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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89301 Canola plastid 99.63 99.63
AT4G26800.2 Thale cress mitochondrion, plastid 56.64 58.95
Bra027029.1-P Field mustard mitochondrion 21.87 48.15
Bra036649.1-P Field mustard cytosol 33.83 46.29
Bra025516.1-P Field mustard cytosol, mitochondrion 39.25 44.03
Bra027026.1-P Field mustard mitochondrion 41.31 42.26
Bra036651.1-P Field mustard mitochondrion 42.24 42.24
Bra027636.1-P Field mustard cytosol 25.42 41.98
Bra021192.1-P Field mustard plastid 38.5 40.87
Bra006187.1-P Field mustard plastid 21.68 39.86
Bra027726.1-P Field mustard mitochondrion 33.46 38.0
Bra026882.1-P Field mustard cytosol 35.51 35.58
Bra027658.1-P Field mustard cytosol, mitochondrion 34.39 33.89
Bra016762.1-P Field mustard mitochondrion 38.13 33.61
Bra026884.1-P Field mustard cytosol 28.41 33.12
Bra031731.1-P Field mustard mitochondrion 31.4 33.07
Bra028267.1-P Field mustard mitochondrion 38.5 32.91
Bra026957.1-P Field mustard mitochondrion 37.01 32.84
Bra026971.1-P Field mustard mitochondrion 38.5 32.75
VIT_12s0028g02320.t01 Wine grape mitochondrion 29.16 32.7
Bra026958.1-P Field mustard mitochondrion 38.69 32.5
Bra026954.1-P Field mustard mitochondrion 38.88 32.0
KRH70370 Soybean cytosol 31.59 31.07
Bra026836.1-P Field mustard cytosol, mitochondrion 27.85 30.35
KRH49698 Soybean cytosol 31.96 30.0
VIT_14s0081g00270.t01 Wine grape plastid 32.34 29.83
KRH09256 Soybean mitochondrion 30.65 29.34
KRH75045 Soybean mitochondrion 32.71 29.31
PGSC0003DMT400008759 Potato cytosol 17.2 28.84
Solyc06g005220.2.1 Tomato cytosol 21.87 28.82
KRH75063 Soybean mitochondrion, plastid 32.34 28.64
KRH75048 Soybean mitochondrion 32.52 28.62
KRH42744 Soybean mitochondrion 32.52 28.48
KRH58843 Soybean nucleus 32.52 28.48
VIT_14s0081g00120.t01 Wine grape plastid 31.03 28.47
PGSC0003DMT400052977 Potato cytosol 20.37 28.02
VIT_14s0081g00110.t01 Wine grape cytosol 25.23 27.49
KRH38755 Soybean mitochondrion 30.47 27.44
Solyc06g007810.1.1 Tomato cytosol 13.64 27.24
PGSC0003DMT400008757 Potato cytosol 25.23 27.11
VIT_14s0030g02280.t01 Wine grape plastid 28.22 26.92
Solyc06g007280.2.1 Tomato cytosol 12.34 25.88
PGSC0003DMT400008760 Potato mitochondrion 28.22 25.77
PGSC0003DMT400025067 Potato cytosol 22.8 25.63
PGSC0003DMT400025074 Potato cytosol 26.36 25.54
VIT_14s0081g00280.t01 Wine grape mitochondrion 30.47 25.51
PGSC0003DMT400025087 Potato endoplasmic reticulum 23.55 25.45
PGSC0003DMT400053556 Potato mitochondrion 21.68 25.27
Solyc06g007300.1.1 Tomato extracellular 27.66 25.0
PGSC0003DMT400056665 Potato mitochondrion 27.48 24.96
PGSC0003DMT400052971 Potato mitochondrion 27.29 24.62
Solyc06g007740.1.1 Tomato cytosol 27.1 24.58
PGSC0003DMT400056663 Potato plastid 26.92 24.49
OQU82832 Sorghum cytosol 12.9 24.13
VIT_14s0030g02260.t01 Wine grape cytosol 19.81 23.93
HORVU1Hr1G011250.1 Barley cytosol 13.08 23.73
TraesCS2B01G126900.1 Wheat cytosol 16.82 23.56
Solyc04g080120.1.1 Tomato extracellular 26.73 23.37
