraesCS6D01G017700.1	Wheat	plastid	21.39	14.98
KRH09154	Soybean	mitochondrion	22.19	14.93
VIT_14s0081g00120.t01	Wine grape	plastid	23.26	14.92
Solyc06g007740.1.1	Tomato	cytosol	23.53	14.92
Bra026958.1-P	Field mustard	mitochondrion	25.4	14.91
Bra021192.1-P	Field mustard	plastid	20.05	14.88
VIT_14s0081g00270.t01	Wine grape	plastid	22.99	14.83
Bra026971.1-P	Field mustard	mitochondrion	24.87	14.79
AT1G64580.1	Thale cress	mitochondrion	20.59	14.72
Solyc06g007300.1.1	Tomato	extracellular	23.26	14.7
Bra036651.1-P	Field mustard	mitochondrion	20.86	14.58
VIT_14s0081g00110.t01	Wine grape	cytosol	18.98	14.46
AT1G64583.1	Thale cress	mitochondrion	19.79	14.45
PGSC0003DMT400025074	Potato	cytosol	21.12	14.31
PGSC0003DMT400025087	Potato	endoplasmic reticulum	18.72	14.14
Bra028267.1-P	Field mustard	mitochondrion	23.53	14.06
Bra026954.1-P	Field mustard	mitochondrion	24.33	14.0
AT1G12775.1	Thale cress	cytosol, mitochondrion	24.06	13.98
PGSC0003DMT400025067	Potato	cytosol	17.65	13.87
Bra025516.1-P	Field mustard	cytosol, mitochondrion	17.65	13.84
TraesCS6A01G083000.1	Wheat	cytosol	16.84	13.82
AT4G26800.2	Thale cress	mitochondrion, plastid	18.98	13.81
Solyc06g005220.2.1	Tomato	cytosol	14.97	13.79
PGSC0003DMT400056663	Potato	plastid	21.66	13.78
Bra027026.1-P	Field mustard	mitochondrion	19.25	13.77
PGSC0003DMT400056665	Potato	mitochondrion	21.66	13.75
AT1G62680.2	Thale cress	plastid	20.05	13.69
PGSC0003DMT400008757	Potato	cytosol	18.18	13.65
PGSC0003DMT400053185	Potato	mitochondrion	21.39	13.56
PGSC0003DMT400052971	Potato	mitochondrion	21.12	13.32
Bra027636.1-P	Field mustard	cytosol	11.5	13.27
KRH08599	Soybean	cytosol, plastid	23.26	13.0
Bra031731.1-P	Field mustard	mitochondrion	17.65	12.99
PGSC0003DMT400008760	Potato	mitochondrion	20.32	12.97
PGSC0003DMT400015293	Potato	mitochondrion	21.12	12.95
PGSC0003DMT400015298	Potato	mitochondrion	21.12	12.95
Bra027658.1-P	Field mustard	cytosol, mitochondrion	18.72	12.89
KXG19780	Sorghum	cytosol	20.32	12.86
Bra026884.1-P	Field mustard	cytosol	15.78	12.85
Solyc04g080120.1.1	Tomato	extracellular	20.86	12.75
Bra026401.1-P	Field mustard	plastid	18.18	12.71
KRH09085	Soybean	mitochondrion	23.8	12.64
PGSC0003DMT400053556	Potato	mitochondrion	15.51	12.64
Os04t0351333-00	Rice	cytosol	29.68	12.63
Bra026957.1-P	Field mustard	mitochondrion	20.32	12.6
AT1G64100.2	Thale cress	cytosol	26.74	12.41
Bra027029.1-P	Field mustard	mitochondrion	8.02	12.35
AT5G41170.1	Thale cress	mitochondrion	17.38	12.33
PGSC0003DMT400053182	Potato	cytosol	19.25	12.02
KRH09082	Soybean	cytosol	13.1	12.01
PGSC0003DMT400052977	Potato	cytosol	12.03	11.57
Bra026836.1-P	Field mustard	cytosol, mitochondrion	14.97	11.41
Bra027726.1-P	Field mustard	mitochondrion	13.64	10.83
Bra027656.1-P	Field mustard	cytosol	25.94	10.31
KRH39064	Soybean	cytosol	24.33	9.39
KRH12873	Soybean	cytosol	16.84	9.05
Bra016758.1-P	Field mustard	plastid	25.94	8.37
Bra006187.1-P	Field mustard	plastid	6.42	8.25
TraesCS6B01G114300.1	Wheat	cytosol	8.56	8.23
PGSC0003DMT400008759	Potato	cytosol	6.42	7.52
VIT_14s0030g02260.t01	Wine grape	cytosol	7.49	6.32
TraesCS6A01G014600.1	Wheat	cytosol	6.42	6.08
Solyc06g007810.1.1	Tomato	cytosol	1.6	2.24
OQU82833	Sorghum	cytosol	1.07	0.89
CDX68679	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	ProteinID:BAF22714.1	ProteinID:BAT03467.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885
InterPro:IPR011990	EnsemblPlantsGene:Os08g0107700	EnsemblPlants:Os08t0107700-01	PFAM:PF01535	PFAM:PF12854	PFAM:PF13041
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF302	InterPro:Pentatricopeptide_repeat	UniProt:Q0J8K1	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0000DD938C	:	:	:	:

Description

Similar to Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS). (Os08t0107700-01)

Coordinates

chr8:-:375391..376752

Molecular Weight (calculated)

41282.4 Da

IEP (calculated)

9.817

GRAVY (calculated)

-0.112

Length

374 amino acids

Sequence
(BLAST)

001: MSRRVLSAPD GTKVSRFNLM KLQGRQEAAA AGTDSHHAHH AFDELLHRPT TSSIVDLNRA LSDAARHSPA VAISLFRRMV MVARPKVPPN LITYSVVIDC
101: CSRVGHLDLA FAALGRVIRS GWTAEAITFS PLLKALCDKK RTSEAMDIAL RRMPVLGCTP NVFSYTILLK GLCDENRSQQ ALHLLHTMMV ADDTRGGYPP
201: DVVSYNTVIN GLLREGRQLD TAYHLFDQML DQGLSPDVVT YNSIISALSK ARAMDKAAVV LVRMVKNGAM PNRITHNSLL HGYCSSGKPN DAIGVFKRMC
301: RDGVEPDVFT YNTLMGYLCK NGRSMEARKI FDSMVKRGHK PNSATYGTLL HGYATEGSLV KMHHLLDMMV RNGI

Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)

001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

Arabidopsis Description

RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.