Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX89301 | Canola | plastid | 99.63 | 99.63 |
AT4G26800.2 | Thale cress | mitochondrion, plastid | 56.64 | 58.95 |
Bra027029.1-P | Field mustard | mitochondrion | 21.87 | 48.15 |
Bra036649.1-P | Field mustard | cytosol | 33.83 | 46.29 |
Bra025516.1-P | Field mustard | cytosol, mitochondrion | 39.25 | 44.03 |
Bra027026.1-P | Field mustard | mitochondrion | 41.31 | 42.26 |
Bra036651.1-P | Field mustard | mitochondrion | 42.24 | 42.24 |
Bra027636.1-P | Field mustard | cytosol | 25.42 | 41.98 |
Bra021192.1-P | Field mustard | plastid | 38.5 | 40.87 |
Bra006187.1-P | Field mustard | plastid | 21.68 | 39.86 |
Bra027726.1-P | Field mustard | mitochondrion | 33.46 | 38.0 |
Bra026882.1-P | Field mustard | cytosol | 35.51 | 35.58 |
Bra027658.1-P | Field mustard | cytosol, mitochondrion | 34.39 | 33.89 |
Bra016762.1-P | Field mustard | mitochondrion | 38.13 | 33.61 |
Bra026884.1-P | Field mustard | cytosol | 28.41 | 33.12 |
Bra031731.1-P | Field mustard | mitochondrion | 31.4 | 33.07 |
Bra028267.1-P | Field mustard | mitochondrion | 38.5 | 32.91 |
Bra026957.1-P | Field mustard | mitochondrion | 37.01 | 32.84 |
Bra026971.1-P | Field mustard | mitochondrion | 38.5 | 32.75 |
VIT_12s0028g02320.t01 | Wine grape | mitochondrion | 29.16 | 32.7 |
Bra026958.1-P | Field mustard | mitochondrion | 38.69 | 32.5 |
Bra026954.1-P | Field mustard | mitochondrion | 38.88 | 32.0 |
KRH70370 | Soybean | cytosol | 31.59 | 31.07 |
Bra026836.1-P | Field mustard | cytosol, mitochondrion | 27.85 | 30.35 |
KRH49698 | Soybean | cytosol | 31.96 | 30.0 |
VIT_14s0081g00270.t01 | Wine grape | plastid | 32.34 | 29.83 |
KRH09256 | Soybean | mitochondrion | 30.65 | 29.34 |
KRH75045 | Soybean | mitochondrion | 32.71 | 29.31 |
PGSC0003DMT400008759 | Potato | cytosol | 17.2 | 28.84 |
Solyc06g005220.2.1 | Tomato | cytosol | 21.87 | 28.82 |
KRH75063 | Soybean | mitochondrion, plastid | 32.34 | 28.64 |
KRH75048 | Soybean | mitochondrion | 32.52 | 28.62 |
KRH42744 | Soybean | mitochondrion | 32.52 | 28.48 |
KRH58843 | Soybean | nucleus | 32.52 | 28.48 |
VIT_14s0081g00120.t01 | Wine grape | plastid | 31.03 | 28.47 |
PGSC0003DMT400052977 | Potato | cytosol | 20.37 | 28.02 |
VIT_14s0081g00110.t01 | Wine grape | cytosol | 25.23 | 27.49 |
KRH38755 | Soybean | mitochondrion | 30.47 | 27.44 |
Solyc06g007810.1.1 | Tomato | cytosol | 13.64 | 27.24 |
PGSC0003DMT400008757 | Potato | cytosol | 25.23 | 27.11 |
VIT_14s0030g02280.t01 | Wine grape | plastid | 28.22 | 26.92 |
Solyc06g007280.2.1 | Tomato | cytosol | 12.34 | 25.88 |
PGSC0003DMT400008760 | Potato | mitochondrion | 28.22 | 25.77 |
