Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0028g02320.t01 | Wine grape | mitochondrion | 33.01 | 43.4 |
| VIT_14s0081g00110.t01 | Wine grape | cytosol | 33.49 | 42.77 |
| VIT_14s0081g00120.t01 | Wine grape | plastid | 39.23 | 42.2 |
| VIT_14s0081g00270.t01 | Wine grape | plastid | 37.0 | 40.0 |
| VIT_05s0020g04920.t01 | Wine grape | plastid | 34.61 | 37.94 |
| VIT_14s0030g02280.t01 | Wine grape | plastid | 33.81 | 37.79 |
| VIT_14s0081g00280.t01 | Wine grape | mitochondrion | 38.44 | 37.72 |
| VIT_14s0030g02260.t01 | Wine grape | cytosol | 23.76 | 33.63 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100244169 | wikigene:100244169 | MapMan:35.1 | ProteinID:CBI17955 | ProteinID:CBI17955.3 |
| UniProt:D7SQM4 | EMBL:FN594965 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | EntrezGene:LOC100244169 |
| wikigene:LOC100244169 | PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFscan:PS51375 | InterPro:Pentatricopeptide_repeat |
| SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0001BE12D1 | ArrayExpress:VIT_07s0141g00780 | EnsemblPlantsGene:VIT_07s0141g00780 |
| EnsemblPlants:VIT_07s0141g00780.t01 | RefSeq:XP_002275680 | RefSeq:XP_002275680.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:-:447095..449091
Molecular Weight (calculated)
69909.2 Da
IEP (calculated)
7.169
GRAVY (calculated)
-0.100
Length
627 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVRTSPCSS SASAISSSRT TPRCKLSSLF EHPHRPISPG PISLTKDTVS NAPDRGQLEN FLKSNCKSGH IKRSEAFSVF NHLIDMQPTP PISSFNTLLG
101: AVAKIKRYFD VISLYKRMSL IGLAPDFITL NILINCYCNL NKVDFGLAVL GEMLRRGHSP NTVTFTSLVK GLCLGSRISE ATGLLRKMVR MGYRPNVVTY
201: GTLLNGLCMT GNTMLAVKLH EEMLNGNGGF GVTIKPNLVC YCTIIDSLCK DGLIDKGKEL FLEMKGRGIS PDVVAYSSII HGMCHTGRWE GAKGLFNEMV
301: DEGVHPNVVT FNVLIDALCK AGKMEEANHL LKLMIQRGES PDTFTYNTLI DGFCLEGRID DARDLFVSME SKGIETDAVS YNVLINGYCK SGRMVEAKKL
401: YREMMCKEIM PTVITYNTLL TGLFREGKVR DAWNLFGEMK VHDLTPESCT YNILLDGLCK NNHLSEAMEL FHYLENHDFQ PSIQIFNCLI DGLCKARKIE
501: IARELFNRLS HEGLEPNVIT YTVMIHGLCK SGQLENAKDL FLGMEEKGCA PNLVTFNTLM RGFCQNDEMQ KVVELLQEMA EKDFSPDAST ISIVVDLLSK
601: DEKYREYLHL LPTFPAQGQT GRGYEKS
101: AVAKIKRYFD VISLYKRMSL IGLAPDFITL NILINCYCNL NKVDFGLAVL GEMLRRGHSP NTVTFTSLVK GLCLGSRISE ATGLLRKMVR MGYRPNVVTY
201: GTLLNGLCMT GNTMLAVKLH EEMLNGNGGF GVTIKPNLVC YCTIIDSLCK DGLIDKGKEL FLEMKGRGIS PDVVAYSSII HGMCHTGRWE GAKGLFNEMV
301: DEGVHPNVVT FNVLIDALCK AGKMEEANHL LKLMIQRGES PDTFTYNTLI DGFCLEGRID DARDLFVSME SKGIETDAVS YNVLINGYCK SGRMVEAKKL
401: YREMMCKEIM PTVITYNTLL TGLFREGKVR DAWNLFGEMK VHDLTPESCT YNILLDGLCK NNHLSEAMEL FHYLENHDFQ PSIQIFNCLI DGLCKARKIE
501: IARELFNRLS HEGLEPNVIT YTVMIHGLCK SGQLENAKDL FLGMEEKGCA PNLVTFNTLM RGFCQNDEMQ KVVELLQEMA EKDFSPDAST ISIVVDLLSK
601: DEKYREYLHL LPTFPAQGQT GRGYEKS
001: MFVGYRAKTN NSAEEIMMIK RSITTNMKAL RLIQPHLLKT GSLRTDLLCT ISSFFSSCER DFSSISNGNV CFRERLRSGI VDIKKDDAIA LFQEMIRSRP
101: LPSLVDFSRF FSAIARTKQF NLVLDFCKQL ELNGIAHNIY TLNIMINCFC RCCKTCFAYS VLGKVMKLGY EPDTTTFNTL IKGLFLEGKV SEAVVLVDRM
201: VENGCQPDVV TYNSIVNGIC RSGDTSLALD LLRKMEERNV KADVFTYSTI IDSLCRDGCI DAAISLFKEM ETKGIKSSVV TYNSLVRGLC KAGKWNDGAL
301: LLKDMVSREI VPNVITFNVL LDVFVKEGKL QEANELYKEM ITRGISPNII TYNTLMDGYC MQNRLSEANN MLDLMVRNKC SPDIVTFTSL IKGYCMVKRV
401: DDGMKVFRNI SKRGLVANAV TYSILVQGFC QSGKIKLAEE LFQEMVSHGV LPDVMTYGIL LDGLCDNGKL EKALEIFEDL QKSKMDLGIV MYTTIIEGMC
501: KGGKVEDAWN LFCSLPCKGV KPNVMTYTVM ISGLCKKGSL SEANILLRKM EEDGNAPNDC TYNTLIRAHL RDGDLTASAK LIEEMKSCGF SADASSIKMV
601: IDMLLSGELD KSFLDMLS
101: LPSLVDFSRF FSAIARTKQF NLVLDFCKQL ELNGIAHNIY TLNIMINCFC RCCKTCFAYS VLGKVMKLGY EPDTTTFNTL IKGLFLEGKV SEAVVLVDRM
201: VENGCQPDVV TYNSIVNGIC RSGDTSLALD LLRKMEERNV KADVFTYSTI IDSLCRDGCI DAAISLFKEM ETKGIKSSVV TYNSLVRGLC KAGKWNDGAL
301: LLKDMVSREI VPNVITFNVL LDVFVKEGKL QEANELYKEM ITRGISPNII TYNTLMDGYC MQNRLSEANN MLDLMVRNKC SPDIVTFTSL IKGYCMVKRV
401: DDGMKVFRNI SKRGLVANAV TYSILVQGFC QSGKIKLAEE LFQEMVSHGV LPDVMTYGIL LDGLCDNGKL EKALEIFEDL QKSKMDLGIV MYTTIIEGMC
501: KGGKVEDAWN LFCSLPCKGV KPNVMTYTVM ISGLCKKGSL SEANILLRKM EEDGNAPNDC TYNTLIRAHL RDGDLTASAK LIEEMKSCGF SADASSIKMV
601: IDMLLSGELD KSFLDMLS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.