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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G560300.1 Wheat cytosol 75.8 74.87
TraesCS2A01G531000.1 Wheat golgi 85.05 70.4
TraesCS2B01G559900.1 Wheat cytosol 66.9 69.37
TraesCS2B01G560700.1 Wheat plastid 88.79 64.72
TraesCS2B01G126900.1 Wheat cytosol 39.5 58.12
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 44.31 56.72
TraesCS6B01G127200.1 Wheat cytosol 28.65 46.8
TraesCS1B01G073200.1 Wheat cytosol 24.73 45.87
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 53.91 45.63
TraesCS1B01G085400.1 Wheat cytosol 50.71 44.46
TraesCS1B01G072400.1 Wheat cytosol 54.98 44.46
TraesCS1B01G075300.1 Wheat cytosol 46.98 44.22
TraesCS1B01G038400.1 Wheat cytosol 47.33 43.75
TraesCS1B01G039700.1 Wheat cytosol 46.8 43.26
TraesCS1B01G072700.1 Wheat cytosol 38.97 42.94
TraesCS1B01G038200.1 Wheat mitochondrion 47.69 42.34
TraesCS1B01G073100.1 Wheat cytosol 45.2 41.91
TraesCS1B01G086000.1 Wheat plastid 50.18 41.11
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 55.16 39.74
TraesCS1B01G085300.1 Wheat mitochondrion 54.45 38.64
TraesCS1B01G038500.1 Wheat mitochondrion 54.27 38.61
TraesCS1B01G084800.1 Wheat cytosol 31.85 38.58
TraesCS1B01G039100.1 Wheat mitochondrion 53.56 38.44
TraesCS1B01G039200.1 Wheat mitochondrion 53.2 38.14
TraesCS1B01G085900.1 Wheat mitochondrion 55.16 38.08
TraesCS6B01G127500.1 Wheat cytosol 33.1 37.96
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 33.45 37.23
TraesCS1B01G092500.1 Wheat mitochondrion 50.36 36.14
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 27.58 35.8
TraesCS1B01G072300.1 Wheat plastid 36.12 35.74
TraesCS1B01G071600.1 Wheat mitochondrion 53.56 35.5
TraesCS6B01G341800.2 Wheat cytosol 25.09 35.34
TraesCS6B01G114300.1 Wheat cytosol 24.38 35.22
TraesCS1B01G092600.1 Wheat plastid 32.38 35.2
TraesCS1B01G072900.2 Wheat mitochondrion 54.63 35.17
TraesCS1B01G038600.1 Wheat cytosol 22.42 34.71
TraesCS1B01G315500.1 Wheat mitochondrion 19.57 34.27
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 41.1 32.31
TraesCS6B01G021600.1 Wheat mitochondrion 40.93 32.12
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 39.68 31.19
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 17.97 31.08
TraesCS1B01G038300.1 Wheat plastid 29.36 30.22
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 20.11 29.82
Solyc06g007280.2.1 Tomato cytosol 13.35 29.41
VIT_12s0028g02320.t01 Wine grape mitochondrion 24.02 28.3
PGSC0003DMT400052977 Potato cytosol 19.39 28.02
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 25.09 27.92
KRH39054 Soybean cytosol 24.56 27.77
KRH39057 Soybean cytosol 24.56 27.77
KRH39112 Soybean cytosol 24.56 27.77
Solyc06g005220.2.1 Tomato cytosol 19.93 27.59
KRH39074 Soybean cytosol 24.38 27.57
KRH39004 Soybean cytosol 24.02 27.16
KRH39072 Soybean cytosol 23.84 27.02
Bra027636.1-P Field mustard cytosol 15.48 26.85
KRH08636 Soybean cytosol 24.91 26.82
KRH40513 Soybean plastid 16.55 26.5
Bra027029.1-P Field mustard mitochondrion 11.39 26.34
VIT_14s0081g00110.t01 Wine grape cytosol 22.95 26.27
Bra006187.1-P Field mustard plastid 13.52 26.12
Bra036649.1-P Field mustard cytosol 18.15 26.09
PGSC0003DMT400008759 Potato cytosol 14.77 26.02
KRH17148 Soybean mitochondrion 25.09 25.87
KRH09082 Soybean cytosol 18.68 25.74
