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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 3
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 58.82 88.06
TraesCS2A01G526200.1 Wheat golgi 77.52 87.08
TraesCS2A01G531000.1 Wheat golgi 77.12 86.89
TraesCS2D01G533000.1 Wheat cytosol, extracellular 74.51 86.49
TraesCS2D01G532400.1 Wheat cytosol 68.89 86.25
TraesCS2D01G532500.1 Wheat plastid 76.08 85.59
TraesCS2D01G532600.1 Wheat plastid 86.67 85.44
TraesCS2A01G531100.1 Wheat cytosol 62.48 84.01
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 47.58 82.92
TraesCS1A01G031600.1 Wheat cytosol 49.67 57.4
TraesCS1A01G067600.1 Wheat mitochondrion 58.43 54.98
TraesCS1A01G031700.1 Wheat plastid 52.94 54.66
TraesCS1A01G073700.1 Wheat cytosol 27.32 54.29
TraesCS1A01G067400.1 Wheat mitochondrion 58.3 54.06
TraesCS1A01G073800.1 Wheat mitochondrion 23.53 54.05
TraesCS1A01G067700.1 Wheat extracellular 23.66 53.71
TraesCS1A01G054700.2 Wheat mitochondrion 56.73 53.45
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 49.8 53.14
TraesCS1A01G054800.1 Wheat cytosol 40.39 53.09
TraesCS1A01G056000.1 Wheat cytosol 27.84 52.99
TraesCS1A01G067800.1 Wheat cytosol 25.62 52.41
TraesCS1A01G055600.1 Wheat cytosol 22.22 52.31
TraesCS6A01G311600.1 Wheat mitochondrion 56.86 52.03
TraesCS1A01G055800.1 Wheat mitochondrion 52.42 52.01
TraesCS1A01G067000.1 Wheat mitochondrion 48.24 51.54
TraesCS1A01G054500.1 Wheat mitochondrion 52.29 51.28
TraesCS1A01G057300.1 Wheat cytosol 47.06 50.14
TraesCS1A01G073600.1 Wheat mitochondrion 25.36 49.49
TraesCS1A01G055500.1 Wheat mitochondrion 13.99 49.31
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 32.42 49.3
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 24.05 48.68
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 30.2 47.73
TraesCS1A01G066600.1 Wheat mitochondrion 16.34 47.53
TraesCS6A01G014600.1 Wheat cytosol 24.44 47.34
TraesCS1A01G074000.1 Wheat mitochondrion 16.86 45.58
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 41.96 44.96
TraesCS6A01G083000.1 Wheat cytosol 25.62 42.98
TraesCS6A01G015000.1 Wheat mitochondrion 22.22 40.96
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 11.5 34.78
Solyc06g007280.2.1 Tomato cytosol 10.72 32.16
KRH39054 Soybean cytosol 19.61 30.18
PGSC0003DMT400052977 Potato cytosol 15.29 30.08
VIT_12s0028g02320.t01 Wine grape mitochondrion 18.69 29.98
VIT_14s0081g00110.t01 Wine grape cytosol 19.22 29.94
KRH39004 Soybean cytosol 19.35 29.78
KRH39057 Soybean cytosol 19.35 29.78
KRH09084 Soybean plastid 19.74 29.55
KRH39074 Soybean cytosol 18.95 29.18
KRH08636 Soybean cytosol 19.87 29.12
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 18.95 28.71
KRH39072 Soybean cytosol 18.56 28.63
KRH39112 Soybean cytosol 18.56 28.57
VIT_14s0081g00270.t01 Wine grape plastid 21.57 28.45
KRH08628 Soybean plastid 20.39 28.26
KRH40513 Soybean plastid 12.94 28.21
KRH39050 Soybean mitochondrion 19.61 28.2
Bra027029.1-P Field mustard mitochondrion 8.89 27.98
VIT_14s0081g00120.t01 Wine grape plastid 21.31 27.96
KRH09121 Soybean mitochondrion 19.35 27.72
KRH17148 Soybean mitochondrion 19.74 27.71
KRH08671 Soybean cytosol, mitochondrion 20.0 27.67
KRH08607 Soybean cytosol 20.26 27.63
KRH08639 Soybean mitochondrion, plastid 20.39 27.61
Solyc06g005220.2.1 Tomato cytosol 14.64 27.59
AT5G16640.1 Thale cress mitochondrion 18.17 27.58
KRH09154 Soybean mitochondrion 20.0 27.52
KRH08277 Soybean plastid 20.39 27.51
KRH39066 Soybean cytosol 19.87 27.39
KRH08625 Soybean plastid 20.52 27.26
KRH31646 Soybean cytosol 18.43 27.22
Bra036649.1-P Field mustard cytosol 13.86 27.11
KRH40400 Soybean plastid 20.39 27.04
AT3G16710.1 Thale cress mitochondrion 17.91 27.02
KRH09082 Soybean cytosol 14.38 26.96
CDX68679 Canola cytosol 4.05 26.96
Solyc06g007810.1.1 Tomato cytosol 9.41 26.87
Bra027636.1-P Field mustard cytosol 11.37 26.85
Bra006187.1-P Field mustard plastid 10.2 26.8
KRH48615 Soybean mitochondrion 19.09 26.79
