Factsheet for VIT_12s0028g02320.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_19s0015g00430.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	VIT_19s0015g00430.t01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0081g00110.t01	Wine grape	cytosol	62.26	60.49
VIT_14s0081g00270.t01	Wine grape	plastid	73.38	60.34
VIT_14s0081g00120.t01	Wine grape	plastid	70.23	57.46
VIT_14s0030g02280.t01	Wine grape	plastid	66.04	56.15
VIT_14s0081g00280.t01	Wine grape	mitochondrion	70.86	52.9
VIT_14s0030g02260.t01	Wine grape	cytosol	40.04	43.12
CDY16031	Canola	cytosol	27.67	42.44
Bra027636.1-P	Field mustard	cytosol	28.09	41.36
CDY16002	Canola	cytosol	26.62	40.84
CDY09968	Canola	cytosol	24.95	40.48
CDX67634	Canola	cytosol	35.64	40.19
CDY03257	Canola	cytosol	32.91	40.15
KRH70370	Soybean	cytosol	45.49	39.89
Bra026882.1-P	Field mustard	cytosol	44.44	39.7
Bra036649.1-P	Field mustard	cytosol	32.49	39.64
CDY39810	Canola	cytosol	32.49	39.64
CDY06217	Canola	cytosol	24.32	39.59
KRH49698	Soybean	cytosol	46.96	39.3
Solyc06g007280.2.1	Tomato	cytosol	20.96	39.22
PGSC0003DMT400008757	Potato	cytosol	40.88	39.16
KRH58843	Soybean	nucleus	49.69	38.79
CDY51169	Canola	cytosol	34.38	38.77
Bra027029.1-P	Field mustard	mitochondrion	19.71	38.68
Solyc06g005220.2.1	Tomato	cytosol	32.91	38.67
KRH42744	Soybean	mitochondrion	49.06	38.3
AT5G16640.1	Thale cress	mitochondrion	40.46	38.29
CDY26588	Canola	extracellular	26.0	38.27
AT1G63330.2	Thale cress	cytosol	44.44	37.92
CDY16026	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	43.19	37.52
CDY65983	Canola	mitochondrion	33.12	37.44
PGSC0003DMT400025087	Potato	endoplasmic reticulum	38.57	37.17
Bra006187.1-P	Field mustard	plastid	22.64	37.11
CDY08386	Canola	cytosol	34.38	36.85
PGSC0003DMT400053556	Potato	mitochondrion	35.43	36.82
PGSC0003DMT400025074	Potato	cytosol	42.56	36.78
CDY46909	Canola	mitochondrion	22.43	36.64
Bra026884.1-P	Field mustard	cytosol	35.22	36.6
CDY16110	Canola	extracellular	31.45	36.59
CDY34870	Canola	mitochondrion	22.01	36.59
KRH75045	Soybean	mitochondrion	45.7	36.52
AT1G62720.1	Thale cress	mitochondrion	37.11	36.49
Bra026958.1-P	Field mustard	mitochondrion	48.64	36.42
CDX69436	Canola	plastid	37.95	36.35
CDY33797	Canola	mitochondrion	38.99	36.33
AT1G63400.1	Thale cress	cytosol, plastid	43.82	36.22
AT1G62914.1	Thale cress	mitochondrion	40.04	36.17
KRH75048	Soybean	mitochondrion	45.91	36.02
CDY26593	Canola	cytosol	45.91	35.96
AT1G64580.1	Thale cress	mitochondrion	39.41	35.95
Bra025516.1-P	Field mustard	cytosol, mitochondrion	35.85	35.85
CDY25492	Canola	mitochondrion	36.9	35.85
PGSC0003DMT400056665	Potato	mitochondrion	44.23	35.82
Solyc06g007810.1.1	Tomato	cytosol	20.13	35.82
Bra016762.1-P	Field mustard	mitochondrion	45.28	35.58
Bra021192.1-P	Field mustard	plastid	37.53	35.52
AT1G63080.3	Thale cress	mitochondrion	45.7	35.5
PGSC0003DMT400052977	Potato	cytosol	28.93	35.48
PGSC0003DMT400008759	Potato	cytosol	23.69	35.42
CDY68929	Canola	mitochondrion	45.07	35.42
CDY31272	Canola	mitochondrion	42.14	35.39
CDY34969	Canola	mitochondrion	37.53	35.38
CDX71969	Canola	cytosol	29.35	35.35
AT1G64583.1	Thale cress	mitochondrion	37.95	35.35
CDY46394	Canola	mitochondrion	35.64	35.34
CDY48949	Canola	mitochondrion	35.64	35.34
Solyc06g007300.1.1	Tomato	extracellular	43.82	35.3
Bra026971.1-P	Field mustard	mitochondrion	46.54	35.29
