CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	EER91265	AT4G26630.1	25387881
AT1G62670.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82831	Sorghum	cytosol	95.54	69.82
KXG19780	Sorghum	cytosol	70.09	53.13
OQU82836	Sorghum	cytosol	69.64	50.98
OQU80148	Sorghum	mitochondrion	74.11	45.67
KXG27690	Sorghum	cytosol, plastid	72.99	44.73
EES07882	Sorghum	cytosol	72.54	41.83
OQU82827	Sorghum	cytosol	72.1	40.53
OQU82823	Sorghum	cytosol	71.88	40.4
EES09203	Sorghum	cytosol	69.2	38.85
Os10t0501700-00	Rice	cytosol	33.71	33.26
OQU82834	Sorghum	cytosol	69.64	32.4
KXG35774	Sorghum	cytosol, mitochondrion	34.15	32.35
Os10t0495200-01	Rice	mitochondrion	54.46	31.2
Os08t0110200-01	Rice	mitochondrion	54.24	30.45
Os10t0497300-01	Rice	mitochondrion	53.57	30.23
Solyc06g007810.1.1	Tomato	cytosol	15.4	25.75
CDX68679	Canola	cytosol	6.25	24.35
OQU82856	Sorghum	cytosol	40.4	24.07
KXG28799	Sorghum	plastid	40.62	23.95
PGSC0003DMT400008759	Potato	cytosol	14.96	21.0
Os10t0497366-00	Rice	mitochondrion	18.53	20.7
Os08t0107800-01	Rice	mitochondrion	28.57	20.51
Bra006187.1-P	Field mustard	plastid	13.17	20.27
KXG34536	Sorghum	mitochondrion	23.21	18.18
VIT_14s0030g02260.t01	Wine grape	cytosol	17.63	17.83
PGSC0003DMT400052977	Potato	cytosol	14.73	16.97
EER95949	Sorghum	mitochondrion	24.55	16.59
Bra027029.1-P	Field mustard	mitochondrion	8.93	16.46
VIT_14s0081g00110.t01	Wine grape	cytosol	17.86	16.29
OQU88594	Sorghum	cytosol	18.75	16.09
KRH39057	Soybean	cytosol	17.63	15.9
Bra027636.1-P	Field mustard	cytosol	11.38	15.74
KRH09082	Soybean	cytosol	14.06	15.44
OQU88581	Sorghum	cytosol	37.28	15.36
KRH39072	Soybean	cytosol	16.96	15.32
KRH39054	Soybean	cytosol	16.96	15.29
KRH39004	Soybean	cytosol	16.74	15.09
Bra026884.1-P	Field mustard	cytosol	15.4	15.03
KRH39074	Soybean	cytosol	16.52	14.89
Solyc06g005220.2.1	Tomato	cytosol	12.95	14.29
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	16.07	14.26
VIT_14s0081g00120.t01	Wine grape	plastid	18.53	14.24
KRH31646	Soybean	cytosol	16.29	14.09
KRH39112	Soybean	cytosol	15.62	14.08
KRH08636	Soybean	cytosol	16.07	13.79
Os10t0495100-01	Rice	cytosol, mitochondrion	14.06	13.67
Bra026836.1-P	Field mustard	cytosol, mitochondrion	14.96	13.65
Os10t0499500-01	Rice	mitochondrion	15.4	13.64
KRH39066	Soybean	cytosol	16.74	13.51
KRH25652	Soybean	cytosol, golgi	16.07	13.33
VIT_14s0081g00270.t01	Wine grape	plastid	17.19	13.28
AT1G63330.2	Thale cress	cytosol	16.52	13.24
KRH48615	Soybean	mitochondrion	16.07	13.21
PGSC0003DMT400008757	Potato	cytosol	14.51	13.05
Bra036649.1-P	Field mustard	cytosol	11.38	13.04
KRH08628	Soybean	plastid	16.07	13.04
KRH08607	Soybean	cytosol	16.29	13.01
Bra025516.1-P	Field mustard	cytosol, mitochondrion	13.84	13.0
KRH08625	Soybean	plastid	16.52	12.85
VIT_12s0028g02320.t01	Wine grape	mitochondrion	13.62	12.79
KRH39050	Soybean	mitochondrion	15.18	12.78
KRH08639	Soybean	mitochondrion, plastid	16.07	12.74
Bra026882.1-P	Field mustard	cytosol	15.18	12.73
KRH08277	Soybean	plastid	16.07	12.7
KRH17148	Soybean	mitochondrion	15.4	12.66
KRH08671	Soybean	cytosol, mitochondrion	15.62	12.66
KRH09084	Soybean	plastid	14.29	12.52
KRH40400	Soybean	plastid	16.07	12.48
KRH41817	Soybean	mitochondrion	15.4	12.43
KRH09154	Soybean	mitochondrion	15.18	12.23
VIT_14s0081g00280.t01	Wine grape	mitochondrion	17.41	12.21
Bra031731.1-P	Field mustard	mitochondrion	13.84	12.2
AT5G16640.1	Thale cress	mitochondrion	13.62	12.1
AT3G16710.1	Thale cress	mitochondrion	13.62	12.03
Bra027658.1-P	Field mustard	cytosol, mitochondrion	14.51	11.97
PGSC0003DMT400008760	Potato	mitochondrion	15.62	11.95
Solyc06g007740.1.1	Tomato	cytosol	15.62	11.86