PGSC0003DMT400025067 | Potato | cytosol | 22.8 | 25.63 |
PGSC0003DMT400025074 | Potato | cytosol | 26.36 | 25.54 |
VIT_14s0081g00280.t01 | Wine grape | mitochondrion | 30.47 | 25.51 |
PGSC0003DMT400025087 | Potato | endoplasmic reticulum | 23.55 | 25.45 |
PGSC0003DMT400053556 | Potato | mitochondrion | 21.68 | 25.27 |
Solyc06g007300.1.1 | Tomato | extracellular | 27.66 | 25.0 |
PGSC0003DMT400056665 | Potato | mitochondrion | 27.48 | 24.96 |
PGSC0003DMT400052971 | Potato | mitochondrion | 27.29 | 24.62 |
Solyc06g007740.1.1 | Tomato | cytosol | 27.1 | 24.58 |
PGSC0003DMT400056663 | Potato | plastid | 26.92 | 24.49 |
OQU82832 | Sorghum | cytosol | 12.9 | 24.13 |
VIT_14s0030g02260.t01 | Wine grape | cytosol | 19.81 | 23.93 |
HORVU1Hr1G011250.1 | Barley | cytosol | 13.08 | 23.73 |
TraesCS2B01G126900.1 | Wheat | cytosol | 16.82 | 23.56 |
Solyc04g080120.1.1 | Tomato | extracellular | 26.73 | 23.37 |
PGSC0003DMT400015293 | Potato | mitochondrion | 26.36 | 23.11 |
PGSC0003DMT400015298 | Potato | mitochondrion | 26.36 | 23.11 |
PGSC0003DMT400053185 | Potato | mitochondrion | 24.86 | 22.54 |
TraesCS6D01G083300.1 | Wheat | mitochondrion | 18.69 | 22.42 |
PGSC0003DMT400053182 | Potato | cytosol | 24.86 | 22.2 |
TraesCS6D01G083400.1 | Wheat | mitochondrion | 20.37 | 22.11 |
TraesCS6A01G099300.1 | Wheat | cytosol, mitochondrion | 19.81 | 21.9 |
KXG34536 | Sorghum | mitochondrion | 23.36 | 21.85 |
TraesCS6A01G099100.1 | Wheat | cytosol, mitochondrion | 15.33 | 21.69 |
TraesCS6D01G083100.1 | Wheat | cytosol | 19.25 | 21.02 |
HORVU1Hr1G010990.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 11.59 | 20.88 |
TraesCS6A01G101100.1 | Wheat | mitochondrion, plastid | 19.63 | 20.87 |
TraesCS6B01G127500.1 | Wheat | cytosol | 19.07 | 20.82 |
TraesCS6D01G089500.1 | Wheat | cytosol, mitochondrion, plastid | 18.69 | 20.79 |
TraesCS2A01G530300.1 | Wheat | mitochondrion, plastid | 19.81 | 20.74 |
TraesCS1D01G068600.1 | Wheat | plastid | 13.08 | 20.59 |
HORVU6Hr1G017870.2 | Barley | mitochondrion | 11.4 | 20.33 |
TraesCS6B01G129200.1 | Wheat | cytosol, nucleus, plastid | 19.07 | 20.2 |
TraesCS1A01G067700.1 | Wheat | extracellular | 12.71 | 20.18 |
TraesCS6B01G127200.1 | Wheat | cytosol | 12.9 | 20.06 |
Bra027656.1-P | Field mustard | cytosol | 35.14 | 19.98 |
TraesCS1D01G075800.1 | Wheat | mitochondrion, plastid | 12.71 | 19.88 |
TraesCS7D01G231400.1 | Wheat | cytosol, plastid | 14.95 | 19.85 |
Os10t0501700-00 | Rice | cytosol | 16.82 | 19.82 |
TraesCS2B01G560000.1 | Wheat | mitochondrion, plastid | 16.26 | 19.82 |
Os10t0495100-01 | Rice | cytosol, mitochondrion | 17.01 | 19.74 |
TraesCS6B01G127400.1 | Wheat | cytosol, mitochondrion | 15.89 | 19.63 |