KRH08277 Soybean plastid 25.62 25.4
KRH08628 Soybean plastid 24.91 25.36
CDX68679 Canola cytosol 5.16 25.22
KRH48615 Soybean mitochondrion 24.38 25.14
KRH08607 Soybean cytosol 25.09 25.13
KRH09154 Soybean mitochondrion 24.73 25.0
KRH25652 Soybean cytosol, golgi 24.02 25.0
KRH08639 Soybean mitochondrion, plastid 25.09 24.96
KRH40400 Soybean plastid 25.44 24.78
KRH09084 Soybean plastid 22.42 24.66
Solyc06g007810.1.1 Tomato cytosol 11.74 24.63
PGSC0003DMT400025067 Potato cytosol 20.82 24.58
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 22.78 24.38
KRH39066 Soybean cytosol 24.02 24.32
KRH08625 Soybean plastid 24.91 24.31
KRH39050 Soybean mitochondrion 22.95 24.25
KRH08671 Soybean cytosol, mitochondrion 23.67 24.05
VIT_14s0081g00120.t01 Wine grape plastid 24.91 24.01
AT5G16640.1 Thale cress mitochondrion 21.35 23.81
KRH09121 Soybean mitochondrion 22.6 23.78
VIT_14s0081g00270.t01 Wine grape plastid 24.38 23.62
KRH31646 Soybean cytosol 21.71 23.55
PGSC0003DMT400025087 Potato endoplasmic reticulum 20.64 23.43
Bra026882.1-P Field mustard cytosol 22.24 23.41
KRH41817 Soybean mitochondrion 22.6 22.88
AT3G16710.1 Thale cress mitochondrion 20.46 22.68
Bra026884.1-P Field mustard cytosol 18.51 22.66
Bra025516.1-P Field mustard cytosol, mitochondrion 19.04 22.43
Bra021192.1-P Field mustard plastid 20.11 22.42
VIT_14s0030g02280.t01 Wine grape plastid 22.24 22.28
AT1G64583.1 Thale cress mitochondrion 20.28 22.27
KRH09097 Soybean plastid 22.95 22.13
AT1G63330.2 Thale cress cytosol 21.89 22.0
PGSC0003DMT400025074 Potato cytosol 21.53 21.92
PGSC0003DMT400008757 Potato cytosol 19.39 21.89
KRH09095 Soybean plastid 22.78 21.88
VIT_14s0081g00280.t01 Wine grape mitochondrion 24.73 21.75
Solyc06g007740.1.1 Tomato cytosol 22.78 21.69
Bra036651.1-P Field mustard mitochondrion 20.64 21.68
AT1G63080.3 Thale cress mitochondrion 23.67 21.66
AT1G62670.1 Thale cress mitochondrion 24.2 21.59
Bra027658.1-P Field mustard cytosol, mitochondrion 20.82 21.55
Bra026971.1-P Field mustard mitochondrion 24.02 21.46
AT1G06580.1 Thale cress mitochondrion 19.04 21.4
PGSC0003DMT400053185 Potato mitochondrion 22.42 21.36
PGSC0003DMT400053556 Potato mitochondrion 17.44 21.35
AT1G62680.2 Thale cress plastid 20.82 21.35
AT1G63400.1 Thale cress cytosol, plastid 21.89 21.32
Bra027026.1-P Field mustard mitochondrion 19.75 21.22
AT1G12620.1 Thale cress cytosol, mitochondrion 23.31 21.09
PGSC0003DMT400052971 Potato mitochondrion 22.24 21.08
Bra031731.1-P Field mustard mitochondrion 19.04 21.06
AT1G64580.1 Thale cress mitochondrion 19.57 21.03
AT1G62720.1 Thale cress mitochondrion 18.15 21.03
AT1G62914.1 Thale cress mitochondrion 19.75 21.02
AT1G62930.1 Thale cress plastid 23.49 20.99
AT5G41170.1 Thale cress mitochondrion 19.57 20.87
KRH08599 Soybean cytosol, plastid 24.73 20.78
Solyc06g007300.1.1 Tomato extracellular 21.89 20.78
AT1G12300.1 Thale cress mitochondrion 23.49 20.72
AT3G22470.1 Thale cress cytosol, mitochondrion 22.78 20.68
PGSC0003DMT400015293 Potato mitochondrion 22.42 20.66
PGSC0003DMT400015298 Potato mitochondrion 22.42 20.66
AT1G63130.1 Thale cress mitochondrion 23.13 20.63
AT1G63070.1 Thale cress mitochondrion 21.53 20.51
Solyc04g080120.1.1 Tomato extracellular 22.24 20.42
AT1G62910.1 Thale cress mitochondrion 22.95 20.41
PGSC0003DMT400056665 Potato mitochondrion 21.35 20.37