PGSC0003DMT400015293 Potato mitochondrion 26.36 23.11
PGSC0003DMT400015298 Potato mitochondrion 26.36 23.11
PGSC0003DMT400053185 Potato mitochondrion 24.86 22.54
TraesCS6D01G083300.1 Wheat mitochondrion 18.69 22.42
PGSC0003DMT400053182 Potato cytosol 24.86 22.2
TraesCS6D01G083400.1 Wheat mitochondrion 20.37 22.11
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 19.81 21.9
KXG34536 Sorghum mitochondrion 23.36 21.85
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 15.33 21.69
TraesCS6D01G083100.1 Wheat cytosol 19.25 21.02
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 11.59 20.88
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 19.63 20.87
TraesCS6B01G127500.1 Wheat cytosol 19.07 20.82
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 18.69 20.79
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 19.81 20.74
TraesCS1D01G068600.1 Wheat plastid 13.08 20.59
HORVU6Hr1G017870.2 Barley mitochondrion 11.4 20.33
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 19.07 20.2
TraesCS1A01G067700.1 Wheat extracellular 12.71 20.18
TraesCS6B01G127200.1 Wheat cytosol 12.9 20.06
Bra027656.1-P Field mustard cytosol 35.14 19.98
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 12.71 19.88
TraesCS7D01G231400.1 Wheat cytosol, plastid 14.95 19.85
Os10t0501700-00 Rice cytosol 16.82 19.82
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 16.26 19.82
Os10t0495100-01 Rice cytosol, mitochondrion 17.01 19.74
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 15.89 19.63
TraesCS1D01G058000.1 Wheat cytosol 14.77 19.46
Os10t0497366-00 Rice mitochondrion 14.39 19.2
TraesCS1B01G315500.1 Wheat mitochondrion 11.4 19.0
Zm00001d018982_P001 Maize mitochondrion 12.34 18.86
Os08t0248400-01 Rice mitochondrion 15.33 18.64
Os08t0107800-01 Rice mitochondrion 21.68 18.59
EER95949 Sorghum mitochondrion 22.99 18.55
TraesCS6A01G083000.1 Wheat cytosol 15.7 18.42
TraesCS7B01G469500.1 Wheat cytosol 19.25 18.33
TraesCS1B01G038200.1 Wheat mitochondrion 21.68 18.33
TraesCS1D01G056600.1 Wheat mitochondrion 6.92 18.32
TraesCS1D01G058400.1 Wheat cytosol 17.57 18.25
Os08t0107700-01 Rice cytosol, mitochondrion 12.71 18.18
TraesCSU01G090200.1 Wheat cytosol 14.95 18.1
TraesCS6A01G015000.1 Wheat mitochondrion 14.02 18.07
TraesCS1A01G073800.1 Wheat mitochondrion 11.21 18.02
TraesCS1B01G092600.1 Wheat plastid 17.38 17.99
TraesCSU01G089800.1 Wheat mitochondrion 11.78 17.95
Bra016758.1-P Field mustard plastid 38.69 17.86
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 10.84 17.85
TraesCSU01G089700.1 Wheat mitochondrion 16.07 17.84
OQU88594 Sorghum cytosol 17.38 17.82
Os10t0499500-01 Rice mitochondrion 16.82 17.79
Os04t0349600-01 Rice plastid 12.71 17.57
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 15.7 17.5
TraesCS1A01G031700.1 Wheat plastid 24.11 17.41
TraesCS1D01G057800.1 Wheat mitochondrion 11.59 17.08
KXG27690 Sorghum cytosol, plastid 23.18 16.96
TraesCS1A01G031600.1 Wheat cytosol 20.93 16.92
TraesCS1B01G072300.1 Wheat plastid 17.94 16.9
