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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 PGSC0003DMT400037344 AT4G26630.1 25387881
AT1G62670.1 PGSC0003DMT400057390 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400008759 Potato cytosol 48.22 89.03
PGSC0003DMT400008757 Potato cytosol 74.19 87.75
PGSC0003DMT400056663 Potato plastid 86.59 86.73
PGSC0003DMT400008760 Potato mitochondrion 83.7 84.13
Solyc06g007810.1.1 Tomato cytosol 37.35 82.09
PGSC0003DMT400025074 Potato cytosol 71.31 76.09
PGSC0003DMT400025087 Potato endoplasmic reticulum 63.67 75.76
PGSC0003DMT400052977 Potato cytosol 49.92 75.58
PGSC0003DMT400052971 Potato mitochondrion 75.04 74.54
PGSC0003DMT400053185 Potato mitochondrion 73.17 73.05
PGSC0003DMT400025067 Potato cytosol 58.23 72.06
PGSC0003DMT400053182 Potato cytosol 72.67 71.45
PGSC0003DMT400053556 Potato mitochondrion 54.84 70.37
PGSC0003DMT400015293 Potato mitochondrion 52.8 50.98
PGSC0003DMT400015298 Potato mitochondrion 52.8 50.98
VIT_12s0028g02320.t01 Wine grape mitochondrion 35.82 44.23
VIT_14s0081g00270.t01 Wine grape plastid 41.6 42.24
VIT_14s0081g00120.t01 Wine grape plastid 40.75 41.17
VIT_14s0081g00110.t01 Wine grape cytosol 33.45 40.12
KRH70370 Soybean cytosol 35.31 38.24
CDY39810 Canola cytosol 25.3 38.11
VIT_14s0081g00280.t01 Wine grape mitochondrion 41.09 37.87
CDY16110 Canola extracellular 26.32 37.8
VIT_14s0030g02280.t01 Wine grape plastid 35.82 37.61
Bra036649.1-P Field mustard cytosol 24.96 37.6
CDY03257 Canola cytosol 24.96 37.6
CDY09968 Canola cytosol 18.68 37.41
Bra027636.1-P Field mustard cytosol 20.54 37.35
CDY06217 Canola cytosol 18.34 36.86
CDY51169 Canola cytosol 26.32 36.64
Bra026882.1-P Field mustard cytosol 32.94 36.33
KRH49698 Soybean cytosol 34.97 36.14
CDY33797 Canola mitochondrion 31.41 36.13
CDY34870 Canola mitochondrion 17.49 35.89
CDX71969 Canola cytosol 24.11 35.86
Bra027029.1-P Field mustard mitochondrion 14.77 35.8
CDX67634 Canola cytosol 25.64 35.7
KRH58843 Soybean nucleus 37.01 35.68
KRH75045 Soybean mitochondrion 36.16 35.68
Bra026958.1-P Field mustard mitochondrion 38.54 35.64
Bra026884.1-P Field mustard cytosol 27.67 35.51
Bra031731.1-P Field mustard mitochondrion 30.56 35.43
KRH42744 Soybean mitochondrion 36.5 35.19
CDY00489 Canola mitochondrion 34.97 35.15
AT1G62720.1 Thale cress mitochondrion 28.69 34.85
KRH75063 Soybean mitochondrion, plastid 35.65 34.77
AT3G22470.1 Thale cress cytosol, mitochondrion 36.5 34.73
CDY16002 Canola cytosol 18.34 34.73
Bra006187.1-P Field mustard plastid 17.15 34.71
KRH75048 Soybean mitochondrion 35.82 34.7
AT5G16640.1 Thale cress mitochondrion 29.54 34.52
CDY34969 Canola mitochondrion 29.54 34.39
CDY65983 Canola mitochondrion 24.62 34.36
Bra028267.1-P Field mustard mitochondrion 36.5 34.34
Bra026957.1-P Field mustard mitochondrion 35.14 34.33
AT1G12700.2 Thale cress cytosol 35.99 34.3
AT1G12620.1 Thale cress cytosol, mitochondrion 36.16 34.3
