Factsheet for PGSC0003DMT400053556

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	PGSC0003DMT400037344	AT4G26630.1	25387881
AT1G62670.1	PGSC0003DMT400057390	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025074	Potato	cytosol	68.41	56.88
PGSC0003DMT400052971	Potato	mitochondrion	72.98	56.49
PGSC0003DMT400025087	Potato	endoplasmic reticulum	59.7	55.35
PGSC0003DMT400008760	Potato	mitochondrion	70.37	55.12
PGSC0003DMT400056665	Potato	mitochondrion	70.37	54.84
PGSC0003DMT400008757	Potato	cytosol	59.48	54.82
PGSC0003DMT400053185	Potato	mitochondrion	68.85	53.56
PGSC0003DMT400008759	Potato	cytosol	36.38	52.35
PGSC0003DMT400056663	Potato	plastid	66.88	52.21
PGSC0003DMT400025067	Potato	cytosol	54.03	52.1
PGSC0003DMT400052977	Potato	cytosol	43.79	51.67
PGSC0003DMT400053182	Potato	cytosol	66.01	50.58
PGSC0003DMT400015293	Potato	mitochondrion	50.33	37.87
PGSC0003DMT400015298	Potato	mitochondrion	50.33	37.87
VIT_12s0028g02320.t01	Wine grape	mitochondrion	36.82	35.43
Bra027029.1-P	Field mustard	mitochondrion	18.74	35.39
CDY46909	Canola	mitochondrion	21.13	33.22
CDY09968	Canola	cytosol	19.83	30.95
CDY16031	Canola	cytosol	20.7	30.55
CDY06217	Canola	cytosol	19.39	30.38
VIT_14s0081g00270.t01	Wine grape	plastid	38.13	30.17
VIT_14s0081g00120.t01	Wine grape	plastid	37.69	29.67
Bra027636.1-P	Field mustard	cytosol	20.91	29.63
CDY39810	Canola	cytosol	24.84	29.16
VIT_14s0030g02280.t01	Wine grape	plastid	35.51	29.06
CDY03257	Canola	cytosol	24.4	28.64
Bra036649.1-P	Field mustard	cytosol	24.18	28.39
CDY16002	Canola	cytosol	19.17	28.3
CDY16026	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	33.77	28.23
VIT_14s0081g00110.t01	Wine grape	cytosol	30.07	28.11
CDY66358	Canola	mitochondrion	23.75	27.95
AT1G62720.1	Thale cress	mitochondrion	29.41	27.84
CDY26588	Canola	extracellular	19.61	27.78
CDX67634	Canola	cytosol	25.49	27.66
CDY34870	Canola	mitochondrion	17.21	27.53
VIT_14s0081g00280.t01	Wine grape	mitochondrion	37.91	27.23
AT5G16640.1	Thale cress	mitochondrion	29.85	27.18
Bra021192.1-P	Field mustard	plastid	29.85	27.18
CDY34969	Canola	mitochondrion	29.85	27.08
AT1G06580.1	Thale cress	mitochondrion	29.41	27.0
AT1G62914.1	Thale cress	mitochondrion	30.94	26.89
CDY25492	Canola	mitochondrion	28.76	26.88
CDY65983	Canola	mitochondrion	24.4	26.54
Bra026958.1-P	Field mustard	mitochondrion	36.82	26.53
Bra026882.1-P	Field mustard	cytosol	30.72	26.4
CDY00489	Canola	mitochondrion	33.55	26.28
Bra006187.1-P	Field mustard	plastid	16.56	26.12
KRH70370	Soybean	cytosol	30.94	26.1
AT3G16710.1	Thale cress	mitochondrion	28.76	26.04
CDY33797	Canola	mitochondrion	28.98	25.98
CDY31271	Canola	mitochondrion	27.45	25.93
Bra028267.1-P	Field mustard	mitochondrion	35.29	25.88
Bra025516.1-P	Field mustard	cytosol, mitochondrion	26.8	25.79
CDY16110	Canola	extracellular	22.88	25.61
AT3G22470.1	Thale cress	cytosol, mitochondrion	34.42	25.52
CDY48949	Canola	mitochondrion	26.58	25.36
CDX69436	Canola	plastid	27.45	25.3
CDY16032	Canola	mitochondrion	22.44	25.25
Bra031731.1-P	Field mustard	mitochondrion	27.89	25.2
AT1G62680.2	Thale cress	plastid	30.07	25.18
CDY31272	Canola	mitochondrion	31.15	25.18
CDY46394	Canola	mitochondrion	26.36	25.16
AT1G63400.1	Thale cress	cytosol, plastid	31.59	25.13
AT1G12700.2	Thale cress	cytosol	33.77	25.08
CDY51169	Canola	cytosol	23.09	25.06
