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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G559900.1 Wheat cytosol 64.33 91.51
TraesCS2B01G560300.1 Wheat cytosol 65.89 89.28
TraesCS7B01G469500.1 Wheat cytosol 64.72 88.79
TraesCS2A01G531000.1 Wheat golgi 77.43 87.92
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 45.53 79.95
TraesCS2B01G126900.1 Wheat cytosol 28.27 57.07
TraesCS1B01G075300.1 Wheat cytosol 42.54 54.94
TraesCS1B01G038400.1 Wheat cytosol 43.06 54.61
TraesCS1B01G085400.1 Wheat cytosol 45.4 54.6
TraesCS1B01G039700.1 Wheat cytosol 42.93 54.44
TraesCS1B01G039200.1 Wheat mitochondrion 54.99 54.08
TraesCS1B01G085900.1 Wheat mitochondrion 57.07 54.05
TraesCS1B01G039100.1 Wheat mitochondrion 54.73 53.9
TraesCS1B01G038500.1 Wheat mitochondrion 54.99 53.67
TraesCS1B01G092500.1 Wheat mitochondrion 54.34 53.51
TraesCS1B01G073100.1 Wheat cytosol 42.02 53.47
TraesCS1B01G038300.1 Wheat plastid 37.74 53.3
TraesCS1B01G315500.1 Wheat mitochondrion 22.18 53.27
TraesCS1B01G072400.1 Wheat cytosol 47.73 52.95
TraesCS1B01G085300.1 Wheat mitochondrion 54.34 52.9
TraesCS1B01G038200.1 Wheat mitochondrion 43.32 52.76
TraesCS1B01G038600.1 Wheat cytosol 24.51 52.07
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 52.66 52.05
TraesCS6B01G341800.2 Wheat cytosol 26.85 51.88
TraesCS1B01G084800.1 Wheat cytosol 31.13 51.72
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 44.1 51.2
TraesCS1B01G086000.1 Wheat plastid 45.4 51.02
TraesCS1B01G072900.2 Wheat mitochondrion 57.07 50.4
TraesCS1B01G092600.1 Wheat plastid 33.2 49.52
TraesCS1B01G073200.1 Wheat cytosol 19.07 48.51
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 27.11 48.27
TraesCS1B01G072300.1 Wheat plastid 35.41 48.06
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 31.39 47.92
TraesCS6B01G127500.1 Wheat cytosol 30.22 47.55
TraesCS1B01G071600.1 Wheat mitochondrion 51.88 47.17
TraesCS1B01G072700.1 Wheat cytosol 30.87 46.67
TraesCS6B01G127200.1 Wheat cytosol 20.75 46.51
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 41.5 44.76
TraesCS6B01G021600.1 Wheat mitochondrion 41.25 44.41
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 40.6 43.78
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 17.12 40.62
TraesCS6B01G114300.1 Wheat cytosol 19.71 39.07
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 18.94 38.52
TraesCS6B01G129100.1 Wheat cytosol, plastid 12.97 34.72
Solyc06g007280.2.1 Tomato cytosol 10.51 31.76
KRH39074 Soybean cytosol 19.59 30.38
KRH39054 Soybean cytosol 19.46 30.18
KRH39112 Soybean cytosol 19.46 30.18
KRH39057 Soybean cytosol 19.33 29.98
VIT_12s0028g02320.t01 Wine grape mitochondrion 18.55 29.98
KRH40513 Soybean plastid 13.62 29.91
KRH39004 Soybean cytosol 19.07 29.58
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 19.33 29.5
KRH08636 Soybean cytosol 19.84 29.31
KRH09084 Soybean plastid 19.33 29.16
KRH39072 Soybean cytosol 18.68 29.03
Bra036649.1-P Field mustard cytosol 14.53 28.64
VIT_14s0081g00110.t01 Wine grape cytosol 18.16 28.51
KRH08628 Soybean plastid 20.36 28.44
KRH17148 Soybean mitochondrion 20.1 28.44
KRH08277 Soybean plastid 20.88 28.4