TraesCS1D01G058000.1 | Wheat | cytosol | 14.77 | 19.46 |
Os10t0497366-00 | Rice | mitochondrion | 14.39 | 19.2 |
TraesCS1B01G315500.1 | Wheat | mitochondrion | 11.4 | 19.0 |
Zm00001d018982_P001 | Maize | mitochondrion | 12.34 | 18.86 |
Os08t0248400-01 | Rice | mitochondrion | 15.33 | 18.64 |
Os08t0107800-01 | Rice | mitochondrion | 21.68 | 18.59 |
EER95949 | Sorghum | mitochondrion | 22.99 | 18.55 |
TraesCS6A01G083000.1 | Wheat | cytosol | 15.7 | 18.42 |
TraesCS7B01G469500.1 | Wheat | cytosol | 19.25 | 18.33 |
TraesCS1B01G038200.1 | Wheat | mitochondrion | 21.68 | 18.33 |
TraesCS1D01G056600.1 | Wheat | mitochondrion | 6.92 | 18.32 |
TraesCS1D01G058400.1 | Wheat | cytosol | 17.57 | 18.25 |
Os08t0107700-01 | Rice | cytosol, mitochondrion | 12.71 | 18.18 |
TraesCSU01G090200.1 | Wheat | cytosol | 14.95 | 18.1 |
TraesCS6A01G015000.1 | Wheat | mitochondrion | 14.02 | 18.07 |
TraesCS1A01G073800.1 | Wheat | mitochondrion | 11.21 | 18.02 |
TraesCS1B01G092600.1 | Wheat | plastid | 17.38 | 17.99 |
TraesCSU01G089800.1 | Wheat | mitochondrion | 11.78 | 17.95 |
Bra016758.1-P | Field mustard | plastid | 38.69 | 17.86 |
TraesCS6B01G021200.1 | Wheat | cytosol, mitochondrion | 10.84 | 17.85 |
TraesCSU01G089700.1 | Wheat | mitochondrion | 16.07 | 17.84 |
OQU88594 | Sorghum | cytosol | 17.38 | 17.82 |
Os10t0499500-01 | Rice | mitochondrion | 16.82 | 17.79 |
Os04t0349600-01 | Rice | plastid | 12.71 | 17.57 |
HORVU2Hr1G105460.11 | Barley | mitochondrion, plastid | 15.7 | 17.5 |
TraesCS1A01G031700.1 | Wheat | plastid | 24.11 | 17.41 |
TraesCS1D01G057800.1 | Wheat | mitochondrion | 11.59 | 17.08 |
KXG27690 | Sorghum | cytosol, plastid | 23.18 | 16.96 |
TraesCS1A01G031600.1 | Wheat | cytosol | 20.93 | 16.92 |
TraesCS1B01G072300.1 | Wheat | plastid | 17.94 | 16.9 |
TraesCS6B01G021500.1 | Wheat | cytosol, mitochondrion | 11.96 | 16.89 |
TraesCS6A01G014800.1 | Wheat | cytosol, mitochondrion | 22.43 | 16.81 |
TraesCS1B01G086000.1 | Wheat | plastid | 21.5 | 16.76 |
Zm00001d007534_P001 | Maize | plastid | 24.11 | 16.6 |
EES09203 | Sorghum | cytosol | 24.67 | 16.54 |
TraesCS6D01G290900.1 | Wheat | mitochondrion | 22.62 | 16.51 |
HORVU7Hr1G029840.1 | Barley | cytosol, mitochondrion | 21.5 | 16.45 |
TraesCS1B01G072400.1 | Wheat | cytosol | 21.31 | 16.4 |
TraesCS1D01G033100.1 | Wheat | mitochondrion, plastid | 24.11 | 16.39 |
TraesCS5B01G250800.1 | Wheat | cytosol, mitochondrion | 21.87 | 16.36 |
TraesCS2A01G531000.1 | Wheat | golgi | 20.75 | 16.35 |
TraesCS6B01G021600.1 | Wheat | mitochondrion | 21.87 | 16.34 |
TraesCS1D01G069100.1 | Wheat | mitochondrion | 19.63 | 16.33 |
HORVU0Hr1G035310.1 | Barley | cytosol | 17.76 | 16.32 |