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 11.96 16.89
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 22.43 16.81
TraesCS1B01G086000.1 Wheat plastid 21.5 16.76
Zm00001d007534_P001 Maize plastid 24.11 16.6
EES09203 Sorghum cytosol 24.67 16.54
TraesCS6D01G290900.1 Wheat mitochondrion 22.62 16.51
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 21.5 16.45
TraesCS1B01G072400.1 Wheat cytosol 21.31 16.4
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 24.11 16.39
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 21.87 16.36
TraesCS2A01G531000.1 Wheat golgi 20.75 16.35
TraesCS6B01G021600.1 Wheat mitochondrion 21.87 16.34
TraesCS1D01G069100.1 Wheat mitochondrion 19.63 16.33
HORVU0Hr1G035310.1 Barley cytosol 17.76 16.32
HORVU6Hr1G014310.1 Barley mitochondrion 20.93 16.3
TraesCS1B01G072700.1 Wheat cytosol 15.51 16.27
TraesCS1A01G074000.1 Wheat mitochondrion 8.6 16.25
TraesCS1D01G056200.1 Wheat mitochondrion 25.05 16.24
TraesCS6B01G114300.1 Wheat cytosol 11.78 16.2
TraesCS1D01G068800.1 Wheat plastid 24.67 16.18
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 23.93 16.16
TraesCS1B01G071600.1 Wheat mitochondrion 25.61 16.16
TraesCS1A01G054700.2 Wheat mitochondrion 24.49 16.13
TraesCS6D01G076500.1 Wheat plastid 13.64 16.11
TraesCS6D01G017700.1 Wheat plastid 16.07 16.1
OQU82856 Sorghum cytosol 22.62 16.09
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 21.5 16.08
TraesCS2A01G530600.1 Wheat cytosol 22.99 16.08
TraesCS6D01G047700.1 Wheat mitochondrion 20.75 16.06
OQU82823 Sorghum cytosol 23.93 16.06
OQU82827 Sorghum cytosol 23.93 16.06
Zm00001d009733_P001 Maize cytosol 23.74 15.97
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 19.81 15.96
HORVU1Hr1G004750.6 Barley plastid 23.74 15.91
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 23.18 15.9
Os10t0495200-01 Rice mitochondrion 23.18 15.86
TraesCS1B01G073200.1 Wheat cytosol 8.97 15.84
OQU80148 Sorghum mitochondrion 21.5 15.82
HORVU1Hr1G018190.2 Barley cytosol 8.41 15.79
HORVU1Hr1G010970.1 Barley mitochondrion 24.3 15.74
Zm00001d007555_P001 Maize plastid 23.93 15.72
TraesCS2D01G532600.1 Wheat plastid 22.8 15.72
TraesCS2A01G526200.1 Wheat golgi 20.0 15.71
TraesCS1B01G038500.1 Wheat mitochondrion 23.18 15.7
TraesCS1D01G055300.1 Wheat cytosol 18.13 15.7
TraesCS1D01G068500.1 Wheat mitochondrion 23.74 15.64
TraesCS1B01G039700.1 Wheat cytosol 17.76 15.62
TraesCS1B01G039100.1 Wheat mitochondrion 22.8 15.58
EES07882 Sorghum cytosol 22.62 15.57
TraesCS2D01G532400.1 Wheat cytosol 17.76 15.55
TraesCS1A01G067600.1 Wheat mitochondrion 23.55 15.5
Zm00001d007531_P001 Maize plastid 23.55 15.48
TraesCS2D01G533000.1 Wheat cytosol, extracellular 19.07 15.48
TraesCS6D01G017800.1 Wheat cytosol 15.51 15.46
TraesCS2D01G532500.1 Wheat plastid 19.63 15.44
TraesCS1A01G055800.1 Wheat mitochondrion 22.24 15.43
TraesCS2B01G560700.1 Wheat plastid 22.24 15.43
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 22.06 15.4
TraesCS1A01G054500.1 Wheat mitochondrion 22.43 15.38
TraesCS1D01G068900.1 Wheat mitochondrion 23.36 15.38