Bra026836.1-P	Field mustard	cytosol, mitochondrion	26.8	25.05
Bra027026.1-P	Field mustard	mitochondrion	28.54	25.05
AT1G64583.1	Thale cress	mitochondrion	27.89	25.0
AT1G12300.1	Thale cress	mitochondrion	34.64	24.96
AT1G63150.1	Thale cress	mitochondrion	34.2	24.96
KRH49698	Soybean	cytosol	30.94	24.91
AT1G63330.2	Thale cress	cytosol	30.28	24.87
Bra016762.1-P	Field mustard	mitochondrion	32.68	24.71
CDY68929	Canola	mitochondrion	32.68	24.71
AT4G26800.2	Thale cress	mitochondrion, plastid	27.67	24.71
Bra036651.1-P	Field mustard	mitochondrion	28.76	24.67
Bra026971.1-P	Field mustard	mitochondrion	33.77	24.64
AT1G63130.1	Thale cress	mitochondrion	33.77	24.6
Bra026957.1-P	Field mustard	mitochondrion	32.24	24.54
CDY08386	Canola	cytosol	23.75	24.49
KRH58843	Soybean	nucleus	32.46	24.39
CDY46912	Canola	mitochondrion	26.14	24.29
AT5G41170.1	Thale cress	mitochondrion	27.89	24.29
AT1G62670.1	Thale cress	mitochondrion	33.33	24.29
CDY26565	Canola	mitochondrion	30.07	24.25
AT1G62930.1	Thale cress	plastid	33.12	24.17
AT1G12620.1	Thale cress	cytosol, mitochondrion	32.68	24.15
CDY49646	Canola	mitochondrion	26.36	24.15
CDY26593	Canola	cytosol	32.03	24.14
KRH38755	Soybean	mitochondrion	31.15	24.07
KRH42744	Soybean	mitochondrion	32.03	24.06
CDY47835	Canola	mitochondrion	22.88	24.03
Bra026884.1-P	Field mustard	cytosol	23.97	23.97
KRH75048	Soybean	mitochondrion	31.59	23.85
Bra026954.1-P	Field mustard	mitochondrion	33.77	23.85
TraesCS2B01G126900.1	Wheat	cytosol	19.83	23.82
AT1G12775.1	Thale cress	cytosol, mitochondrion	33.12	23.6
AT1G62910.1	Thale cress	mitochondrion	32.46	23.58
Bra027726.1-P	Field mustard	mitochondrion	24.18	23.57
AT1G64580.1	Thale cress	mitochondrion	26.8	23.52
CDY33753	Canola	mitochondrion	22.66	23.42
AT1G63080.3	Thale cress	mitochondrion	31.15	23.29
KRH75045	Soybean	mitochondrion	30.28	23.28
VIT_14s0030g02260.t01	Wine grape	cytosol	22.44	23.25
KRH09256	Soybean	mitochondrion	28.1	23.08
AT1G62590.1	Thale cress	mitochondrion	31.81	23.03
CDY16003	Canola	cytosol, plastid	19.61	23.02
CDY35831	Canola	mitochondrion	25.71	22.91
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.81	22.9
CDY29251	Canola	mitochondrion	25.27	22.88
Zm00001d018982_P001	Maize	mitochondrion	17.43	22.86
TraesCS1A01G067700.1	Wheat	extracellular	16.78	22.85
KRH75063	Soybean	mitochondrion, plastid	30.07	22.85
AT1G63070.1	Thale cress	mitochondrion	29.19	22.71
CDY28348	Canola	mitochondrion, plastid	29.41	22.58
TraesCS6B01G127200.1	Wheat	cytosol	16.78	22.38
CDY26607	Canola	cytosol	22.22	22.32
CDX71969	Canola	cytosol	18.95	21.97
CDY25519	Canola	mitochondrion, plastid	30.5	21.91
HORVU1Hr1G018190.2	Barley	cytosol	13.51	21.75
HORVU1Hr1G011250.1	Barley	cytosol	13.94	21.69
Bra026401.1-P	Field mustard	plastid	25.27	21.68
CDX89301	Canola	plastid	25.27	21.68
CDY34375	Canola	mitochondrion	24.4	21.66
Os10t0495100-01	Rice	cytosol, mitochondrion	21.35	21.26
CDX68680	Canola	mitochondrion	21.35	21.21
TraesCS6A01G015000.1	Wheat	mitochondrion	18.95	20.96
TraesCS6B01G127500.1	Wheat	cytosol	22.0	20.61
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	19.61	20.5
CDY34688	Canola	cytosol	16.12	20.44
TraesCS6D01G083300.1	Wheat	mitochondrion	19.83	20.4
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	16.78	20.37
Bra027658.1-P	Field mustard	cytosol, mitochondrion	23.97	20.26