Bra031731.1-P	Field mustard	mitochondrion	37.53	35.24
KRH38755	Soybean	mitochondrion	43.82	35.19
PGSC0003DMT400008760	Potato	mitochondrion	43.19	35.15
AT1G12620.1	Thale cress	cytosol, mitochondrion	45.7	35.1
CDY00489	Canola	mitochondrion	42.98	34.98
CDY49646	Canola	mitochondrion	36.69	34.93
AT3G16710.1	Thale cress	mitochondrion	37.11	34.91
AT3G22470.1	Thale cress	cytosol, mitochondrion	45.28	34.9
PGSC0003DMT400025067	Potato	cytosol	34.8	34.87
Bra028267.1-P	Field mustard	mitochondrion	45.7	34.82
KRH75063	Soybean	mitochondrion, plastid	44.03	34.77
Bra036651.1-P	Field mustard	mitochondrion	38.99	34.77
CDY26565	Canola	mitochondrion	41.3	34.62
AT1G62670.1	Thale cress	mitochondrion	45.7	34.6
Bra027026.1-P	Field mustard	mitochondrion	37.74	34.42
PGSC0003DMT400052971	Potato	mitochondrion	42.77	34.4
AT1G12300.1	Thale cress	mitochondrion	45.91	34.38
CDY26607	Canola	cytosol	32.91	34.35
PGSC0003DMT400056663	Potato	plastid	42.35	34.35
AT5G41170.1	Thale cress	mitochondrion	37.95	34.35
CDY46912	Canola	mitochondrion	35.43	34.21
AT1G63130.1	Thale cress	mitochondrion	44.86	33.97
AT1G62680.2	Thale cress	plastid	38.99	33.94
Solyc06g007740.1.1	Tomato	cytosol	41.93	33.9
Bra026954.1-P	Field mustard	mitochondrion	46.12	33.85
KRH09256	Soybean	mitochondrion	39.62	33.81
VIT_05s0020g04920.t01	Wine grape	plastid	40.46	33.74
Bra026836.1-P	Field mustard	cytosol, mitochondrion	34.59	33.6
AT1G06580.1	Thale cress	mitochondrion	35.22	33.6
AT1G62590.1	Thale cress	mitochondrion	44.65	33.6
AT1G62930.1	Thale cress	plastid	44.23	33.55
AT1G12700.2	Thale cress	cytosol	43.4	33.5
PGSC0003DMT400053185	Potato	mitochondrion	41.3	33.39
Solyc04g080120.1.1	Tomato	extracellular	42.56	33.17
AT1G63070.1	Thale cress	mitochondrion	40.88	33.05
VIT_07s0141g00780.t01	Wine grape	plastid	43.4	33.01
Bra026957.1-P	Field mustard	mitochondrion	41.72	33.0
TraesCS2B01G126900.1	Wheat	cytosol	26.42	32.98
PGSC0003DMT400015293	Potato	mitochondrion	42.14	32.95
PGSC0003DMT400015298	Potato	mitochondrion	42.14	32.95
AT1G62910.1	Thale cress	mitochondrion	43.61	32.91
CDY34688	Canola	cytosol	24.95	32.87
CDY16032	Canola	mitochondrion	28.09	32.84
CDY66358	Canola	mitochondrion	26.83	32.82
CDY31271	Canola	mitochondrion	33.12	32.51
CDY34375	Canola	mitochondrion	35.22	32.5
AT1G12775.1	Thale cress	cytosol, mitochondrion	43.82	32.45
AT1G63150.1	Thale cress	mitochondrion	42.77	32.43
CDY35831	Canola	mitochondrion	34.59	32.04
CDY16003	Canola	cytosol, plastid	26.21	31.97
PGSC0003DMT400053182	Potato	cytosol	40.04	31.89
Bra027726.1-P	Field mustard	mitochondrion	31.45	31.85
Bra027658.1-P	Field mustard	cytosol, mitochondrion	36.06	31.68
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.71	31.65
HORVU1Hr1G011250.1	Barley	cytosol	19.5	31.53
CDY25519	Canola	mitochondrion, plastid	42.14	31.46
CDY47835	Canola	mitochondrion	28.72	31.35
AT4G26800.2	Thale cress	mitochondrion, plastid	33.75	31.32
CDY29251	Canola	mitochondrion	33.12	31.16
CDY33753	Canola	mitochondrion	28.3	30.41
CDY28348	Canola	mitochondrion, plastid	37.53	29.93
TraesCS1A01G067700.1	Wheat	extracellular	20.75	29.38
Bra026401.1-P	Field mustard	plastid	32.7	29.16
CDX89301	Canola	plastid	32.7	29.16
CDY25522	Canola	mitochondrion, plastid	27.04	28.86
Zm00001d018982_P001	Maize	mitochondrion	21.17	28.86
HORVU1Hr1G018190.2	Barley	cytosol	17.19	28.77