Bra036651.1-P Field mustard mitochondrion 18.69 26.73
KRH25652 Soybean cytosol, golgi 18.69 26.48
VIT_14s0081g00280.t01 Wine grape mitochondrion 22.09 26.45
AT1G63330.2 Thale cress cytosol 19.22 26.3
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 18.04 26.29
Bra025516.1-P Field mustard cytosol, mitochondrion 16.34 26.21
Bra021192.1-P Field mustard plastid 17.25 26.19
Bra026882.1-P Field mustard cytosol 18.17 26.03
AT1G62680.2 Thale cress plastid 18.56 25.91
AT1G62930.1 Thale cress plastid 21.18 25.76
AT1G62670.1 Thale cress mitochondrion 21.18 25.71
PGSC0003DMT400008759 Potato cytosol 10.72 25.71
VIT_14s0030g02280.t01 Wine grape plastid 18.82 25.67
KRH41817 Soybean mitochondrion 18.56 25.59
KRH09095 Soybean plastid 19.48 25.47
Bra026971.1-P Field mustard mitochondrion 20.91 25.44
Bra027026.1-P Field mustard mitochondrion 17.39 25.43
AT1G63130.1 Thale cress mitochondrion 20.91 25.4
AT1G64580.1 Thale cress mitochondrion 17.25 25.24
KRH09097 Soybean plastid 19.22 25.21
AT1G63070.1 Thale cress mitochondrion 19.35 25.08
AT1G62720.1 Thale cress mitochondrion 15.82 24.95
AT1G63150.1 Thale cress mitochondrion 20.26 24.64
AT1G63400.1 Thale cress cytosol, plastid 18.56 24.61
AT1G63080.3 Thale cress mitochondrion 19.74 24.59
PGSC0003DMT400025067 Potato cytosol 15.29 24.58
AT1G62910.1 Thale cress mitochondrion 20.26 24.53
AT1G12300.1 Thale cress mitochondrion 20.39 24.49
AT1G12620.1 Thale cress cytosol, mitochondrion 19.87 24.48
PGSC0003DMT400025074 Potato cytosol 17.65 24.46
AT1G64583.1 Thale cress mitochondrion 16.34 24.41
Bra031731.1-P Field mustard mitochondrion 16.21 24.41
AT1G06580.1 Thale cress mitochondrion 15.82 24.2
Solyc06g007740.1.1 Tomato cytosol 18.56 24.07
PGSC0003DMT400025087 Potato endoplasmic reticulum 15.56 24.04
Bra026958.1-P Field mustard mitochondrion 20.0 24.02
AT1G62590.1 Thale cress mitochondrion 19.87 23.97
Bra026884.1-P Field mustard cytosol 14.38 23.97
AT4G26800.2 Thale cress mitochondrion, plastid 16.08 23.93
AT5G41170.1 Thale cress mitochondrion 16.47 23.91
PGSC0003DMT400008757 Potato cytosol 15.56 23.9
Solyc06g007300.1.1 Tomato extracellular 18.43 23.82
PGSC0003DMT400052971 Potato mitochondrion 18.43 23.78
PGSC0003DMT400053185 Potato mitochondrion 18.3 23.73
Bra026954.1-P Field mustard mitochondrion 20.0 23.54
PGSC0003DMT400053556 Potato mitochondrion 14.12 23.53
Bra028267.1-P Field mustard mitochondrion 19.22 23.48
AT1G12775.1 Thale cress cytosol, mitochondrion 19.74 23.45
AT3G22470.1 Thale cress cytosol, mitochondrion 18.95 23.42
Bra016762.1-P Field mustard mitochondrion 18.56 23.39
Bra027658.1-P Field mustard cytosol, mitochondrion 16.6 23.39
AT1G12700.2 Thale cress cytosol 18.69 23.14
AT1G62914.1 Thale cress mitochondrion 15.95 23.11
Solyc04g080120.1.1 Tomato extracellular 18.43 23.04
VIT_14s0030g02260.t01 Wine grape cytosol 13.33 23.02
Bra026401.1-P Field mustard plastid 16.08 22.99
PGSC0003DMT400015293 Potato mitochondrion 18.17 22.79
PGSC0003DMT400015298 Potato mitochondrion 18.17 22.79
KRH08599 Soybean cytosol, plastid 19.74 22.57
PGSC0003DMT400056665 Potato mitochondrion 17.25 22.41
Bra026957.1-P Field mustard mitochondrion 17.65 22.39
Bra027726.1-P Field mustard mitochondrion 13.46 21.87
PGSC0003DMT400056663 Potato plastid 16.73 21.77
PGSC0003DMT400053182 Potato cytosol 16.73 21.37
PGSC0003DMT400008760 Potato mitochondrion 16.34 21.33
KRH09085 Soybean mitochondrion 19.09 20.74
Bra026836.1-P Field mustard cytosol, mitochondrion 13.2 20.57
AT1G64100.2 Thale cress cytosol 21.05 19.98
KRH12873 Soybean cytosol 16.34 17.96
Bra027656.1-P Field mustard cytosol 20.78 16.9
KRH39064 Soybean cytosol 20.91 16.51
Bra016758.1-P Field mustard plastid 18.56 12.25
Protein Annotations
EnsemblPlants:TraesCS2A01G530600.1EnsemblPlantsGene:TraesCS2A01G530600Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF874
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375SEG:segSUPFAM:SSF48452
TIGRFAMs:TIGR00756MapMan:35.1::::
Description
No Description!