Bra021192.1-P Field mustard plastid 29.2 34.13
CDY16031 Canola cytosol 18.0 34.08
AT1G12300.1 Thale cress mitochondrion 36.84 34.07
Bra026971.1-P Field mustard mitochondrion 36.33 34.02
KRH38755 Soybean mitochondrion 34.3 34.01
KRH09256 Soybean mitochondrion 32.26 33.99
CDY31272 Canola mitochondrion 32.77 33.98
CDY26565 Canola mitochondrion 32.6 33.74
CDY26588 Canola extracellular 18.51 33.64
CDX69436 Canola plastid 28.35 33.53
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 31.24 33.52
CDY26593 Canola cytosol 34.63 33.5
CDY26607 Canola cytosol 25.81 33.26
CDY46909 Canola mitochondrion 16.47 33.22
AT1G63080.3 Thale cress mitochondrion 34.47 33.06
CDY25492 Canola mitochondrion 27.5 32.99
Bra016762.1-P Field mustard mitochondrion 33.96 32.95
CDY68929 Canola mitochondrion 33.96 32.95
Bra025516.1-P Field mustard cytosol, mitochondrion 26.66 32.91
AT1G62930.1 Thale cress plastid 35.14 32.91
AT1G62670.1 Thale cress mitochondrion 35.14 32.86
Bra026954.1-P Field mustard mitochondrion 36.16 32.77
AT1G12775.1 Thale cress cytosol, mitochondrion 35.82 32.76
AT1G63330.2 Thale cress cytosol 31.07 32.74
AT1G63130.1 Thale cress mitochondrion 34.97 32.7
CDY08386 Canola cytosol 24.62 32.58
AT1G62910.1 Thale cress mitochondrion 34.8 32.44
CDY46394 Canola mitochondrion 26.49 32.43
CDY48949 Canola mitochondrion 26.49 32.43
Bra026836.1-P Field mustard cytosol, mitochondrion 26.99 32.38
AT3G16710.1 Thale cress mitochondrion 27.84 32.35
CDY34688 Canola cytosol 19.86 32.32
CDY34375 Canola mitochondrion 28.35 32.3
Bra036651.1-P Field mustard mitochondrion 29.2 32.15
AT1G63400.1 Thale cress cytosol, plastid 31.41 32.06
VIT_14s0030g02260.t01 Wine grape cytosol 24.11 32.05
AT1G64583.1 Thale cress mitochondrion 27.84 32.03
AT1G06580.1 Thale cress mitochondrion 27.16 32.0
CDY31271 Canola mitochondrion 26.32 31.89
AT1G63070.1 Thale cress mitochondrion 31.92 31.86
AT1G63150.1 Thale cress mitochondrion 33.96 31.8
CDY33753 Canola mitochondrion 23.94 31.76
Bra027026.1-P Field mustard mitochondrion 28.18 31.74
CDY49646 Canola mitochondrion 26.99 31.74
AT1G62680.2 Thale cress plastid 29.37 31.57
CDY16033 Canola cytosol 7.98 31.33
CDY46912 Canola mitochondrion 26.15 31.17
AT5G41170.1 Thale cress mitochondrion 27.84 31.12
CDY35831 Canola mitochondrion 27.16 31.07
AT1G64580.1 Thale cress mitochondrion 27.5 30.98
Bra027658.1-P Field mustard cytosol, mitochondrion 28.52 30.94
AT1G62590.1 Thale cress mitochondrion 33.11 30.76
AT1G62914.1 Thale cress mitochondrion 27.5 30.68
CDY16032 Canola mitochondrion 21.22 30.64
CDY26589 Canola cytosol 3.57 30.43
CDY16003 Canola cytosol, plastid 19.69 29.67
CDY25519 Canola mitochondrion, plastid 31.75 29.26
CDY66358 Canola mitochondrion 19.35 29.23
CDY28348 Canola mitochondrion, plastid 29.54 29.1
AT4G26800.2 Thale cress mitochondrion, plastid 25.3 28.99
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 14.6 28.96
CDY47835 Canola mitochondrion 21.22 28.6