HORVU6Hr1G017870.2	Barley	mitochondrion	18.03	28.67
TraesCS6B01G127200.1	Wheat	cytosol	20.34	28.2
Os10t0501700-00	Rice	cytosol	26.62	27.97
Os08t0248400-01	Rice	mitochondrion	25.79	27.95
TraesCS1D01G058000.1	Wheat	cytosol	23.69	27.83
Os10t0495100-01	Rice	cytosol, mitochondrion	26.62	27.55
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	21.59	27.25
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	29.14	27.2
CDY16033	Canola	cytosol	8.39	26.67
TraesCS6D01G083300.1	Wheat	mitochondrion	24.74	26.46
TraesCS6A01G015000.1	Wheat	mitochondrion	22.43	25.78
AT1G64100.2	Thale cress	cytosol	42.98	25.43
CDX68680	Canola	mitochondrion	24.32	25.11
TraesCSU01G090200.1	Wheat	cytosol	23.06	24.89
OQU82832	Sorghum	cytosol	14.88	24.83
TraesCSU01G089700.1	Wheat	mitochondrion	24.95	24.69
Os10t0497366-00	Rice	mitochondrion	20.75	24.69
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	26.0	24.65
Os08t0107700-01	Rice	cytosol, mitochondrion	19.29	24.6
TraesCS7D01G231400.1	Wheat	cytosol, plastid	20.55	24.32
TraesCS6B01G127500.1	Wheat	cytosol	24.95	24.29
CDY66357	Canola	cytosol	19.29	24.27
TraesCS1B01G038200.1	Wheat	mitochondrion	32.08	24.17
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	22.22	24.15
TraesCS6D01G083400.1	Wheat	mitochondrion	24.95	24.14
KXG34536	Sorghum	mitochondrion	28.93	24.13
CDY34370	Canola	cytosol	41.51	24.12
TraesCS6D01G076500.1	Wheat	plastid	22.85	24.06
TraesCS7B01G469500.1	Wheat	cytosol	28.3	24.02
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	24.32	23.97
TraesCSU01G089800.1	Wheat	mitochondrion	17.61	23.93
Os10t0499500-01	Rice	mitochondrion	25.37	23.91
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	25.16	23.76
OQU88594	Sorghum	cytosol	26.0	23.75
TraesCS1B01G072700.1	Wheat	cytosol	25.37	23.73
TraesCS6D01G083100.1	Wheat	cytosol	24.32	23.67
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	23.27	23.08
EER95949	Sorghum	mitochondrion	31.66	22.78
TraesCS1B01G315500.1	Wheat	mitochondrion	15.3	22.74
Os08t0107800-01	Rice	mitochondrion	29.56	22.6
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	15.3	22.46
CDX81633	Canola	extracellular, golgi, plasma membrane	42.35	22.22
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	19.92	21.94
TraesCS1A01G031600.1	Wheat	cytosol	30.19	21.75
TraesCS1D01G058400.1	Wheat	cytosol	23.27	21.55
TraesCS6D01G290900.1	Wheat	mitochondrion	32.91	21.42
TraesCS1B01G092600.1	Wheat	plastid	23.06	21.28
TraesCS6D01G017800.1	Wheat	cytosol	23.9	21.23
TraesCS1B01G072300.1	Wheat	plastid	25.16	21.13
TraesCS1B01G038400.1	Wheat	cytosol	26.83	21.05
Bra027656.1-P	Field mustard	cytosol	41.51	21.04
TraesCS1A01G073800.1	Wheat	mitochondrion	14.68	21.02
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	29.14	20.93
KXG35774	Sorghum	cytosol, mitochondrion	20.75	20.93
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	30.61	20.89
TraesCS1B01G086000.1	Wheat	plastid	29.98	20.85
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	20.96	20.83
HORVU6Hr1G014310.1	Barley	mitochondrion	29.98	20.82
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	14.88	20.76
TraesCS2D01G532500.1	Wheat	plastid	29.56	20.74
TraesCS1B01G039700.1	Wheat	cytosol	26.42	20.72
TraesCS2A01G526200.1	Wheat	golgi	29.56	20.7
Os10t0497432-01	Rice	mitochondrion	11.53	20.68
TraesCS1A01G031700.1	Wheat	plastid	32.08	20.65
TraesCS2A01G531000.1	Wheat	golgi	29.35	20.62