AT1G62680.2	Thale cress	plastid	14.51	11.86
KRH09121	Soybean	mitochondrion	14.06	11.8
AT1G63070.1	Thale cress	mitochondrion	15.4	11.69
AT1G62590.1	Thale cress	mitochondrion	16.52	11.67
KRH08599	Soybean	cytosol, plastid	17.41	11.66
Solyc06g007300.1.1	Tomato	extracellular	15.4	11.66
PGSC0003DMT400015293	Potato	mitochondrion	15.85	11.64
PGSC0003DMT400015298	Potato	mitochondrion	15.85	11.64
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	13.62	11.62
Solyc04g080120.1.1	Tomato	extracellular	15.85	11.6
PGSC0003DMT400025074	Potato	cytosol	14.29	11.59
AT5G41170.1	Thale cress	mitochondrion	13.62	11.57
PGSC0003DMT400025087	Potato	endoplasmic reticulum	12.72	11.52
Bra027026.1-P	Field mustard	mitochondrion	13.39	11.47
AT1G62670.1	Thale cress	mitochondrion	16.07	11.43
Bra036651.1-P	Field mustard	mitochondrion	13.62	11.4
Bra026954.1-P	Field mustard	mitochondrion	16.52	11.38
PGSC0003DMT400056665	Potato	mitochondrion	14.96	11.38
PGSC0003DMT400053182	Potato	cytosol	15.18	11.35
KRH09095	Soybean	plastid	14.73	11.28
PGSC0003DMT400053185	Potato	mitochondrion	14.73	11.19
KRH09097	Soybean	plastid	14.51	11.15
Bra026958.1-P	Field mustard	mitochondrion	15.85	11.15
PGSC0003DMT400025067	Potato	cytosol	11.83	11.13
AT1G62720.1	Thale cress	mitochondrion	12.05	11.13
PGSC0003DMT400052971	Potato	mitochondrion	14.73	11.13
AT1G63150.1	Thale cress	mitochondrion	15.62	11.13
AT1G63130.1	Thale cress	mitochondrion	15.62	11.11
Bra021192.1-P	Field mustard	plastid	12.5	11.11
AT1G62930.1	Thale cress	plastid	15.4	10.97
AT1G12620.1	Thale cress	cytosol, mitochondrion	15.18	10.95
Bra026957.1-P	Field mustard	mitochondrion	14.73	10.95
Bra027726.1-P	Field mustard	mitochondrion	11.38	10.83
Bra026971.1-P	Field mustard	mitochondrion	15.18	10.81
AT1G63080.3	Thale cress	mitochondrion	14.73	10.75
PGSC0003DMT400056663	Potato	plastid	14.06	10.71
Bra016762.1-P	Field mustard	mitochondrion	14.51	10.71
AT1G12300.1	Thale cress	mitochondrion	15.18	10.68
AT3G22470.1	Thale cress	cytosol, mitochondrion	14.73	10.66
AT1G12700.2	Thale cress	cytosol	14.51	10.52
AT1G64580.1	Thale cress	mitochondrion	12.28	10.52
AT1G62910.1	Thale cress	mitochondrion	14.73	10.44
AT1G64583.1	Thale cress	mitochondrion	11.83	10.35
AT1G12775.1	Thale cress	cytosol, mitochondrion	14.73	10.25
KRH40513	Soybean	plastid	7.81	9.97
AT1G63400.1	Thale cress	cytosol, plastid	12.72	9.88
Bra028267.1-P	Field mustard	mitochondrion	13.62	9.74
Bra027656.1-P	Field mustard	cytosol	20.31	9.67
KRH09085	Soybean	mitochondrion	15.18	9.66
VIT_14s0030g02280.t01	Wine grape	plastid	12.05	9.63
AT1G06580.1	Thale cress	mitochondrion	10.71	9.6
AT1G64100.2	Thale cress	cytosol	16.96	9.43
Bra026401.1-P	Field mustard	plastid	10.49	8.79
KRH39064	Soybean	cytosol	18.53	8.57
AT4G26800.2	Thale cress	mitochondrion, plastid	9.82	8.56
AT1G62914.1	Thale cress	mitochondrion	10.04	8.52
PGSC0003DMT400053556	Potato	mitochondrion	8.71	8.5
Os08t0248400-01	Rice	mitochondrion	8.26	8.41
KRH12873	Soybean	cytosol	12.5	8.05
Solyc06g007280.2.1	Tomato	cytosol	4.24	7.45
Bra016758.1-P	Field mustard	plastid	14.73	5.69
Os10t0497432-01	Rice	mitochondrion	0.67	1.13
Os08t0107700-01	Rice	cytosol, mitochondrion	0.89	1.07
OQU82832	Sorghum	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:OQU82833	EnsemblPlantsGene:SORBI_3005G027760	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF302
PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	ProteinID:OQU82833	ProteinID:OQU82833.1	SEG:seg
SUPFAM:SSF81901	TIGRFAMs:TIGR00756	UniParc:UPI000B8B9C0E	UniProt:A0A1Z5RGD3	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr5:+:2455167..2459380