HORVU6Hr1G014310.1 | Barley | mitochondrion | 20.93 | 16.3 |
TraesCS1B01G072700.1 | Wheat | cytosol | 15.51 | 16.27 |
TraesCS1A01G074000.1 | Wheat | mitochondrion | 8.6 | 16.25 |
TraesCS1D01G056200.1 | Wheat | mitochondrion | 25.05 | 16.24 |
TraesCS6B01G114300.1 | Wheat | cytosol | 11.78 | 16.2 |
TraesCS1D01G068800.1 | Wheat | plastid | 24.67 | 16.18 |
TraesCS1D01G032300.1 | Wheat | mitochondrion, plastid | 23.93 | 16.16 |
TraesCS1B01G071600.1 | Wheat | mitochondrion | 25.61 | 16.16 |
TraesCS1A01G054700.2 | Wheat | mitochondrion | 24.49 | 16.13 |
TraesCS6D01G076500.1 | Wheat | plastid | 13.64 | 16.11 |
TraesCS6D01G017700.1 | Wheat | plastid | 16.07 | 16.1 |
OQU82856 | Sorghum | cytosol | 22.62 | 16.09 |
TraesCS6B01G045200.1 | Wheat | cytosol, mitochondrion | 21.5 | 16.08 |
TraesCS2A01G530600.1 | Wheat | cytosol | 22.99 | 16.08 |
TraesCS6D01G047700.1 | Wheat | mitochondrion | 20.75 | 16.06 |
OQU82823 | Sorghum | cytosol | 23.93 | 16.06 |
OQU82827 | Sorghum | cytosol | 23.93 | 16.06 |
Zm00001d009733_P001 | Maize | cytosol | 23.74 | 15.97 |
TraesCS1B01G075000.1 | Wheat | cytosol, mitochondrion | 19.81 | 15.96 |
HORVU1Hr1G004750.6 | Barley | plastid | 23.74 | 15.91 |
TraesCS1B01G074600.1 | Wheat | mitochondrion, plastid | 23.18 | 15.9 |
Os10t0495200-01 | Rice | mitochondrion | 23.18 | 15.86 |
TraesCS1B01G073200.1 | Wheat | cytosol | 8.97 | 15.84 |
OQU80148 | Sorghum | mitochondrion | 21.5 | 15.82 |
HORVU1Hr1G018190.2 | Barley | cytosol | 8.41 | 15.79 |
HORVU1Hr1G010970.1 | Barley | mitochondrion | 24.3 | 15.74 |
Zm00001d007555_P001 | Maize | plastid | 23.93 | 15.72 |
TraesCS2D01G532600.1 | Wheat | plastid | 22.8 | 15.72 |
TraesCS2A01G526200.1 | Wheat | golgi | 20.0 | 15.71 |
TraesCS1B01G038500.1 | Wheat | mitochondrion | 23.18 | 15.7 |
TraesCS1D01G055300.1 | Wheat | cytosol | 18.13 | 15.7 |
TraesCS1D01G068500.1 | Wheat | mitochondrion | 23.74 | 15.64 |
TraesCS1B01G039700.1 | Wheat | cytosol | 17.76 | 15.62 |
TraesCS1B01G039100.1 | Wheat | mitochondrion | 22.8 | 15.58 |
EES07882 | Sorghum | cytosol | 22.62 | 15.57 |
TraesCS2D01G532400.1 | Wheat | cytosol | 17.76 | 15.55 |
TraesCS1A01G067600.1 | Wheat | mitochondrion | 23.55 | 15.5 |
Zm00001d007531_P001 | Maize | plastid | 23.55 | 15.48 |
TraesCS2D01G533000.1 | Wheat | cytosol, extracellular | 19.07 | 15.48 |
TraesCS6D01G017800.1 | Wheat | cytosol | 15.51 | 15.46 |
TraesCS2D01G532500.1 | Wheat | plastid | 19.63 | 15.44 |
TraesCS1A01G055800.1 | Wheat | mitochondrion | 22.24 | 15.43 |
TraesCS2B01G560700.1 | Wheat | plastid | 22.24 | 15.43 |
Os04t0350000-02 | Rice | cytosol, mitochondrion, plastid | 22.06 | 15.4 |
TraesCS1A01G054500.1 | Wheat | mitochondrion | 22.43 | 15.38 |