TraesCS6A01G083000.1	Wheat	cytosol	19.71	20.61
TraesCS1D01G068600.1	Wheat	plastid	14.68	20.59
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	16.35	20.58
TraesCS2D01G532400.1	Wheat	cytosol	26.21	20.46
TraesCS6D01G047700.1	Wheat	mitochondrion	29.56	20.41
TraesCS1B01G085400.1	Wheat	cytosol	27.25	20.28
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	27.88	20.18
Os10t0497300-01	Rice	mitochondrion	33.54	20.15
TraesCS1B01G073200.1	Wheat	cytosol	12.79	20.13
TraesCS1D01G055300.1	Wheat	cytosol	26.0	20.06
TraesCS2B01G560300.1	Wheat	cytosol	23.9	20.04
TraesCS1B01G038500.1	Wheat	mitochondrion	32.91	19.87
TraesCS1D01G057800.1	Wheat	mitochondrion	15.09	19.83
TraesCS2B01G559900.1	Wheat	cytosol	22.43	19.74
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	32.7	19.7
TraesCS6B01G021600.1	Wheat	mitochondrion	29.56	19.69
EES09203	Sorghum	cytosol	32.91	19.67
OQU80148	Sorghum	mitochondrion	29.98	19.67
Os04t0349600-01	Rice	plastid	15.93	19.64
TraesCS1D01G056700.1	Wheat	cytosol	24.95	19.6
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	29.35	19.58
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	32.29	19.57
KXG27690	Sorghum	cytosol, plastid	29.98	19.56
TraesCS1B01G039100.1	Wheat	mitochondrion	32.08	19.54
TraesCS2A01G531100.1	Wheat	cytosol	23.27	19.51
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	29.14	19.44
TraesCS1D01G069100.1	Wheat	mitochondrion	26.21	19.44
TraesCS1A01G054800.1	Wheat	cytosol	23.69	19.42
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	28.93	19.33
OQU82856	Sorghum	cytosol	30.4	19.28
OQU82836	Sorghum	cytosol	24.74	19.28
OQU82831	Sorghum	cytosol	24.74	19.25
TraesCS2D01G532600.1	Wheat	plastid	31.24	19.2
Os10t0495200-01	Rice	mitochondrion	31.45	19.18
HORVU1Hr1G004750.6	Barley	plastid	32.08	19.17
TraesCS1A01G067000.1	Wheat	mitochondrion	28.72	19.13
TraesCS6D01G017700.1	Wheat	plastid	21.38	19.1
TraesCS2D01G532100.1	Wheat	mitochondrion	27.67	19.08
OQU82827	Sorghum	cytosol	31.87	19.07
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	28.51	19.02
TraesCS1B01G072400.1	Wheat	cytosol	27.67	18.99
OQU82823	Sorghum	cytosol	31.66	18.95
HORVU0Hr1G035310.1	Barley	cytosol	23.06	18.9
Bra016758.1-P	Field mustard	plastid	45.91	18.9
TraesCS1B01G039200.1	Wheat	mitochondrion	31.03	18.88
TraesCS1D01G068800.1	Wheat	plastid	32.29	18.87
TraesCS1D01G068500.1	Wheat	mitochondrion	32.08	18.84
TraesCS1B01G073100.1	Wheat	cytosol	23.9	18.81
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	30.19	18.8
TraesCS1B01G075300.1	Wheat	cytosol	23.48	18.76
TraesCS2A01G530600.1	Wheat	cytosol	29.98	18.69
TraesCS1B01G085300.1	Wheat	mitochondrion	31.03	18.69
Zm00001d007534_P001	Maize	plastid	30.4	18.66
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.95	18.62
TraesCS1A01G054500.1	Wheat	mitochondrion	30.4	18.59
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	9.85	18.58
TraesCS1A01G067600.1	Wheat	mitochondrion	31.66	18.57
HORVU6Hr1G076780.7	Barley	mitochondrion	32.08	18.57
TraesCS1B01G085900.1	Wheat	mitochondrion	31.66	18.55
TraesCS2B01G560700.1	Wheat	plastid	29.98	18.55
TraesCS6B01G114300.1	Wheat	cytosol	15.09	18.51
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	27.04	18.51
TraesCS1D01G068900.1	Wheat	mitochondrion	31.45	18.45
Zm00001d007555_P001	Maize	plastid	31.45	18.43
TraesCS6A01G311600.1	Wheat	mitochondrion	32.29	18.42