TraesCS1D01G076900.1 Wheat plastid 18.88 15.37
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 6.54 15.35
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 18.32 15.34
KXG28799 Sorghum plastid 21.68 15.26
Os10t0497300-01 Rice mitochondrion 22.62 15.24
KXG19780 Sorghum cytosol 16.82 15.23
TraesCS1A01G055500.1 Wheat mitochondrion 6.17 15.21
TraesCS2D01G532300.1 Wheat plastid 22.06 15.17
HORVU0Hr1G031920.1 Barley plastid 24.3 15.12
TraesCS1B01G085900.1 Wheat mitochondrion 22.99 15.11
Zm00001d007548_P001 Maize plastid 22.99 15.11
TraesCS1D01G068400.1 Wheat mitochondrion 23.18 15.07
Zm00001d007559_P001 Maize plastid 22.99 15.06
TraesCS1B01G039200.1 Wheat mitochondrion 22.06 15.05
TraesCS1A01G067400.1 Wheat mitochondrion 23.18 15.03
TraesCS2D01G532100.1 Wheat mitochondrion 19.44 15.03
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 7.1 15.02
KXG35774 Sorghum cytosol, mitochondrion 13.27 15.01
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 20.0 14.96
TraesCS2B01G560300.1 Wheat cytosol 15.89 14.94
TraesCS1B01G075300.1 Wheat cytosol 16.64 14.91
HORVU1Hr1G014040.1 Barley mitochondrion 23.18 14.89
TraesCS6A01G311600.1 Wheat mitochondrion 23.18 14.83
TraesCS2B01G559900.1 Wheat cytosol 14.95 14.76
OQU82831 Sorghum cytosol 16.82 14.68
TraesCS1D01G056700.1 Wheat cytosol 16.64 14.66
TraesCS1B01G038400.1 Wheat cytosol 16.64 14.64
HORVU1Hr1G010890.5 Barley cytosol 24.49 14.59
HORVU6Hr1G076780.7 Barley mitochondrion 22.43 14.56
HORVU1Hr1G011160.2 Barley cytosol, plastid 24.3 14.53
HORVU1Hr1G011150.1 Barley cytosol, plastid 23.93 14.5
TraesCS2A01G531100.1 Wheat cytosol 15.33 14.41
TraesCS1B01G092500.1 Wheat mitochondrion 20.93 14.3
TraesCS1A01G067000.1 Wheat mitochondrion 19.07 14.25
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 22.06 14.22
TraesCS1B01G072900.2 Wheat mitochondrion 23.18 14.2
TraesCS1B01G085300.1 Wheat mitochondrion 20.93 14.14
HORVU1Hr1G011300.3 Barley plastid 24.3 14.13
TraesCS1A01G054800.1 Wheat cytosol 15.33 14.09
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 18.32 14.06
TraesCS1B01G085400.1 Wheat cytosol 16.82 14.04
TraesCS1B01G073100.1 Wheat cytosol 15.89 14.03
TraesCS1D01G076500.1 Wheat mitochondrion 17.38 14.01
TraesCS1A01G057300.1 Wheat cytosol 18.69 13.93
TraesCS6A01G014600.1 Wheat cytosol 10.28 13.92
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 18.5 13.81
Os08t0110200-01 Rice mitochondrion 20.56 13.78
OQU82836 Sorghum cytosol 15.7 13.73
HORVU6Hr1G002890.6 Barley cytosol, plastid 20.37 13.71
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 17.2 13.67
HORVU1Hr1G013810.1 Barley plastid 21.12 13.47
HORVU1Hr1G014060.1 Barley plastid 22.24 13.37
Zm00001d009735_P001 Maize cytosol 24.11 13.26
TraesCS1B01G084800.1 Wheat cytosol 11.4 13.15
TraesCS1A01G066600.1 Wheat mitochondrion 6.36 12.93
Os10t0497432-01 Rice mitochondrion 6.36 12.78
TraesCS1A01G073600.1 Wheat mitochondrion 9.35 12.76
OQU82834 Sorghum cytosol 22.62 12.56
HORVU1Hr1G011400.44 Barley plastid 14.39 12.5
TraesCS1A01G073700.1 Wheat cytosol 8.97 12.47