TraesCS1D01G068900.1 | Wheat | mitochondrion | 23.36 | 15.38 |
TraesCS1D01G076900.1 | Wheat | plastid | 18.88 | 15.37 |
TraesCS1D01G076800.1 | Wheat | cytosol, mitochondrion | 6.54 | 15.35 |
HORVU1Hr1G011020.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 18.32 | 15.34 |
KXG28799 | Sorghum | plastid | 21.68 | 15.26 |
Os10t0497300-01 | Rice | mitochondrion | 22.62 | 15.24 |
KXG19780 | Sorghum | cytosol | 16.82 | 15.23 |
TraesCS1A01G055500.1 | Wheat | mitochondrion | 6.17 | 15.21 |
TraesCS2D01G532300.1 | Wheat | plastid | 22.06 | 15.17 |
HORVU0Hr1G031920.1 | Barley | plastid | 24.3 | 15.12 |
TraesCS1B01G085900.1 | Wheat | mitochondrion | 22.99 | 15.11 |
Zm00001d007548_P001 | Maize | plastid | 22.99 | 15.11 |
TraesCS1D01G068400.1 | Wheat | mitochondrion | 23.18 | 15.07 |
Zm00001d007559_P001 | Maize | plastid | 22.99 | 15.06 |
TraesCS1B01G039200.1 | Wheat | mitochondrion | 22.06 | 15.05 |
TraesCS1A01G067400.1 | Wheat | mitochondrion | 23.18 | 15.03 |
TraesCS2D01G532100.1 | Wheat | mitochondrion | 19.44 | 15.03 |
TraesCS6A01G014500.1 | Wheat | cytosol, mitochondrion | 7.1 | 15.02 |
KXG35774 | Sorghum | cytosol, mitochondrion | 13.27 | 15.01 |
TraesCS7D01G487500.1 | Wheat | cytosol, mitochondrion | 20.0 | 14.96 |
TraesCS2B01G560300.1 | Wheat | cytosol | 15.89 | 14.94 |
TraesCS1B01G075300.1 | Wheat | cytosol | 16.64 | 14.91 |
HORVU1Hr1G014040.1 | Barley | mitochondrion | 23.18 | 14.89 |
TraesCS6A01G311600.1 | Wheat | mitochondrion | 23.18 | 14.83 |
TraesCS2B01G559900.1 | Wheat | cytosol | 14.95 | 14.76 |
OQU82831 | Sorghum | cytosol | 16.82 | 14.68 |
TraesCS1D01G056700.1 | Wheat | cytosol | 16.64 | 14.66 |
TraesCS1B01G038400.1 | Wheat | cytosol | 16.64 | 14.64 |
HORVU1Hr1G010890.5 | Barley | cytosol | 24.49 | 14.59 |
HORVU6Hr1G076780.7 | Barley | mitochondrion | 22.43 | 14.56 |
HORVU1Hr1G011160.2 | Barley | cytosol, plastid | 24.3 | 14.53 |
HORVU1Hr1G011150.1 | Barley | cytosol, plastid | 23.93 | 14.5 |
TraesCS2A01G531100.1 | Wheat | cytosol | 15.33 | 14.41 |
TraesCS1B01G092500.1 | Wheat | mitochondrion | 20.93 | 14.3 |
TraesCS1A01G067000.1 | Wheat | mitochondrion | 19.07 | 14.25 |
HORVU1Hr1G014030.2 | Barley | mitochondrion, plastid | 22.06 | 14.22 |
TraesCS1B01G072900.2 | Wheat | mitochondrion | 23.18 | 14.2 |
TraesCS1B01G085300.1 | Wheat | mitochondrion | 20.93 | 14.14 |
HORVU1Hr1G011300.3 | Barley | plastid | 24.3 | 14.13 |
TraesCS1A01G054800.1 | Wheat | cytosol | 15.33 | 14.09 |
TraesCS1D01G058200.1 | Wheat | extracellular, mitochondrion | 18.32 | 14.06 |
TraesCS1B01G085400.1 | Wheat | cytosol | 16.82 | 14.04 |
TraesCS1B01G073100.1 | Wheat | cytosol | 15.89 | 14.03 |
TraesCS1D01G076500.1 | Wheat | mitochondrion | 17.38 | 14.01 |