Molecular Weight (calculated)

50157.5 Da

IEP (calculated)

6.137

GRAVY (calculated)

-0.029

Length

448 amino acids

Sequence
(BLAST)

001: MVENGLSPDH HIFNIFFSAY AKCGMIDKAM DIFNKMRQHG LSPNVVNYGA LIDALCKLGR VDDAEVKFNQ MINEGVTPNI VVFNSLVYGL CTVDKWERAE
101: ELVYEMLDQG ICPNAVFFNT LICNLCNVGR VMEGRRLIDL MEHVGVRPDA FSYTPLISGY CLAGRTDEAE KVFDGMVSIG LSPTEVTYNT LLHGYCSASR
201: IDDAYCLFRE MLRKGVTPGV VTYNTILHGL FQTKRFSEAK ELYLNMINSG TKCDIYTYNI ILNGLCKSNC VDEAFKMFQS LCSKGLQLNI ITFTIMIGAL
301: LKGGRKEDAM DLFAAIPANG LVPNVVTYRL VAENLIEEGS LEEFDSLFSA MEKNGTAPNS QMLNALVRRL LHRGDISRAG AYLSKLDERN FSVEASTTSL
401: LISIFTSDEY QHHAKSLPEK YHFLNEANRI VSYSQAKNRR FVGNIPHD

Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)

001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS

Arabidopsis Description

ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.