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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 3
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G63330.2 Thale cress cytosol 86.28 97.85
AT1G63400.1 Thale cress cytosol, plastid 78.71 86.48
AT1G62910.1 Thale cress mitochondrion 78.39 78.64
AT1G63150.1 Thale cress mitochondrion 77.92 78.54
AT1G63130.1 Thale cress mitochondrion 77.13 77.62
AT1G63080.3 Thale cress mitochondrion 74.13 76.55
AT1G62670.1 Thale cress mitochondrion 76.03 76.51
AT1G63070.1 Thale cress mitochondrion 71.14 76.44
AT1G62930.1 Thale cress plastid 75.71 76.31
AT1G62914.1 Thale cress mitochondrion 62.78 75.38
CDY34688 Canola cytosol 42.27 74.03
CDY34375 Canola mitochondrion 58.68 71.95
Bra027658.1-P Field mustard cytosol, mitochondrion 59.46 69.43
CDY25522 Canola mitochondrion, plastid 44.48 63.09
AT1G62680.2 Thale cress plastid 50.79 58.76
AT5G16640.1 Thale cress mitochondrion 45.9 57.74
AT1G62720.1 Thale cress mitochondrion 43.38 56.7
AT1G64580.1 Thale cress mitochondrion 45.43 55.07
AT3G16710.1 Thale cress mitochondrion 44.01 55.03
AT1G12300.1 Thale cress mitochondrion 54.42 54.16
AT5G41170.1 Thale cress mitochondrion 44.8 53.89
AT3G22470.1 Thale cress cytosol, mitochondrion 51.73 52.99
AT1G12620.1 Thale cress cytosol, mitochondrion 51.73 52.82
AT1G12700.2 Thale cress cytosol 50.47 51.78
AT1G12775.1 Thale cress cytosol, mitochondrion 52.05 51.24
AT1G06580.1 Thale cress mitochondrion 40.06 50.8
AT1G64583.1 Thale cress mitochondrion 38.8 48.05
AT4G26800.2 Thale cress mitochondrion, plastid 37.85 46.69
VIT_12s0028g02320.t01 Wine grape mitochondrion 33.6 44.65
VIT_14s0081g00270.t01 Wine grape plastid 37.07 40.52
VIT_14s0081g00110.t01 Wine grape cytosol 30.91 39.92
Solyc06g007280.2.1 Tomato cytosol 15.77 39.22
VIT_14s0081g00120.t01 Wine grape plastid 35.96 39.11
PGSC0003DMT400052977 Potato cytosol 23.5 38.3
Solyc06g005220.2.1 Tomato cytosol 24.13 37.68
KRH70370 Soybean cytosol 32.18 37.5
VIT_14s0081g00280.t01 Wine grape mitochondrion 37.54 37.25
AT1G64100.2 Thale cress cytosol 47.32 37.22
KRH42744 Soybean mitochondrion 35.65 36.99
PGSC0003DMT400025074 Potato cytosol 32.02 36.78
PGSC0003DMT400008757 Potato cytosol 28.86 36.75
KRH58843 Soybean nucleus 35.33 36.66
KRH49698 Soybean cytosol 32.81 36.49
Solyc06g007300.1.1 Tomato extracellular 33.91 36.32
VIT_14s0030g02280.t01 Wine grape plastid 31.7 35.83
PGSC0003DMT400025087 Potato endoplasmic reticulum 27.76 35.56
PGSC0003DMT400052971 Potato mitochondrion 32.97 35.24
KRH38755 Soybean mitochondrion 32.97 35.19
PGSC0003DMT400008759 Potato cytosol 17.67 35.11
KRH09256 Soybean mitochondrion 30.76 34.88
PGSC0003DMT400008760 Potato mitochondrion 32.18 34.81
Solyc06g007810.1.1 Tomato cytosol 14.67 34.7
PGSC0003DMT400025067 Potato cytosol 25.87 34.45
Solyc06g007740.1.1 Tomato cytosol 32.02 34.41
KRH75063 Soybean mitochondrion, plastid 32.65 34.27
KRH75045 Soybean mitochondrion 32.18 34.17
KRH75048 Soybean mitochondrion 32.49 33.88
PGSC0003DMT400056663 Potato plastid 31.07 33.5