TraesCS1A01G057300.1 | Wheat | cytosol | 18.69 | 13.93 |
TraesCS6A01G014600.1 | Wheat | cytosol | 10.28 | 13.92 |
TraesCS1A01G057400.1 | Wheat | mitochondrion, plastid | 18.5 | 13.81 |
Os08t0110200-01 | Rice | mitochondrion | 20.56 | 13.78 |
OQU82836 | Sorghum | cytosol | 15.7 | 13.73 |
HORVU6Hr1G002890.6 | Barley | cytosol, plastid | 20.37 | 13.71 |
TraesCS1D01G055500.1 | Wheat | cytosol, mitochondrion | 17.2 | 13.67 |
HORVU1Hr1G013810.1 | Barley | plastid | 21.12 | 13.47 |
HORVU1Hr1G014060.1 | Barley | plastid | 22.24 | 13.37 |
Zm00001d009735_P001 | Maize | cytosol | 24.11 | 13.26 |
TraesCS1B01G084800.1 | Wheat | cytosol | 11.4 | 13.15 |
TraesCS1A01G066600.1 | Wheat | mitochondrion | 6.36 | 12.93 |
Os10t0497432-01 | Rice | mitochondrion | 6.36 | 12.78 |
TraesCS1A01G073600.1 | Wheat | mitochondrion | 9.35 | 12.76 |
OQU82834 | Sorghum | cytosol | 22.62 | 12.56 |
HORVU1Hr1G011400.44 | Barley | plastid | 14.39 | 12.5 |
TraesCS1A01G073700.1 | Wheat | cytosol | 8.97 | 12.47 |
Os04t0351333-00 | Rice | cytosol | 20.0 | 12.17 |
TraesCS1B01G038300.1 | Wheat | plastid | 12.15 | 11.9 |
TraesCS1D01G068700.1 | Wheat | cytosol | 9.72 | 11.85 |
TraesCS6B01G129100.1 | Wheat | cytosol, plastid | 6.36 | 11.81 |
TraesCS1D01G058500.1 | Wheat | plastid | 12.34 | 11.58 |
TraesCS1D01G076700.1 | Wheat | cytosol | 7.1 | 11.38 |
TraesCS1D01G067600.1 | Wheat | cytosol | 7.48 | 10.96 |
TraesCS1A01G056000.1 | Wheat | cytosol | 8.04 | 10.7 |
OQU82833 | Sorghum | cytosol | 8.79 | 10.49 |
TraesCS6B01G341800.2 | Wheat | cytosol | 7.66 | 10.28 |
TraesCS1B01G038600.1 | Wheat | cytosol | 6.73 | 9.92 |
TraesCS1D01G033000.1 | Wheat | cytosol | 7.29 | 9.65 |
TraesCS1D01G076400.1 | Wheat | cytosol | 6.54 | 9.64 |
TraesCS1A01G067800.1 | Wheat | cytosol | 6.17 | 8.82 |
OQU88581 | Sorghum | cytosol | 17.01 | 8.37 |
TraesCS1A01G055600.1 | Wheat | cytosol | 5.05 | 8.31 |
TraesCS1D01G057700.1 | Wheat | cytosol | 4.67 | 7.69 |
TraesCS2D01G532200.1 | Wheat | cytosol | 3.74 | 6.83 |
Protein Annotations
EnsemblPlants:Bra026401.1 | EnsemblPlants:Bra026401.1-P | EnsemblPlantsGene:Bra026401 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR44149 |
PANTHER:PTHR44149:SF3 | PFAM:PF12854 | PFAM:PF13041 | PFscan:PS51375 | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 |
UniParc:UPI0002545571 | UniProt:M4EC92 | MapMan:35.1 | : | : | : |
Description
AT1G62680 (E=9e-119) | LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G63130.1); Has 26421 Blast hits to 6237 proteins in 192 species: Archae - 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants - 23373; Viruses - 0; Other Eukaryotes - 1421 (source: NCBI BLink).