KRH08607 Soybean cytosol 20.62 28.34
KRH09154 Soybean mitochondrion 20.23 28.06
AT5G16640.1 Thale cress mitochondrion 18.29 27.98
KRH40400 Soybean plastid 20.88 27.9
KRH39050 Soybean mitochondrion 19.2 27.82
KRH39066 Soybean cytosol 19.97 27.75
KRH48615 Soybean mitochondrion 19.59 27.71
KRH08625 Soybean plastid 20.62 27.6
PGSC0003DMT400052977 Potato cytosol 13.88 27.51
Bra006187.1-P Field mustard plastid 10.38 27.49
KRH08639 Soybean mitochondrion, plastid 20.1 27.43
KRH08671 Soybean cytosol, mitochondrion 19.59 27.31
KRH25652 Soybean cytosol, golgi 19.07 27.22
KRH31646 Soybean cytosol 18.29 27.22
Bra027636.1-P Field mustard cytosol 11.41 27.16
KRH09121 Soybean mitochondrion 18.55 26.78
Bra036651.1-P Field mustard mitochondrion 18.55 26.73
Solyc06g005220.2.1 Tomato cytosol 14.01 26.6
VIT_14s0081g00120.t01 Wine grape plastid 20.1 26.59
AT1G62670.1 Thale cress mitochondrion 21.66 26.51
VIT_14s0081g00270.t01 Wine grape plastid 19.84 26.38
Bra027029.1-P Field mustard mitochondrion 8.3 26.34
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 17.9 26.29
Bra021192.1-P Field mustard plastid 17.12 26.19
AT3G16710.1 Thale cress mitochondrion 17.12 26.04
AT1G62680.2 Thale cress plastid 18.42 25.91
Bra026882.1-P Field mustard cytosol 17.9 25.84
PGSC0003DMT400025067 Potato cytosol 15.95 25.84
AT1G63330.2 Thale cress cytosol 18.68 25.76
AT1G62930.1 Thale cress plastid 21.01 25.76
KRH09095 Soybean plastid 19.46 25.64
KRH09097 Soybean plastid 19.33 25.56
KRH09082 Soybean cytosol 13.49 25.49
VIT_14s0030g02280.t01 Wine grape plastid 18.55 25.49
KRH41817 Soybean mitochondrion 18.29 25.41
PGSC0003DMT400008759 Potato cytosol 10.51 25.39
AT1G64583.1 Thale cress mitochondrion 16.86 25.39
Bra025516.1-P Field mustard cytosol, mitochondrion 15.69 25.37
AT1G62720.1 Thale cress mitochondrion 15.95 25.36
AT1G63080.3 Thale cress mitochondrion 20.1 25.24
AT1G64580.1 Thale cress mitochondrion 17.12 25.24
Bra027026.1-P Field mustard mitochondrion 17.12 25.24
AT1G06580.1 Thale cress mitochondrion 16.34 25.2
AT1G63400.1 Thale cress cytosol, plastid 18.81 25.13
PGSC0003DMT400025087 Potato endoplasmic reticulum 16.08 25.05
Solyc06g007810.1.1 Tomato cytosol 8.69 25.0
AT1G63070.1 Thale cress mitochondrion 19.07 24.92
Solyc04g080120.1.1 Tomato extracellular 19.71 24.84
Bra026971.1-P Field mustard mitochondrion 20.23 24.8
AT1G63130.1 Thale cress mitochondrion 20.23 24.76
PGSC0003DMT400053185 Potato mitochondrion 18.81 24.58
AT1G12300.1 Thale cress mitochondrion 20.23 24.49
AT1G12620.1 Thale cress cytosol, mitochondrion 19.71 24.48
AT1G62914.1 Thale cress mitochondrion 16.73 24.43
PGSC0003DMT400015293 Potato mitochondrion 19.33 24.43
PGSC0003DMT400015298 Potato mitochondrion 19.33 24.43
VIT_14s0081g00280.t01 Wine grape mitochondrion 20.1 24.26
AT1G62910.1 Thale cress mitochondrion 19.84 24.21
PGSC0003DMT400025074 Potato cytosol 17.25 24.09
AT3G22470.1 Thale cress cytosol, mitochondrion 19.33 24.07
Solyc06g007740.1.1 Tomato cytosol 18.42 24.07
Bra027658.1-P Field mustard cytosol, mitochondrion 16.86 23.94
AT5G41170.1 Thale cress mitochondrion 16.34 23.91
PGSC0003DMT400008757 Potato cytosol 15.43 23.9