Zm00001d009733_P001	Maize	cytosol	30.61	18.36
Zm00001d007548_P001	Maize	plastid	31.24	18.3
Zm00001d007559_P001	Maize	plastid	31.24	18.24
TraesCS1D01G068400.1	Wheat	mitochondrion	31.45	18.23
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	31.66	18.19
TraesCS1A01G067400.1	Wheat	mitochondrion	31.45	18.18
Zm00001d007531_P001	Maize	plastid	31.03	18.18
KXG28799	Sorghum	plastid	28.93	18.16
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	25.58	18.13
TraesCS2D01G532300.1	Wheat	plastid	29.56	18.12
TraesCS1A01G057300.1	Wheat	cytosol	27.25	18.11
HORVU1Hr1G014040.1	Barley	mitochondrion	31.45	18.01
TraesCS1A01G054700.2	Wheat	mitochondrion	30.61	17.98
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	29.35	17.95
TraesCS1D01G076500.1	Wheat	mitochondrion	24.95	17.92
EES07882	Sorghum	cytosol	29.14	17.89
CDY31277	Canola	plastid	35.64	17.73
HORVU6Hr1G002890.6	Barley	cytosol, plastid	29.14	17.48
Os08t0110200-01	Rice	mitochondrion	29.14	17.42
HORVU1Hr1G013810.1	Barley	plastid	30.61	17.4
TraesCS1B01G071600.1	Wheat	mitochondrion	30.61	17.22
HORVU1Hr1G010970.1	Barley	mitochondrion	29.77	17.19
TraesCS1B01G092500.1	Wheat	mitochondrion	28.09	17.11
HORVU1Hr1G014060.1	Barley	plastid	31.45	16.85
TraesCS1D01G076900.1	Wheat	plastid	23.06	16.74
HORVU0Hr1G031920.1	Barley	plastid	29.98	16.63
TraesCS1B01G072900.2	Wheat	mitochondrion	30.4	16.61
TraesCS1D01G056200.1	Wheat	mitochondrion	28.72	16.61
KXG19780	Sorghum	cytosol	20.55	16.58
HORVU1Hr1G010890.5	Barley	cytosol	30.19	16.04
HORVU1Hr1G011160.2	Barley	cytosol, plastid	29.98	15.98
TraesCS1A01G055800.1	Wheat	mitochondrion	25.79	15.95
TraesCS1D01G068700.1	Wheat	cytosol	14.68	15.95
HORVU1Hr1G011300.3	Barley	plastid	30.61	15.87
HORVU1Hr1G011150.1	Barley	cytosol, plastid	29.35	15.86
TraesCS1B01G084800.1	Wheat	cytosol	15.3	15.73
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	23.27	15.48
TraesCS6A01G014600.1	Wheat	cytosol	12.79	15.44
Zm00001d009735_P001	Maize	cytosol	31.45	15.42
TraesCS1A01G073600.1	Wheat	mitochondrion	12.58	15.31
Os04t0351333-00	Rice	cytosol	28.09	15.24
TraesCS1A01G074000.1	Wheat	mitochondrion	9.01	15.19
TraesCS1A01G073700.1	Wheat	cytosol	12.16	15.06
TraesCS1D01G056600.1	Wheat	mitochondrion	6.29	14.85
TraesCS1D01G076400.1	Wheat	cytosol	10.9	14.33
OQU82834	Sorghum	cytosol	28.72	14.23
TraesCS1D01G076700.1	Wheat	cytosol	9.64	13.77
CDY34680	Canola	cytosol	26.21	13.71
OQU82833	Sorghum	cytosol	12.79	13.62
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	6.5	13.6
TraesCS6B01G129100.1	Wheat	cytosol, plastid	8.18	13.54
TraesCS1D01G033000.1	Wheat	cytosol	11.11	13.12
TraesCS6B01G341800.2	Wheat	cytosol	10.69	12.78
TraesCS1A01G066600.1	Wheat	mitochondrion	6.92	12.55
TraesCS1D01G058500.1	Wheat	plastid	14.68	12.28
TraesCS1A01G056000.1	Wheat	cytosol	10.27	12.19
HORVU1Hr1G011400.44	Barley	plastid	15.09	11.69
TraesCS1A01G055500.1	Wheat	mitochondrion	5.24	11.52
TraesCS1B01G038300.1	Wheat	plastid	12.58	10.99
TraesCS1A01G067800.1	Wheat	cytosol	8.39	10.7
OQU88581	Sorghum	cytosol	24.11	10.58
TraesCS1B01G038600.1	Wheat	cytosol	7.55	9.92
TraesCS1D01G067600.1	Wheat	cytosol	7.34	9.59
TraesCS2D01G532200.1	Wheat	cytosol	5.66	9.22
CDY26589	Canola	cytosol	1.26	8.7
TraesCS1A01G055600.1	Wheat	cytosol	5.45	8.0
CDY15970	Canola	cytosol	1.47	7.45
TraesCS1D01G057700.1	Wheat	cytosol	3.98	5.85
CDY21063	Canola	plastid	0.63	0.55