PGSC0003DMT400008760 Potato mitochondrion 21.17 20.31
Bra016762.1-P Field mustard mitochondrion 21.89 20.26
Bra026958.1-P Field mustard mitochondrion 22.95 20.25
TraesCS6B01G129100.1 Wheat cytosol, plastid 10.32 20.14
AT1G12700.2 Thale cress cytosol 22.06 20.06
Bra028267.1-P Field mustard mitochondrion 22.24 19.97
Bra026957.1-P Field mustard mitochondrion 21.35 19.9
PGSC0003DMT400056663 Potato plastid 20.82 19.9
AT1G12775.1 Thale cress cytosol, mitochondrion 22.6 19.72
AT4G26800.2 Thale cress mitochondrion, plastid 17.97 19.65
VIT_14s0030g02260.t01 Wine grape cytosol 15.48 19.64
AT1G63150.1 Thale cress mitochondrion 21.89 19.55
AT1G62590.1 Thale cress mitochondrion 21.89 19.4
Bra026401.1-P Field mustard plastid 18.33 19.25
Bra026954.1-P Field mustard mitochondrion 22.24 19.23
PGSC0003DMT400053182 Potato cytosol 20.28 19.03
Bra027726.1-P Field mustard mitochondrion 15.48 18.47
Bra026836.1-P Field mustard cytosol, mitochondrion 16.01 18.33
KRH12873 Soybean cytosol 21.53 17.39
KRH09085 Soybean mitochondrion 21.53 17.19
AT1G64100.2 Thale cress cytosol 24.2 16.87
Bra027656.1-P Field mustard cytosol 25.27 15.09
KRH39064 Soybean cytosol 24.38 14.14
Bra016758.1-P Field mustard plastid 22.06 10.7
Protein Annotations
EnsemblPlants:TraesCS7B01G469500.1EnsemblPlantsGene:TraesCS7B01G469500Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF874
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375SEG:segSUPFAM:SSF81901
TIGRFAMs:TIGR00756MapMan:35.1::::
Description
No Description!
Coordinates
chr7B:+:726150616..726152304
Molecular Weight (calculated)
62423.8 Da
IEP (calculated)
7.811
GRAVY (calculated)
0.119
Length
562 amino acids
Sequence
(BLAST)
001: MYCCCRAGRP DLVVAFFGRL LRLGLRLDVI SLNNLLKGLC QAKRSNEALD LLLHRMPELH CAPDVFSYNI VINGCLKEGE VDKACNLFHE MPQLGVQPDV
101: VTYTSIMDAL SKSGAMDKAE VLLRQMVDQG IEPNIRTYSC LIHGYSTFGQ WKEALRVFKE MATLGVVPDV VTLSSLIDSL CKHRRTKEAR EIFDSMAAKG
201: LKPNIVSYST MLNGYVKEGS FEDMTDLFNS MVRNGIVPNH HIFNIQINAY AKRGLMDEAM HMFEVMRQQG VNPNVVDYLV VMNSLCKMGR MDAALDKFNQ
301: MVNQGVSPNK AVYQCLVLGS CSHGHFVKAK ELISEAVNRG LCSNSVFFYP VINDLCKEGK VEGKVKEAQD MFDFIVGIGH RPDVIMYTSL MDGYCLVGKV
401: EEALRVLDAM KSAGLQPDAF TYGILINGYC KIGRIDEGLS LVREISLSGV KPTTIMYNII LDGLFCSGRT VPAKEKFHKM NESAIPVGVG TYNIVLSGLC
501: KNNCTDEAIE LFKKLRAVNV KINVITLTTM ISAMFSQKNG STLALHLLSS FCHLILFAQL NI
Best Arabidopsis Sequence Match ( AT1G62910.1 )
(BLAST)
001: MQRSISLTAK RLFVHWNLQG IGNPPTVPSF FNLCGSGCWE RSFASASGDY REILRNRLSD IIKVDDAVDL FGDMVKSRPF PSIVEFNKLL SAVAKMNKFE
101: LVISLGEQMQ TLGISHDLYT YSIFINCFCR RSQLSLALAV LAKMMKLGYE PDIVTLSSLL NGYCHSKRIS DAVALVDQMV EMGYKPDTFT FTTLIHGLFL
201: HNKASEAVAL VDQMVQRGCQ PDLVTYGTVV NGLCKRGDID LALSLLKKME KGKIEADVVI YNTIIDGLCK YKHMDDALNL FTEMDNKGIR PDVFTYSSLI
301: SCLCNYGRWS DASRLLSDMI ERKINPNVVT FSALIDAFVK EGKLVEAEKL YDEMIKRSID PDIFTYSSLI NGFCMHDRLD EAKHMFELMI SKDCFPNVVT
401: YSTLIKGFCK AKRVEEGMEL FREMSQRGLV GNTVTYTTLI HGFFQARDCD NAQMVFKQMV SVGVHPNILT YNILLDGLCK NGKLAKAMVV FEYLQRSTME
501: PDIYTYNIMI EGMCKAGKVE DGWELFCNLS LKGVSPNVIA YNTMISGFCR KGSKEEADSL LKKMKEDGPL PNSGTYNTLI RARLRDGDRE ASAELIKEMR
601: SCGFAGDAST IGLVTNMLHD GRLDKSFLDM LS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g62910 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ16]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.