PGSC0003DMT400056665 Potato mitochondrion 30.76 33.11
PGSC0003DMT400053185 Potato mitochondrion 30.6 32.88
VIT_14s0030g02260.t01 Wine grape cytosol 22.4 32.05
PGSC0003DMT400015293 Potato mitochondrion 30.76 31.97
PGSC0003DMT400015298 Potato mitochondrion 30.76 31.97
PGSC0003DMT400053556 Potato mitochondrion 23.03 31.81
Solyc04g080120.1.1 Tomato extracellular 30.13 31.21
Zm00001d018982_P001 Maize mitochondrion 16.88 30.57
PGSC0003DMT400053182 Potato cytosol 28.86 30.55
HORVU1Hr1G018190.2 Barley cytosol 13.56 30.18
Os10t0495100-01 Rice cytosol, mitochondrion 21.77 29.93
OQU82832 Sorghum cytosol 13.41 29.72
Os08t0248400-01 Rice mitochondrion 19.87 28.64
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 13.41 28.62
Os08t0107700-01 Rice cytosol, mitochondrion 16.72 28.34
TraesCS6A01G015000.1 Wheat mitochondrion 18.45 28.19
Os10t0499500-01 Rice mitochondrion 22.24 27.87
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 21.14 27.69
TraesCS1A01G067700.1 Wheat extracellular 14.67 27.6
Os10t0501700-00 Rice cytosol 19.72 27.53
TraesCS2B01G126900.1 Wheat cytosol 16.56 27.49
TraesCSU01G089700.1 Wheat mitochondrion 20.82 27.39
TraesCS6D01G083300.1 Wheat mitochondrion 19.24 27.35
HORVU1Hr1G011250.1 Barley cytosol 12.62 27.12
TraesCS1D01G058000.1 Wheat cytosol 17.35 27.09
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 13.88 27.08
HORVU6Hr1G017870.2 Barley mitochondrion 12.78 27.0
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 16.09 26.98
Os10t0497366-00 Rice mitochondrion 17.03 26.93
TraesCS6B01G127200.1 Wheat cytosol 14.51 26.74
TraesCSU01G090200.1 Wheat cytosol 18.61 26.7
OQU88594 Sorghum cytosol 21.92 26.63
TraesCS6D01G083400.1 Wheat mitochondrion 20.66 26.57
TraesCS6B01G127500.1 Wheat cytosol 20.5 26.53
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 10.57 26.48
EER95949 Sorghum mitochondrion 27.6 26.4
Os10t0497432-01 Rice mitochondrion 11.04 26.32
TraesCSU01G089800.1 Wheat mitochondrion 14.51 26.21
Os08t0107800-01 Rice mitochondrion 25.71 26.12
KXG34536 Sorghum mitochondrion 23.19 25.7
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 20.35 25.65
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 20.35 25.54
TraesCS6D01G083100.1 Wheat cytosol 19.72 25.51
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 19.09 25.16
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 20.03 24.85
TraesCS7D01G231400.1 Wheat cytosol, plastid 15.77 24.81
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 14.83 24.8
TraesCS6D01G076500.1 Wheat plastid 17.35 24.28
Os10t0495200-01 Rice mitochondrion 29.81 24.17
TraesCS1B01G072300.1 Wheat plastid 21.61 24.12
TraesCS1D01G068600.1 Wheat plastid 12.93 24.12
OQU82836 Sorghum cytosol 23.19 24.02
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 12.93 23.98
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 16.56 23.92
TraesCS6B01G021600.1 Wheat mitochondrion 26.81 23.74
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 26.5 23.53
TraesCS6D01G017800.1 Wheat cytosol 19.87 23.46
TraesCS1B01G073200.1 Wheat cytosol 11.2 23.43
