Factsheet for Os10t0497300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0497366-00	Rice	mitochondrion	44.84	88.78
Os10t0497432-01	Rice	mitochondrion	29.72	88.72
Os10t0495200-01	Rice	mitochondrion	84.38	85.68
Os10t0495100-01	Rice	cytosol, mitochondrion	48.49	83.51
Os08t0248400-01	Rice	mitochondrion	41.06	74.09
Os10t0501700-00	Rice	cytosol	42.32	74.01
Os10t0499500-01	Rice	mitochondrion	46.98	73.72
Os08t0107800-01	Rice	mitochondrion	47.61	60.58
Os08t0110200-01	Rice	mitochondrion	59.95	59.65
TraesCS6A01G014600.1	Wheat	cytosol	29.35	58.99
Os08t0107700-01	Rice	cytosol, mitochondrion	27.71	58.82
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	51.89	57.62
HORVU1Hr1G018190.2	Barley	cytosol	20.65	57.54
TraesCS6D01G017800.1	Wheat	cytosol	38.92	57.54
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	51.64	57.34
OQU82836	Sorghum	cytosol	43.95	57.03
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	51.26	57.0
TraesCS6B01G021600.1	Wheat	mitochondrion	50.88	56.42
TraesCS6D01G017700.1	Wheat	plastid	37.91	56.37
Zm00001d018982_P001	Maize	mitochondrion	24.69	56.0
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	50.38	55.94
KXG27690	Sorghum	cytosol, plastid	51.26	55.68
OQU82831	Sorghum	cytosol	42.95	55.63
Zm00001d009733_P001	Maize	cytosol	55.54	55.47
EES07882	Sorghum	cytosol	52.64	53.8
OQU82833	Sorghum	cytosol	30.23	53.57
OQU80148	Sorghum	mitochondrion	48.99	53.51
TraesCS6A01G015000.1	Wheat	mitochondrion	27.96	53.49
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	17.0	53.36
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	21.79	53.23
OQU82827	Sorghum	cytosol	53.27	53.07
KXG19780	Sorghum	cytosol	39.42	52.96
TraesCSU01G089800.1	Wheat	mitochondrion	23.3	52.71
OQU82823	Sorghum	cytosol	52.9	52.7
TraesCSU01G089700.1	Wheat	mitochondrion	31.86	52.49
TraesCSU01G090200.1	Wheat	cytosol	29.22	52.49
HORVU6Hr1G014310.1	Barley	mitochondrion	44.08	50.95
TraesCS6D01G076500.1	Wheat	plastid	28.59	50.11
OQU82832	Sorghum	cytosol	18.01	50.0
EES09203	Sorghum	cytosol	50.13	49.87
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	23.8	49.87
HORVU6Hr1G002890.6	Barley	cytosol, plastid	49.5	49.43
TraesCS6A01G083000.1	Wheat	cytosol	27.58	48.03
TraesCS6B01G114300.1	Wheat	cytosol	23.43	47.81
TraesCS6D01G047700.1	Wheat	mitochondrion	41.06	47.18
Zm00001d009735_P001	Maize	cytosol	55.42	45.22
OQU82856	Sorghum	cytosol	40.18	42.42
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	40.3	41.78
OQU82834	Sorghum	cytosol	50.63	41.74
Os04t0351333-00	Rice	cytosol	39.17	35.38
KRH39054	Soybean	cytosol	21.66	34.61
KRH39074	Soybean	cytosol	21.66	34.61
KRH39112	Soybean	cytosol	21.66	34.61
KRH39057	Soybean	cytosol	21.41	34.21
KRH40513	Soybean	plastid	14.99	33.9
KRH39004	Soybean	cytosol	21.16	33.8
Solyc06g007280.2.1	Tomato	cytosol	10.83	33.73
VIT_12s0028g02320.t01	Wine grape	mitochondrion	20.15	33.54
KRH39072	Soybean	cytosol	20.91	33.47
Bra027636.1-P	Field mustard	cytosol	13.48	33.02
Os04t0349600-01	Rice	plastid	15.99	32.82
Bra036649.1-P	Field mustard	cytosol	15.99	32.48
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	20.65	32.48
KRH48615	Soybean	mitochondrion	22.17	32.29
AT1G63330.2	Thale cress	cytosol	22.67	32.2
VIT_14s0081g00110.t01	Wine grape	cytosol	19.9	32.18
KRH39066	Soybean	cytosol	22.29	31.89
KRH08636	Soybean	cytosol	20.91	31.8
Bra027029.1-P	Field mustard	mitochondrion	9.7	31.69
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	20.65	31.24
KRH39050	Soybean	mitochondrion	20.78	31.02
Solyc06g005220.2.1	Tomato	cytosol	15.62	30.54
KRH31646	Soybean	cytosol	19.9	30.5
Bra026884.1-P	Field mustard	cytosol	17.63	30.5
VIT_14s0081g00120.t01	Wine grape	plastid	22.29	30.36
Solyc06g007810.1.1	Tomato	cytosol	10.2	30.22
KRH17148	Soybean	mitochondrion	20.65	30.09
KRH08628	Soybean	plastid	20.91	30.07
KRH08277	Soybean	plastid	21.41	29.98
Bra026882.1-P	Field mustard	cytosol	20.15	29.96
Bra006187.1-P	Field mustard	plastid	10.96	29.9
KRH08671	Soybean	cytosol, mitochondrion	20.78	29.84
VIT_14s0081g00270.t01	Wine grape	plastid	21.79	29.83