Coordinates
chr2A:+:748285150..748287447
Molecular Weight (calculated)
83726.6 Da
IEP (calculated)
8.170
GRAVY (calculated)
0.135
Length
765 amino acids
Sequence
(BLAST)
001: MPTARLSSIS TSSFRAPLAA LAAATERVLA GTLSREDAHH LFDELLGQAA AAPEHGLNNF LAALARAPPS AACSDGPGLA IALFNRMSRG AGARVVSPTL
101: CTYSILMDCC CRARRPELVV AFFGRLLRLG LRLDIISSSN LLKGLCQAKR SNEALDMLLH RMPELDCAPD VFSFNIVING CFKEGEVDKA CNLFHEMPQL
201: GVQPDVVTYT SIINALSKSG AMDKAEVVLR QMVDQGIGPN IRTYTSLIHG YSASGQWKAA ARVFKEMVSL GVLPNVVTWN SFMDSLCKHR RTKEARDIFD
301: SMAAKGQKPD IVSYSIMLNG YAKEGYFDDM TDLFNSMLQN GIVPNHHVFN ILINAYAKRG LMDEAMHMFE VMRQQGVNPN VVSYQVIMDS LCKMGRMDAA
401: LEKFNQMVNQ GVSADKAVYR CLVLGSCSHG DFVKAKELIS EAVNRGLCSN SVFFYSVIND LCKEGKVKEA QDMFHFIVGI GQRPDVIMYT SLMDGYCLVG
501: KVEEALRVLD AMKSAGLQPT AVTYAILLNG YCKIGRIADG LSLFKEMSLS GVKPTTIMYN IILDGLFRSG RTVSAKEKFC TMSESGIPVG IDTYNIVLSG
601: LCKNNCTGEA IELFKKLRAM NVKIDVITLN IMISAMFKTR RIEEAKDLFA TISAIGLVPS VVTYSLMMTN FIKEGLLAEA DDMFLAVEKA NCAPNSRLLN
701: HVVRVLLEKG AVVKGANYLA KLDAKQMSLD VSTISLIVSL FSGEGKLREH VKLLPVKYQP PENSG
Best Arabidopsis Sequence Match ( AT1G12620.1 )
(BLAST)
001: MRGLIQTRLL ETGTLRTALF LSCYGRVFSS VSDGKGKVSY RERLRSGIVD IKEDDAVDLF QEMTRSRPRP RLIDFSRLFS VVARTKQYDL VLDLCKQMEL
101: KGIAHNLYTL SIMINCCCRC RKLSLAFSAM GKIIKLGYEP DTVTFSTLIN GLCLEGRVSE ALELVDRMVE MGHKPTLITL NALVNGLCLN GKVSDAVLLI
201: DRMVETGFQP NEVTYGPVLK VMCKSGQTAL AMELLRKMEE RKIKLDAVKY SIIIDGLCKD GSLDNAFNLF NEMEIKGFKA DIIIYTTLIR GFCYAGRWDD
301: GAKLLRDMIK RKITPDVVAF SALIDCFVKE GKLREAEELH KEMIQRGISP DTVTYTSLID GFCKENQLDK ANHMLDLMVS KGCGPNIRTF NILINGYCKA
401: NLIDDGLELF RKMSLRGVVA DTVTYNTLIQ GFCELGKLEV AKELFQEMVS RRVRPDIVSY KILLDGLCDN GEPEKALEIF EKIEKSKMEL DIGIYNIIIH
501: GMCNASKVDD AWDLFCSLPL KGVKPDVKTY NIMIGGLCKK GSLSEADLLF RKMEEDGHSP NGCTYNILIR AHLGEGDATK SAKLIEEIKR CGFSVDASTV
601: KMVVDMLSDG RLKKSFLDML S
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12620 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASZ8]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.