KXG27690 Sorghum cytosol, plastid 26.97 23.39
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 26.34 23.36
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 17.67 23.33
TraesCS1B01G072700.1 Wheat cytosol 18.77 23.33
EES07882 Sorghum cytosol 28.39 23.17
HORVU6Hr1G014310.1 Barley mitochondrion 24.92 23.0
OQU82823 Sorghum cytosol 28.86 22.96
OQU82827 Sorghum cytosol 28.86 22.96
EES09203 Sorghum cytosol 28.86 22.93
TraesCS1B01G038200.1 Wheat mitochondrion 22.87 22.91
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 15.62 22.86
TraesCS1A01G073800.1 Wheat mitochondrion 11.99 22.82
Os10t0497300-01 Rice mitochondrion 28.55 22.8
TraesCS6D01G047700.1 Wheat mitochondrion 24.76 22.72
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 25.55 22.66
OQU82856 Sorghum cytosol 26.81 22.61
TraesCS1D01G057800.1 Wheat mitochondrion 12.93 22.59
TraesCS1B01G092600.1 Wheat plastid 18.3 22.44
OQU80148 Sorghum mitochondrion 25.71 22.42
KXG28799 Sorghum plastid 26.81 22.37
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 25.08 22.24
TraesCS1B01G086000.1 Wheat plastid 23.97 22.16
TraesCS7B01G469500.1 Wheat cytosol 19.4 21.89
TraesCS1B01G072400.1 Wheat cytosol 23.97 21.87
TraesCS6D01G290900.1 Wheat mitochondrion 25.24 21.83
TraesCS1D01G058400.1 Wheat cytosol 17.51 21.55
TraesCS1A01G054700.2 Wheat mitochondrion 27.6 21.55
Zm00001d007548_P001 Maize plastid 27.6 21.5
TraesCS6A01G083000.1 Wheat cytosol 15.46 21.49
Zm00001d007559_P001 Maize plastid 27.6 21.42
TraesCS1A01G054500.1 Wheat mitochondrion 26.34 21.41
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 22.4 21.39
Zm00001d009733_P001 Maize cytosol 26.81 21.38
TraesCS1D01G055300.1 Wheat cytosol 20.82 21.36
TraesCS1D01G056600.1 Wheat mitochondrion 6.78 21.29
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 21.45 21.28
OQU82831 Sorghum cytosol 20.5 21.21
TraesCS1B01G315500.1 Wheat mitochondrion 10.73 21.18
TraesCS1A01G067600.1 Wheat mitochondrion 26.97 21.03
Zm00001d007555_P001 Maize plastid 26.81 20.88
HORVU6Hr1G002890.6 Barley cytosol, plastid 26.18 20.88
KXG19780 Sorghum cytosol 19.4 20.81
HORVU0Hr1G035310.1 Barley cytosol 19.09 20.79
TraesCS6D01G017700.1 Wheat plastid 17.51 20.79
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 25.55 20.77
TraesCS1B01G085900.1 Wheat mitochondrion 26.66 20.76
Zm00001d007531_P001 Maize plastid 26.66 20.76
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 22.87 20.74
KXG35774 Sorghum cytosol, mitochondrion 15.46 20.72
TraesCS1A01G031600.1 Wheat cytosol 21.61 20.69
Os08t0110200-01 Rice mitochondrion 26.03 20.68
TraesCS1D01G068900.1 Wheat mitochondrion 26.5 20.66
TraesCS1A01G031700.1 Wheat plastid 24.13 20.65
HORVU6Hr1G076780.7 Barley mitochondrion 26.81 20.63
TraesCS1D01G068500.1 Wheat mitochondrion 26.34 20.57
TraesCS6B01G114300.1 Wheat cytosol 12.62 20.57
TraesCS1A01G074000.1 Wheat mitochondrion 9.15 20.49
Zm00001d007534_P001 Maize plastid 25.08 20.46
TraesCS1D01G069100.1 Wheat mitochondrion 20.66 20.37
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 22.4 20.37