Os08t0248400-01	Rice	mitochondrion	19.39	20.23
TraesCS1D01G058000.1	Wheat	cytosol	17.86	20.2
TraesCSU01G090200.1	Wheat	cytosol	19.39	20.14
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	14.16	20.0
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	21.79	19.88
TraesCSU01G089700.1	Wheat	mitochondrion	20.7	19.71
CDY25522	Canola	mitochondrion, plastid	19.17	19.69
TraesCSU01G089800.1	Wheat	mitochondrion	15.03	19.66
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	20.7	19.63
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	20.48	19.54
Os10t0497366-00	Rice	mitochondrion	16.99	19.45
TraesCS6D01G083400.1	Wheat	mitochondrion	20.7	19.27
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	21.13	19.21
TraesCS6D01G083100.1	Wheat	cytosol	20.48	19.18
Os10t0501700-00	Rice	cytosol	18.95	19.16
TraesCS7D01G231400.1	Wheat	cytosol, plastid	16.78	19.11
HORVU6Hr1G017870.2	Barley	mitochondrion	12.2	18.67
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	20.7	18.59
TraesCS6D01G076500.1	Wheat	plastid	18.3	18.54
CDY66357	Canola	cytosol	15.25	18.47
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	17.21	18.24
KXG34536	Sorghum	mitochondrion	22.66	18.18
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	14.81	17.94
TraesCS1D01G068600.1	Wheat	plastid	13.29	17.94
OQU88594	Sorghum	cytosol	20.26	17.82
EER95949	Sorghum	mitochondrion	25.71	17.8
TraesCS7B01G469500.1	Wheat	cytosol	21.35	17.44
TraesCS1B01G092600.1	Wheat	plastid	19.61	17.41
TraesCS1B01G072300.1	Wheat	plastid	21.35	17.25
TraesCS1B01G038200.1	Wheat	mitochondrion	23.75	17.22
CDY34370	Canola	cytosol	30.28	16.93
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	12.42	16.67
TraesCS1B01G072700.1	Wheat	cytosol	18.3	16.47
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	17.21	16.46
AT1G64100.2	Thale cress	cytosol	28.54	16.25
Os10t0499500-01	Rice	mitochondrion	17.86	16.21
TraesCS1B01G315500.1	Wheat	mitochondrion	11.33	16.2
TraesCS1B01G086000.1	Wheat	plastid	24.18	16.18
Os04t0349600-01	Rice	plastid	13.51	16.02
TraesCS6B01G021600.1	Wheat	mitochondrion	24.84	15.92
CDX81633	Canola	extracellular, golgi, plasma membrane	31.37	15.84
TraesCS6D01G017800.1	Wheat	cytosol	18.52	15.83
TraesCS1A01G031700.1	Wheat	plastid	25.49	15.79
OQU82832	Sorghum	cytosol	9.8	15.73
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	24.4	15.66
TraesCS1A01G073800.1	Wheat	mitochondrion	11.33	15.62
HORVU6Hr1G014310.1	Barley	mitochondrion	23.31	15.57
Os08t0107700-01	Rice	cytosol, mitochondrion	12.64	15.51
TraesCS6D01G047700.1	Wheat	mitochondrion	23.31	15.48
TraesCS1D01G057800.1	Wheat	mitochondrion	12.2	15.43
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	8.5	15.41
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	23.97	15.41
TraesCS6A01G083000.1	Wheat	cytosol	15.03	15.13
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	21.79	15.06
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	23.31	14.96
TraesCS1D01G069100.1	Wheat	mitochondrion	20.91	14.93
TraesCS2D01G532400.1	Wheat	cytosol	19.83	14.89
Bra027656.1-P	Field mustard	cytosol	30.5	14.88
TraesCS1B01G085400.1	Wheat	cytosol	20.7	14.82
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	25.49	14.77
OQU82856	Sorghum	cytosol	24.18	14.76
Os08t0107800-01	Rice	mitochondrion	20.04	14.74
TraesCS1B01G085900.1	Wheat	mitochondrion	26.14	14.74