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100852554	wikigene:100852554	MapMan:35.1	ProteinID:CCB47359	ProteinID:CCB47359.1
UniProt:F6H4Z1	EMBL:FN595235	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987
GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EntrezGene:LOC100852554
wikigene:LOC100852554	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1594
InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002108FF2	ArrayExpress:VIT_12s0028g02320	EnsemblPlantsGene:VIT_12s0028g02320
EnsemblPlants:VIT_12s0028g02320.t01	RefSeq:XP_003633275	RefSeq:XP_003633275.1	:	:	:

Description

No Description!

Coordinates

chr12:+:3072679..3074174

Molecular Weight (calculated)

53677.0 Da

IEP (calculated)

7.479

GRAVY (calculated)

0.126

Length

477 amino acids

Sequence
(BLAST)

001: MLRMRPPPSI VDFSKLLTSI TRMKHYSTVL SLYKQMDSFG IPHNTYTLNI LINSFCHLNR LGFAFSVLGD ILKLGYQPST ATFTTLIRGL CVEGKIGEAL
101: QLFDKMTGEG FQPDVLTYGT LINGLCKVGN TSTAIRFLRS MEQRNCRPTV VVYSTIIDSL CKDRQLTEAL SLFSDMLAKG ISPNNFTYSS LIHGLCILGH
201: WKEAIRLFYA MIHRKIMPDQ LTFNTLVDAL CKEGMVVKAH YVVDVMIQSD LKPDVVTYNS LMDGHCLRSE MGKTVNVFDT MVRKGCVPSV ISYTTLINGY
301: CKIQIMDKAM GLFEEMSQQG LIPDTVTYNT LIHGLCHVGR LRDAIALFHE MVVYGQIPDL VTYRILFDYL CKNHRLAEAM VLLKVIEGTN LDPDIHIYSI
401: VMDGMCRAGE LEAARDLFSK LSSKGLHPDV RTYTIMINGL CQQGLLAEAS KLFGEMDEND IESYSTFSRN AFKGIFY

Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)

001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS

Arabidopsis Description

ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.