Coordinates
chrA01:+:9534331..9536291
Molecular Weight (calculated)
60233.5 Da
IEP (calculated)
8.837
GRAVY (calculated)
-0.069
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MRWPIPTAIS STAKALLHRH SPKNGIIAPS FRLCKFRAFS SAVDYREILR TGLHGIKPDE AVDLFGYMAE SRPLPNIIEF NKVLTAIAKM KSYETVIRLW
101: SIVEDDEGVE ISPDIYTCNI LVKCFIRCCC HPCVAMSFLG KMMKLGVEPD VVTGSLLVNG FCQINRFDEA FYVAEQMKKM GVTLNVVVYT ILIDGLCRNR
201: FLNEAINVFG LMEKEGVAPN VFTYTSLISG LCNACKLSEA SHVLRQMISR KIDPNVVTFT TLINAYVKAG KFSEFWELYQ EMIKMSIDPN VVTYTSVING
301: LCMHNHVDRA KKAFEDMQRN GCAPNVLTYS TLANGLFKSN RFNEGIELLK EMSDSGVAEN TVSRNTLIQG CIQAGKISSA QEIFERMPSD GLPPNIRSYN
401: IVLAGLFVYG KVKKALSTYE LMQKTRNDLD IVTYTIMIHW MCKDGKADEA FKLFFSLSSK GVEPDDKAYT AMISGLKKNG MLARAHALTR AYQKYKRNRE
501: SFQSAKGCQE LRYLADRIEA FHKPTVLHQN ISKGY
101: SIVEDDEGVE ISPDIYTCNI LVKCFIRCCC HPCVAMSFLG KMMKLGVEPD VVTGSLLVNG FCQINRFDEA FYVAEQMKKM GVTLNVVVYT ILIDGLCRNR
201: FLNEAINVFG LMEKEGVAPN VFTYTSLISG LCNACKLSEA SHVLRQMISR KIDPNVVTFT TLINAYVKAG KFSEFWELYQ EMIKMSIDPN VVTYTSVING
301: LCMHNHVDRA KKAFEDMQRN GCAPNVLTYS TLANGLFKSN RFNEGIELLK EMSDSGVAEN TVSRNTLIQG CIQAGKISSA QEIFERMPSD GLPPNIRSYN
401: IVLAGLFVYG KVKKALSTYE LMQKTRNDLD IVTYTIMIHW MCKDGKADEA FKLFFSLSSK GVEPDDKAYT AMISGLKKNG MLARAHALTR AYQKYKRNRE
501: SFQSAKGCQE LRYLADRIEA FHKPTVLHQN ISKGY
001: MRWSIATAIA STAKGFLHLH HHFLKNSNPG IVLSPSLRFR FWVRAFSGTT IDYREVLRSG LHNIKFDDAF HLFVLMAYSY PLPSIVEFNK VLTAIAKMQM
101: YDVVINLWKR IENAEGIEIS PDLYTCNILV NCFCRCFQPS SALSYLGKMM KLGIEPDIVT ASSLVNGFCL SNSIKDAVYV AGQMEKMGIK RDVVVDTILI
201: DTLCKNRLVV PALEVLKRMK DRGISPNVVT YSSLITGLCK SGRLADAERR LHEMDSKKIN PNVITFSALI DAYAKRGKLS KVDSVYKMMI QMSIDPNVFT
301: YSSLIYGLCM HNRVDEAIKM LDLMISKGCT PNVVTYSTLA NGFFKSSRVD DGIKLLDDMP QRGVAANTVS CNTLIKGYFQ AGKIDLALGV FGYMTSNGLI
401: PNIRSYNIVL AGLFANGEVE KALSRFEHMQ KTRNDLDIIT YTIMIHGMCK ACMVKEAYDL FYKLKFKRVE PDFKAYTIMI AELNRAGMRT EADALNRFYQ
501: KHVRQNESAP AEVS
101: YDVVINLWKR IENAEGIEIS PDLYTCNILV NCFCRCFQPS SALSYLGKMM KLGIEPDIVT ASSLVNGFCL SNSIKDAVYV AGQMEKMGIK RDVVVDTILI
201: DTLCKNRLVV PALEVLKRMK DRGISPNVVT YSSLITGLCK SGRLADAERR LHEMDSKKIN PNVITFSALI DAYAKRGKLS KVDSVYKMMI QMSIDPNVFT
301: YSSLIYGLCM HNRVDEAIKM LDLMISKGCT PNVVTYSTLA NGFFKSSRVD DGIKLLDDMP QRGVAANTVS CNTLIKGYFQ AGKIDLALGV FGYMTSNGLI
401: PNIRSYNIVL AGLFANGEVE KALSRFEHMQ KTRNDLDIIT YTIMIHGMCK ACMVKEAYDL FYKLKFKRVE PDFKAYTIMI AELNRAGMRT EADALNRFYQ
501: KHVRQNESAP AEVS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At4g26800 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ20]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.