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	21.13	14.72
TraesCS2A01G531000.1	Wheat	golgi	21.57	14.58
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	22.66	14.55
EES09203	Sorghum	cytosol	25.27	14.54
TraesCS1B01G038400.1	Wheat	cytosol	19.17	14.47
Zm00001d009733_P001	Maize	cytosol	25.05	14.47
TraesCS6D01G290900.1	Wheat	mitochondrion	23.09	14.46
TraesCS1B01G038500.1	Wheat	mitochondrion	24.84	14.43
TraesCS1D01G055300.1	Wheat	cytosol	19.39	14.4
TraesCS1D01G058400.1	Wheat	cytosol	16.12	14.37
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	24.62	14.36
TraesCS1D01G056700.1	Wheat	cytosol	18.95	14.33
TraesCS1D01G076900.1	Wheat	plastid	20.48	14.31
TraesCS2D01G532100.1	Wheat	mitochondrion	21.57	14.31
TraesCS1A01G067400.1	Wheat	mitochondrion	25.71	14.3
TraesCS2D01G532500.1	Wheat	plastid	21.13	14.26
TraesCS2A01G526200.1	Wheat	golgi	21.13	14.24
TraesCS1A01G031600.1	Wheat	cytosol	20.48	14.2
TraesCS2D01G532300.1	Wheat	plastid	23.97	14.14
TraesCS2A01G530600.1	Wheat	cytosol	23.53	14.12
KXG28799	Sorghum	plastid	23.31	14.08
TraesCS1B01G039100.1	Wheat	mitochondrion	23.97	14.05
TraesCS6D01G017700.1	Wheat	plastid	16.34	14.04
TraesCS1A01G067600.1	Wheat	mitochondrion	24.84	14.02
TraesCS1D01G068900.1	Wheat	mitochondrion	24.62	13.9
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	25.05	13.86
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	23.53	13.85
TraesCS1B01G071600.1	Wheat	mitochondrion	25.49	13.8
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	20.91	13.73
TraesCS1D01G068400.1	Wheat	mitochondrion	24.62	13.73
TraesCS2B01G560300.1	Wheat	cytosol	16.99	13.71
Os10t0495200-01	Rice	mitochondrion	23.31	13.68
TraesCS1A01G054700.2	Wheat	mitochondrion	24.18	13.67
TraesCS1B01G039700.1	Wheat	cytosol	18.08	13.65
EES07882	Sorghum	cytosol	23.09	13.64
TraesCS1B01G085300.1	Wheat	mitochondrion	23.53	13.64
Zm00001d007555_P001	Maize	plastid	24.18	13.64
TraesCS6B01G114300.1	Wheat	cytosol	11.55	13.62
Bra016758.1-P	Field mustard	plastid	34.2	13.55
KXG27690	Sorghum	cytosol, plastid	21.57	13.54
Os10t0497300-01	Rice	mitochondrion	23.31	13.48
TraesCS1D01G056200.1	Wheat	mitochondrion	24.18	13.45
TraesCS1D01G068500.1	Wheat	mitochondrion	23.75	13.42
HORVU0Hr1G035310.1	Barley	cytosol	16.99	13.4
Zm00001d007534_P001	Maize	plastid	22.66	13.38
TraesCS1B01G072400.1	Wheat	cytosol	20.26	13.38
TraesCS2B01G560700.1	Wheat	plastid	22.44	13.36
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	20.26	13.34
HORVU6Hr1G002890.6	Barley	cytosol, plastid	23.09	13.33
KXG35774	Sorghum	cytosol, mitochondrion	13.73	13.32
TraesCS2B01G559900.1	Wheat	cytosol	15.69	13.28
Zm00001d007531_P001	Maize	plastid	23.53	13.27
TraesCS1B01G039200.1	Wheat	mitochondrion	22.66	13.27
TraesCS1A01G054800.1	Wheat	cytosol	16.78	13.23
OQU82831	Sorghum	cytosol	17.65	13.21
Zm00001d007548_P001	Maize	plastid	23.31	13.14
CDY31277	Canola	plastid	27.45	13.14
TraesCS1D01G068800.1	Wheat	plastid	23.31	13.11
Zm00001d007559_P001	Maize	plastid	23.31	13.1
TraesCS1A01G054500.1	Wheat	mitochondrion	22.22	13.08
TraesCS1A01G074000.1	Wheat	mitochondrion	8.06	13.07
OQU80148	Sorghum	mitochondrion	20.7	13.07
TraesCS1B01G073100.1	Wheat	cytosol	17.21	13.04
HORVU1Hr1G004750.6	Barley	plastid	22.66	13.03
TraesCS2D01G532600.1	Wheat	plastid	22.0	13.02
TraesCS1A01G067000.1	Wheat	mitochondrion	20.26	12.99