AT1G62590.1 Thale cress mitochondrion 19.59 23.82
AT1G12775.1 Thale cress cytosol, mitochondrion 19.84 23.76
Bra026884.1-P Field mustard cytosol 14.14 23.75
Bra016762.1-P Field mustard mitochondrion 18.68 23.72
Bra026958.1-P Field mustard mitochondrion 19.59 23.7
AT1G63150.1 Thale cress mitochondrion 19.33 23.69
Bra028267.1-P Field mustard mitochondrion 19.07 23.48
CDX68679 Canola cytosol 3.5 23.48
Bra031731.1-P Field mustard mitochondrion 15.43 23.43
Bra027726.1-P Field mustard mitochondrion 14.27 23.35
PGSC0003DMT400056665 Potato mitochondrion 17.77 23.26
AT4G26800.2 Thale cress mitochondrion, plastid 15.43 23.15
Solyc06g007300.1.1 Tomato extracellular 17.77 23.14
KRH08599 Soybean cytosol, plastid 19.59 22.57
AT1G12700.2 Thale cress cytosol 18.03 22.49
PGSC0003DMT400056663 Potato plastid 17.12 22.45
PGSC0003DMT400053556 Potato mitochondrion 13.36 22.44
PGSC0003DMT400052971 Potato mitochondrion 17.25 22.43
Bra026954.1-P Field mustard mitochondrion 18.81 22.31
Bra026401.1-P Field mustard plastid 15.43 22.24
Bra026957.1-P Field mustard mitochondrion 17.38 22.22
PGSC0003DMT400008760 Potato mitochondrion 16.47 21.67
PGSC0003DMT400053182 Potato cytosol 16.47 21.2
KRH09085 Soybean mitochondrion 18.94 20.74
VIT_14s0030g02260.t01 Wine grape cytosol 11.8 20.54
Bra026836.1-P Field mustard cytosol, mitochondrion 12.97 20.37
AT1G64100.2 Thale cress cytosol 21.27 20.35
KRH12873 Soybean cytosol 17.25 19.11
Bra027656.1-P Field mustard cytosol 21.27 17.43
KRH39064 Soybean cytosol 20.62 16.41
Bra016758.1-P Field mustard plastid 18.29 12.17
Protein Annotations
EnsemblPlants:TraesCS2B01G560700.1EnsemblPlantsGene:TraesCS2B01G560700Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF874
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375SEG:segSUPFAM:SSF81901
TIGRFAMs:TIGR00756MapMan:35.1::::
Description
No Description!
Coordinates
chr2B:-:753928992..753931307
Molecular Weight (calculated)
84509.4 Da
IEP (calculated)
7.363
GRAVY (calculated)
0.115
Length
771 amino acids
Sequence
(BLAST)
001: MPAARLSSIP TSSFRASSRA PLAALAVATE RVRAGTLSRE DAHHLFDELL GQAAAVPERG LNNFLAALAR APPSAACRDG PGLAIALFNR MSRGTGARVV
101: SPTLCTYSIL MDCCCRAGRP DLVVAFFGRL LRLGLRLDVI SLSNLLKGLC QAKRSNEALD LLLHRMPELH CAPGVFSYNI VINGCLKEGE VDKACNLFHE
201: MPQLGVQPDV VTYTSIMDAL SKSGAMDKAE VLLRQMVDQG IEPNIRTYSC LIHGYSTFGQ WKEALRVFKE MATLGVVPDV VTLSSLIDSL CKHRRTKEAR
301: EIFDSMAAKG LKPNIVSYST MLNGYVKEGS FEDMTDLFNS MVRNGIVPDH HIFNIQINAY AKRGLMDEAM HMFEVMRQQG VNPDVFDYQI IMDSLCKMGR
401: MDAALDKFNQ MVNQGVSPNK AVYQCLVLGS CSHGDFVKAK ELISEAVNRG LCSNSVFFYP VINDLCKEGK VKEAQDMFDF ILGIGQRPDV IMYTSLMDGY
501: CLVGKVEKAL SVLDAMKFAG LQPDDVVYGT LLNSYCKIGR IADGLSLFRE MSLSGVKPTT IIYNIILDGL FCSGRTGSAK EKFHTMTESG IPVGVDTYNI
601: VLSGLCRNNC TDEAIELFKK LRATNVKIDV MTLNIMISAM FKTRRIEEAK DLFATISAIG LVPSVVTYSL MMTNFIKEGL LADADDTFLV MEKAGCAPNS
701: SLLNQVVRVL LEKGAVLKAA TYLAKLDAKQ LSVEVSTISL IVSLFSGEGK LREHVELLPV KYQPPQSSAD N
Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)
001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS
Arabidopsis Description
RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.