TraesCS1A01G067400.1 Wheat mitochondrion 26.5 20.36
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 26.66 20.36
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 21.61 20.36
TraesCS1D01G068800.1 Wheat plastid 26.18 20.34
TraesCS1B01G085300.1 Wheat mitochondrion 25.39 20.33
TraesCS1B01G039700.1 Wheat cytosol 19.4 20.23
HORVU1Hr1G010970.1 Barley mitochondrion 26.34 20.22
TraesCS2A01G531000.1 Wheat golgi 21.61 20.18
TraesCS1D01G068400.1 Wheat mitochondrion 26.18 20.17
HORVU1Hr1G014040.1 Barley mitochondrion 26.5 20.17
Os04t0349600-01 Rice plastid 12.3 20.16
TraesCS1A01G066600.1 Wheat mitochondrion 8.36 20.15
TraesCS1A01G054800.1 Wheat cytosol 18.45 20.1
TraesCS1B01G038500.1 Wheat mitochondrion 24.92 20.0
TraesCS1A01G055800.1 Wheat mitochondrion 24.29 19.97
TraesCS1A01G067000.1 Wheat mitochondrion 22.56 19.97
TraesCS2A01G526200.1 Wheat golgi 21.45 19.97
TraesCS1B01G085400.1 Wheat cytosol 20.19 19.97
TraesCS2D01G532400.1 Wheat cytosol 19.24 19.97
TraesCS1B01G073100.1 Wheat cytosol 19.09 19.97
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 24.92 19.95
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 24.76 19.95
TraesCS1D01G056700.1 Wheat cytosol 19.09 19.93
TraesCS1B01G038400.1 Wheat cytosol 19.09 19.9
TraesCS1D01G076500.1 Wheat mitochondrion 20.82 19.88
TraesCS1D01G056200.1 Wheat mitochondrion 25.87 19.88
TraesCS2A01G530600.1 Wheat cytosol 23.97 19.87
TraesCS2D01G532500.1 Wheat plastid 21.29 19.85
TraesCS1B01G072900.2 Wheat mitochondrion 27.29 19.82
TraesCS1A01G057300.1 Wheat cytosol 22.4 19.78
HORVU0Hr1G031920.1 Barley plastid 26.81 19.77
TraesCS6A01G311600.1 Wheat mitochondrion 26.03 19.74
TraesCS2D01G532600.1 Wheat plastid 24.13 19.72
TraesCS1B01G075300.1 Wheat cytosol 18.45 19.6
TraesCS2B01G560700.1 Wheat plastid 23.82 19.59
TraesCS2D01G533000.1 Wheat cytosol, extracellular 20.35 19.58
HORVU1Hr1G004750.6 Barley plastid 24.61 19.55
HORVU1Hr1G011150.1 Barley cytosol, plastid 26.97 19.37
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 21.77 19.25
TraesCS1B01G039200.1 Wheat mitochondrion 23.66 19.13
HORVU1Hr1G011160.2 Barley cytosol, plastid 26.97 19.11
TraesCS1B01G071600.1 Wheat mitochondrion 25.55 19.1
HORVU1Hr1G010890.5 Barley cytosol 26.97 19.04
TraesCS1B01G039100.1 Wheat mitochondrion 23.5 19.03
TraesCS1D01G076900.1 Wheat plastid 19.72 19.03
TraesCS2D01G532300.1 Wheat plastid 23.34 19.02
TraesCS6A01G014600.1 Wheat cytosol 11.83 18.99
HORVU1Hr1G013810.1 Barley plastid 25.08 18.95
TraesCS1A01G055500.1 Wheat mitochondrion 6.47 18.89
HORVU1Hr1G014060.1 Barley plastid 26.5 18.88
TraesCS2D01G532100.1 Wheat mitochondrion 20.5 18.79
TraesCS6B01G129100.1 Wheat cytosol, plastid 8.52 18.75
TraesCS1B01G092500.1 Wheat mitochondrion 23.03 18.65
TraesCS1A01G073600.1 Wheat mitochondrion 11.51 18.62
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 22.4 18.54
OQU82834 Sorghum cytosol 27.76 18.28
HORVU1Hr1G011300.3 Barley plastid 26.5 18.26
TraesCS2A01G531100.1 Wheat cytosol 16.09 17.93
TraesCS1D01G058500.1 Wheat plastid 15.77 17.54