AT1G62930.1	Thale cress	plastid	23.43	29.57
KRH08639	Soybean	mitochondrion, plastid	21.03	29.56
AT1G63150.1	Thale cress	mitochondrion	23.3	29.41
AT1G63130.1	Thale cress	mitochondrion	23.3	29.37
KRH09084	Soybean	plastid	18.89	29.35
Bra036651.1-P	Field mustard	mitochondrion	19.77	29.35
KRH09154	Soybean	mitochondrion	20.53	29.32
PGSC0003DMT400052977	Potato	cytosol	14.36	29.31
KRH41817	Soybean	mitochondrion	20.4	29.19
AT1G62914.1	Thale cress	mitochondrion	19.4	29.17
AT1G62670.1	Thale cress	mitochondrion	23.05	29.05
AT1G12620.1	Thale cress	cytosol, mitochondrion	22.67	28.99
AT1G62910.1	Thale cress	mitochondrion	23.05	28.96
AT1G63400.1	Thale cress	cytosol, plastid	21.03	28.94
KRH25652	Soybean	cytosol, golgi	19.65	28.89
PGSC0003DMT400008759	Potato	cytosol	11.59	28.84
AT1G63080.3	Thale cress	mitochondrion	22.29	28.83
KRH08625	Soybean	plastid	20.91	28.82
AT1G63070.1	Thale cress	mitochondrion	21.41	28.81
KRH40400	Soybean	plastid	20.91	28.77
KRH08607	Soybean	cytosol	20.28	28.7
AT1G62590.1	Thale cress	mitochondrion	22.8	28.55
AT3G22470.1	Thale cress	cytosol, mitochondrion	22.17	28.43
AT5G16640.1	Thale cress	mitochondrion	18.01	28.37
PGSC0003DMT400025074	Potato	cytosol	19.65	28.26
PGSC0003DMT400008757	Potato	cytosol	17.63	28.11
Bra026958.1-P	Field mustard	mitochondrion	22.54	28.1
AT1G12300.1	Thale cress	mitochondrion	22.42	27.94
Bra025516.1-P	Field mustard	cytosol, mitochondrion	16.75	27.88
Bra026971.1-P	Field mustard	mitochondrion	22.04	27.82
AT3G16710.1	Thale cress	mitochondrion	17.76	27.81
Solyc06g007740.1.1	Tomato	cytosol	20.65	27.8
VIT_14s0081g00280.t01	Wine grape	mitochondrion	22.29	27.7
Bra028267.1-P	Field mustard	mitochondrion	21.79	27.64
VIT_14s0030g02280.t01	Wine grape	plastid	19.52	27.63
Bra027658.1-P	Field mustard	cytosol, mitochondrion	18.89	27.62
Bra021192.1-P	Field mustard	plastid	17.51	27.58
KRH09121	Soybean	mitochondrion	18.51	27.53
Bra026836.1-P	Field mustard	cytosol, mitochondrion	17.0	27.49
Bra031731.1-P	Field mustard	mitochondrion	17.51	27.36
AT1G62720.1	Thale cress	mitochondrion	16.62	27.22
Bra027026.1-P	Field mustard	mitochondrion	17.88	27.15
Bra026954.1-P	Field mustard	mitochondrion	22.17	27.08
PGSC0003DMT400025087	Potato	endoplasmic reticulum	16.88	27.07
Solyc06g007300.1.1	Tomato	extracellular	20.15	27.03
AT1G64580.1	Thale cress	mitochondrion	17.63	26.77
KRH09082	Soybean	cytosol	13.73	26.72
AT1G12700.2	Thale cress	cytosol	20.78	26.7
PGSC0003DMT400025067	Potato	cytosol	15.99	26.68
AT1G62680.2	Thale cress	plastid	18.39	26.64
AT1G12775.1	Thale cress	cytosol, mitochondrion	21.54	26.55
PGSC0003DMT400056663	Potato	plastid	19.65	26.53
Bra016762.1-P	Field mustard	mitochondrion	20.28	26.52
PGSC0003DMT400015293	Potato	mitochondrion	20.28	26.39
PGSC0003DMT400015298	Potato	mitochondrion	20.28	26.39
AT1G64583.1	Thale cress	mitochondrion	16.88	26.17
PGSC0003DMT400008760	Potato	mitochondrion	19.27	26.11
PGSC0003DMT400053185	Potato	mitochondrion	19.4	26.1
CDX68679	Canola	cytosol	3.78	26.09
AT1G06580.1	Thale cress	mitochondrion	16.37	26.0
Solyc04g080120.1.1	Tomato	extracellular	20.03	25.98
AT5G41170.1	Thale cress	mitochondrion	17.13	25.81
Bra026957.1-P	Field mustard	mitochondrion	19.52	25.7
PGSC0003DMT400056665	Potato	mitochondrion	19.02	25.64
KRH09097	Soybean	plastid	18.77	25.56
PGSC0003DMT400052971	Potato	mitochondrion	19.02	25.46
KRH08599	Soybean	cytosol, plastid	20.91	24.81
KRH09095	Soybean	plastid	18.26	24.79
PGSC0003DMT400053182	Potato	cytosol	18.64	24.71
VIT_14s0030g02260.t01	Wine grape	cytosol	13.35	23.93
AT4G26800.2	Thale cress	mitochondrion, plastid	15.37	23.74
Bra027726.1-P	Field mustard	mitochondrion	13.85	23.35
PGSC0003DMT400053556	Potato	mitochondrion	13.48	23.31
AT1G64100.2	Thale cress	cytosol	23.3	22.95
Bra026401.1-P	Field mustard	plastid	15.24	22.62
KRH09085	Soybean	mitochondrion	19.4	21.88
Bra027656.1-P	Field mustard	cytosol	24.56	20.72
KRH12873	Soybean	cytosol	16.75	19.11
KRH39064	Soybean	cytosol	22.67	18.58
Bra016758.1-P	Field mustard	plastid	21.03	14.41