Os04t0351333-00 Rice cytosol 20.0 12.17
TraesCS1B01G038300.1 Wheat plastid 12.15 11.9
TraesCS1D01G068700.1 Wheat cytosol 9.72 11.85
TraesCS6B01G129100.1 Wheat cytosol, plastid 6.36 11.81
TraesCS1D01G058500.1 Wheat plastid 12.34 11.58
TraesCS1D01G076700.1 Wheat cytosol 7.1 11.38
TraesCS1D01G067600.1 Wheat cytosol 7.48 10.96
TraesCS1A01G056000.1 Wheat cytosol 8.04 10.7
OQU82833 Sorghum cytosol 8.79 10.49
TraesCS6B01G341800.2 Wheat cytosol 7.66 10.28
TraesCS1B01G038600.1 Wheat cytosol 6.73 9.92
TraesCS1D01G033000.1 Wheat cytosol 7.29 9.65
TraesCS1D01G076400.1 Wheat cytosol 6.54 9.64
TraesCS1A01G067800.1 Wheat cytosol 6.17 8.82
OQU88581 Sorghum cytosol 17.01 8.37
TraesCS1A01G055600.1 Wheat cytosol 5.05 8.31
TraesCS1D01G057700.1 Wheat cytosol 4.67 7.69
TraesCS2D01G532200.1 Wheat cytosol 3.74 6.83
Protein Annotations
EnsemblPlants:Bra026401.1EnsemblPlants:Bra026401.1-PEnsemblPlantsGene:Bra026401Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149
PANTHER:PTHR44149:SF3PFAM:PF12854PFAM:PF13041PFscan:PS51375SUPFAM:SSF48452TIGRFAMs:TIGR00756
UniParc:UPI0002545571UniProt:M4EC92MapMan:35.1:::
Description
AT1G62680 (E=9e-119) | LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G63130.1); Has 26421 Blast hits to 6237 proteins in 192 species: Archae - 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants - 23373; Viruses - 0; Other Eukaryotes - 1421 (source: NCBI BLink).
Coordinates
chrA01:+:9534331..9536291
Molecular Weight (calculated)
60233.5 Da
IEP (calculated)
8.837
GRAVY (calculated)
-0.069
Length
535 amino acids
Sequence
(BLAST)
001: MRWPIPTAIS STAKALLHRH SPKNGIIAPS FRLCKFRAFS SAVDYREILR TGLHGIKPDE AVDLFGYMAE SRPLPNIIEF NKVLTAIAKM KSYETVIRLW
101: SIVEDDEGVE ISPDIYTCNI LVKCFIRCCC HPCVAMSFLG KMMKLGVEPD VVTGSLLVNG FCQINRFDEA FYVAEQMKKM GVTLNVVVYT ILIDGLCRNR
201: FLNEAINVFG LMEKEGVAPN VFTYTSLISG LCNACKLSEA SHVLRQMISR KIDPNVVTFT TLINAYVKAG KFSEFWELYQ EMIKMSIDPN VVTYTSVING
301: LCMHNHVDRA KKAFEDMQRN GCAPNVLTYS TLANGLFKSN RFNEGIELLK EMSDSGVAEN TVSRNTLIQG CIQAGKISSA QEIFERMPSD GLPPNIRSYN
401: IVLAGLFVYG KVKKALSTYE LMQKTRNDLD IVTYTIMIHW MCKDGKADEA FKLFFSLSSK GVEPDDKAYT AMISGLKKNG MLARAHALTR AYQKYKRNRE
501: SFQSAKGCQE LRYLADRIEA FHKPTVLHQN ISKGY
Best Arabidopsis Sequence Match ( AT4G26800.2 )
(BLAST)
001: MRWSIATAIA STAKGFLHLH HHFLKNSNPG IVLSPSLRFR FWVRAFSGTT IDYREVLRSG LHNIKFDDAF HLFVLMAYSY PLPSIVEFNK VLTAIAKMQM
101: YDVVINLWKR IENAEGIEIS PDLYTCNILV NCFCRCFQPS SALSYLGKMM KLGIEPDIVT ASSLVNGFCL SNSIKDAVYV AGQMEKMGIK RDVVVDTILI
201: DTLCKNRLVV PALEVLKRMK DRGISPNVVT YSSLITGLCK SGRLADAERR LHEMDSKKIN PNVITFSALI DAYAKRGKLS KVDSVYKMMI QMSIDPNVFT
301: YSSLIYGLCM HNRVDEAIKM LDLMISKGCT PNVVTYSTLA NGFFKSSRVD DGIKLLDDMP QRGVAANTVS CNTLIKGYFQ AGKIDLALGV FGYMTSNGLI
401: PNIRSYNIVL AGLFANGEVE KALSRFEHMQ KTRNDLDIIT YTIMIHGMCK ACMVKEAYDL FYKLKFKRVE PDFKAYTIMI AELNRAGMRT EADALNRFYQ
501: KHVRQNESAP AEVS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At4g26800 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ20]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.