Zm00001d009735_P001 Maize cytosol 26.5 17.27
TraesCS2B01G559900.1 Wheat cytosol 14.67 17.16
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 6.15 17.11
TraesCS2B01G560300.1 Wheat cytosol 15.3 17.05
HORVU1Hr1G011400.44 Barley plastid 16.4 16.88
TraesCS1D01G076400.1 Wheat cytosol 9.46 16.53
OQU82833 Sorghum cytosol 11.67 16.52
TraesCS1D01G068700.1 Wheat cytosol 11.04 15.95
TraesCS1A01G073700.1 Wheat cytosol 9.62 15.84
Os04t0351333-00 Rice cytosol 21.92 15.81
TraesCS6B01G341800.2 Wheat cytosol 9.94 15.79
TraesCS1B01G084800.1 Wheat cytosol 11.51 15.73
TraesCS1D01G076700.1 Wheat cytosol 8.04 15.27
TraesCS1D01G033000.1 Wheat cytosol 9.62 15.1
TraesCS1B01G038300.1 Wheat plastid 12.93 15.02
TraesCS1A01G056000.1 Wheat cytosol 9.46 14.93
TraesCS1A01G067800.1 Wheat cytosol 8.68 14.71
TraesCS1B01G038600.1 Wheat cytosol 8.04 14.05
TraesCS1D01G067600.1 Wheat cytosol 7.41 12.88
TraesCS1D01G057700.1 Wheat cytosol 6.31 12.31
OQU88581 Sorghum cytosol 20.5 11.96
TraesCS1A01G055600.1 Wheat cytosol 5.84 11.38
TraesCS2D01G532200.1 Wheat cytosol 4.1 8.87
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1EntrezGene:842556ProteinID:AAD43616.1ProteinID:AEE33981.1EMBL:AK221654
ProteinID:ANM60557.1ArrayExpress:AT1G62590EnsemblPlantsGene:AT1G62590RefSeq:AT1G62590TAIR:AT1G62590RefSeq:AT1G62590-TAIR-G
EnsemblPlants:AT1G62590.1TAIR:AT1G62590.1EMBL:AY136399Unigene:At.36146GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0003824GO:GO:0004016GO:GO:0004518GO:GO:0004519GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0006139GO:GO:0006171GO:GO:0006397GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016787GO:GO:0080156GO:GO:0090305InterPro:IPR002885InterPro:IPR011990
RefSeq:NP_001322835.1RefSeq:NP_176447.1PFAM:PF12854PFAM:PF13041PFscan:PS51375PANTHER:PTHR44149
PANTHER:PTHR44149:SF3InterPro:Pentatricopeptide_repeatUniProt:Q9SXD8TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI00000A9E8F
SEG:seg:::::
Description
Pentatricopeptide repeat-containing protein At1g62590 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD8]
Coordinates
chr1:-:23176930..23179248
Molecular Weight (calculated)
70866.6 Da
IEP (calculated)
7.816
GRAVY (calculated)
-0.029
Length
634 amino acids
Sequence
(BLAST)
001: MRISISSVVS STTSRIVHRN LQGKGNPRIA PSSIDLCGMC YWGRAFSSGS GDYREILRNG LHDMKLDDAI GLFGGMVKSR PLPSIVEFNK LLSAIAKMKK
101: FDVVISLGEK MQRLEIVHGL YTYNILINCF CRRSQISLAL ALLGKMMKLG YEPSIVTLSS LLNGYCHGKR ISDAVALVDQ MVEMGYRPDT ITFTTLIHGL
201: FLHNKASEAV ALVDRMVQRG CQPNLVTYGV VVNGLCKRGD TDLALNLLNK MEAAKIEADV VIFNTIIDSL CKYRHVDDAL NLFKEMETKG IRPNVVTYSS
301: LISCLCSYGR WSDASQLLSD MIEKKINPNL VTFNALIDAF VKEGKFVEAE KLYDDMIKRS IDPDIFTYNS LVNGFCMHDR LDKAKQMFEF MVSKDCFPDV
401: VTYNTLIKGF CKSKRVEDGT ELFREMSHRG LVGDTVTYTT LIQGLFHDGD CDNAQKVFKQ MVSDGVPPDI MTYSILLDGL CNNGKLEKAL EVFDYMQKSE
501: IKLDIYIYTT MIEGMCKAGK VDDGWDLFCS LSLKGVKPNV VTYNTMISGL CSKRLLQEAY ALLKKMKEDG PLPNSGTYNT LIRAHLRDGD KAASAELIRE
601: MRSCRFVGDA STIGLVANML HDGRLDKSFL DMLS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.