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EMBL:AK064770	ProteinID:BAD08215.1	ProteinID:BAF26872.1	ProteinID:BAT11490.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987
GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885
InterPro:IPR011990	EnsemblPlantsGene:Os10g0497300	EnsemblPlants:Os10t0497300-01	PFAM:PF01535	PFAM:PF12854	PFAM:PF13041
PFscan:PS51375	PANTHER:PTHR44149	PANTHER:PTHR44149:SF3	InterPro:Pentatricopeptide_repeat	UniProt:Q76C22	SUPFAM:SSF48452
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0000236DA2	SEG:seg	:	:

Description

a 794-aa protein with 17 PPR motifs, pentatricopeptide repeat protein 6, pentatricopeptide repeat protein 794, pentatricopeptide repeat motif containing gene 5, PPR motif-containing gene 5Pentatricopeptide repeat domain containing protein. (Os10t0497300-01)

Coordinates

chr10:+:18935690..18942571

Molecular Weight (calculated)

87803.8 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.036

Length

794 amino acids

Sequence
(BLAST)

001: MARRAASRVR AGAVGALRSE GSTQGRGGRT GGSGAEDARH VFDELLRRGR GASIYGLNCA LADVARHSPA AAVSRYNRMA RAGADEVTPN LCTYGILIGS
101: CCCAGRLDLG FAALGNVIKK GFRVDAIAFT PLLKGLCADK RTSDAMDIVL RRMTQLGCIP NVFSYNILLK GLCDENRSQE ALELLQMMPD DGGDCPPDVV
201: SYTTVINGFF KEGDLDKAYG TYHEMLDRGI LPNVVTYSSI IAALCKAQAM DKAMEVLTSM VKNGVMPNCR TYNSIVHGYC SSGQPKEAIG FLKKMHSDGV
301: EPDVVTYNSL MDYLCKNGRC TEARKMFDSM TKRGLKPEIT TYGTLLQGYA TKGALVEMHG LLDLMVRNGI HPNHYVFSIL ICAYAKQGKV DQAMLVFSKM
401: RQQGLNPDTV TYGTVIGILC KSGRVEDAMR YFEQMIDERL SPGNIVYNSL IHSLCIFDKW DKAKELILEM LDRGICLDTI FFNSIIDSHC KEGRVIESEK
501: LFDLMVRIGV KPDIITYSTL IDGYCLAGKM DEATKLLASM VSVGMKPDCV TYNTLINGYC KISRMEDALV LFREMESSGV SPDIITYNII LQGLFQTRRT
601: AAAKELYVGI TESGTQLELS TYNIILHGLC KNNLTDEALR MFQNLCLTDL QLETRTFNIM IGALLKVGRN DEAKDLFAAL SANGLVPDVR TYSLMAENLI
701: EQGLLEELDD LFLSMEENGC TANSRMLNSI VRKLLQRGDI TRAGTYLFMI DEKHFSLEAS TASLFLDLLS GGKYQEYHRF LPEKYKSFIE SLSC

Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)

001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

Arabidopsis Description

RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.