HORVU6Hr1G076780.7	Barley	mitochondrion	23.31	12.99
TraesCS1D01G076500.1	Wheat	mitochondrion	18.74	12.95
OQU82823	Sorghum	cytosol	22.44	12.92
HORVU1Hr1G013810.1	Barley	plastid	23.53	12.87
TraesCS2A01G531100.1	Wheat	cytosol	15.9	12.83
Os10t0497432-01	Rice	mitochondrion	7.41	12.78
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	18.74	12.78
TraesCS1B01G075300.1	Wheat	cytosol	16.56	12.73
TraesCS1B01G072900.2	Wheat	mitochondrion	24.18	12.71
KXG19780	Sorghum	cytosol	16.34	12.69
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.65	12.68
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	21.13	12.66
Os08t0110200-01	Rice	mitochondrion	22.0	12.66
HORVU1Hr1G014040.1	Barley	mitochondrion	22.88	12.61
HORVU0Hr1G031920.1	Barley	plastid	23.53	12.56
TraesCS1A01G066600.1	Wheat	mitochondrion	7.19	12.55
OQU82827	Sorghum	cytosol	21.79	12.55
TraesCS1A01G057300.1	Wheat	cytosol	19.61	12.53
TraesCS1B01G092500.1	Wheat	mitochondrion	21.35	12.52
TraesCS6A01G311600.1	Wheat	mitochondrion	22.66	12.44
HORVU1Hr1G014060.1	Barley	plastid	23.97	12.36
HORVU1Hr1G011160.2	Barley	cytosol, plastid	23.97	12.29
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	6.1	12.28
TraesCS6A01G014600.1	Wheat	cytosol	10.46	12.15
HORVU1Hr1G011150.1	Barley	cytosol, plastid	23.31	12.12
TraesCS1A01G055500.1	Wheat	mitochondrion	5.66	11.98
Zm00001d009735_P001	Maize	cytosol	25.27	11.92
HORVU1Hr1G010890.5	Barley	cytosol	23.31	11.92
TraesCS1D01G056600.1	Wheat	mitochondrion	5.23	11.88
HORVU1Hr1G010970.1	Barley	mitochondrion	21.35	11.86
Os04t0351333-00	Rice	cytosol	22.44	11.72
HORVU1Hr1G011300.3	Barley	plastid	23.31	11.63
TraesCS1A01G073600.1	Wheat	mitochondrion	9.59	11.22
TraesCS1A01G055800.1	Wheat	mitochondrion	18.74	11.15
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	17.21	11.02
OQU82836	Sorghum	cytosol	14.6	10.95
TraesCS6B01G129100.1	Wheat	cytosol, plastid	6.75	10.76
CDY16033	Canola	cytosol	3.49	10.67
TraesCS1B01G073200.1	Wheat	cytosol	6.97	10.56
TraesCS1A01G073700.1	Wheat	cytosol	8.71	10.39
TraesCS1B01G084800.1	Wheat	cytosol	10.46	10.34
CDY34680	Canola	cytosol	20.48	10.31
OQU82834	Sorghum	cytosol	20.48	9.76
TraesCS1D01G068700.1	Wheat	cytosol	9.15	9.57
OQU82833	Sorghum	cytosol	8.5	8.71
OQU88581	Sorghum	cytosol	20.48	8.65
HORVU1Hr1G011400.44	Barley	plastid	11.55	8.6
TraesCS1D01G058500.1	Wheat	plastid	10.46	8.42
TraesCS1D01G076700.1	Wheat	cytosol	6.1	8.38
TraesCS1B01G038300.1	Wheat	plastid	9.8	8.24
TraesCS1D01G033000.1	Wheat	cytosol	7.19	8.17
TraesCS1D01G076400.1	Wheat	cytosol	6.1	7.71
TraesCS1A01G056000.1	Wheat	cytosol	6.75	7.71
TraesCS6B01G341800.2	Wheat	cytosol	6.32	7.27
TraesCS1B01G038600.1	Wheat	cytosol	5.23	6.61
TraesCS1A01G067800.1	Wheat	cytosol	5.23	6.42
TraesCS1D01G067600.1	Wheat	cytosol	4.36	5.48
TraesCS1D01G057700.1	Wheat	cytosol	3.27	4.62
TraesCS2D01G532200.1	Wheat	cytosol	2.61	4.1
TraesCS1A01G055600.1	Wheat	cytosol	2.4	3.38
CDY21063	Canola	plastid	2.4	2.0
CDY15970	Canola	cytosol	0.0	0.0
CDY26589	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400053556	EnsemblPlantsGene:PGSC0003DMG400020776	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR44149
PANTHER:PTHR44149:SF3	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	PGSC:PGSC0003DMG400020776	SEG:seg
SUPFAM:SSF81901	TIGRFAMs:TIGR00756	UniParc:UPI0002959913	UniProt:M1BV42	MapMan:35.1	:

Description

PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020776]

Coordinates

chr6:-:8849310..8852308

Molecular Weight (calculated)

51808.1 Da

IEP (calculated)

9.405

GRAVY (calculated)

0.066

Length

459 amino acids

Sequence
(BLAST)

001: MKRIYLRNGK GNGIPFLSSF ATSSAASAIT VRDYTNRITF EKVKCLDDVV TLSHQMIRMH LLPFVFAFSK LFKTMIKMSH CSAVLSLFGE IRKLGIPIDG
101: VILGGVINSY CLMHRADCAF SVLPIFLKNG IPFDVYMFTN LIRGFFHESK VKDAVELFKK LVKRNICEPD NVMYAIVMNG LSKRGHTQKT LNLLRLLNEM
201: KQKDIPPNLV TYSSIIDGLC KLGQWEKVKT FFSEMVSLNI YPNVQIFNVL IDGLCKEGKV EDAKEVMKHM IEKGVEPNII TYNAIMDGYC LRGQLDRARR
301: IFDILIDKGI EPSIISYNIL INGYCKKKEL AKAMQLFCEI SQKGSKPSIV TYNTILQGLF EVGRIGSARE IYVEMMSTGT IPDLYTHGTL LNGYFKYGFV
401: EEAMSLLNKL ERKSEDTNIA ISNVVINGLS KNSKFDEAHA IFEKLSSMGL LPNAKHTIL

Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)

001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS

Arabidopsis Description

ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.