CDY29251 Canola mitochondrion 24.62 28.6
TraesCS2B01G126900.1 Wheat cytosol 18.34 28.27
Bra027726.1-P Field mustard mitochondrion 22.41 28.03
TraesCS1A01G067700.1 Wheat extracellular 15.79 27.6
Bra026401.1-P Field mustard plastid 24.96 27.48
CDX89301 Canola plastid 24.96 27.48
HORVU1Hr1G018190.2 Barley cytosol 13.24 27.37
CDX68680 Canola mitochondrion 21.39 27.27
Zm00001d018982_P001 Maize mitochondrion 16.13 27.14
TraesCS6B01G127200.1 Wheat cytosol 15.79 27.03
CDY25522 Canola mitochondrion, plastid 20.37 26.85
HORVU1Hr1G011250.1 Barley cytosol 13.41 26.78
Os10t0501700-00 Rice cytosol 20.2 26.21
HORVU6Hr1G017870.2 Barley mitochondrion 13.07 25.67
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 16.47 25.66
TraesCS6D01G083300.1 Wheat mitochondrion 19.35 25.56
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 13.92 25.23
TraesCS1D01G058000.1 Wheat cytosol 17.32 25.12
TraesCSU01G089800.1 Wheat mitochondrion 14.94 25.07
TraesCS6A01G015000.1 Wheat mitochondrion 17.66 25.06
Os08t0248400-01 Rice mitochondrion 18.68 25.0
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 21.22 24.75
Os10t0495100-01 Rice cytosol, mitochondrion 19.35 24.73
TraesCSU01G090200.1 Wheat cytosol 18.51 24.66
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 21.05 24.65
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 20.03 24.38
CDY66357 Canola cytosol 15.62 24.27
AT1G64100.2 Thale cress cytosol 33.11 24.19
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 19.69 24.12
TraesCS6B01G127500.1 Wheat cytosol 20.03 24.08
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 17.66 24.02
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 15.45 24.01
Os10t0497366-00 Rice mitochondrion 16.3 23.94
TraesCS6D01G083400.1 Wheat mitochondrion 19.86 23.73
TraesCS6D01G076500.1 Wheat plastid 18.17 23.62
TraesCS7D01G231400.1 Wheat cytosol, plastid 16.13 23.57
TraesCS6D01G083100.1 Wheat cytosol 19.52 23.47
KXG34536 Sorghum mitochondrion 22.75 23.43
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 20.2 23.29
TraesCSU01G089700.1 Wheat mitochondrion 18.85 23.03
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 16.98 22.78
CDY34370 Canola cytosol 31.75 22.78
TraesCS1D01G068600.1 Wheat plastid 13.07 22.65
OQU88594 Sorghum cytosol 20.03 22.61
TraesCS1D01G058400.1 Wheat cytosol 19.69 22.52
TraesCS1B01G038200.1 Wheat mitochondrion 24.11 22.43
OQU82832 Sorghum cytosol 10.87 22.38
EER95949 Sorghum mitochondrion 24.96 22.17
TraesCS6D01G017800.1 Wheat cytosol 20.2 22.16
CDX81633 Canola extracellular, golgi, plasma membrane 34.13 22.11
TraesCS1B01G072700.1 Wheat cytosol 19.02 21.96
TraesCS6A01G083000.1 Wheat cytosol 16.98 21.93
TraesCS6B01G021600.1 Wheat mitochondrion 26.49 21.79
Os10t0499500-01 Rice mitochondrion 18.68 21.74
HORVU6Hr1G014310.1 Barley mitochondrion 25.3 21.69
Os08t0107700-01 Rice cytosol, mitochondrion 13.75 21.66
TraesCS1B01G038400.1 Wheat cytosol 22.24 21.55
TraesCS7B01G469500.1 Wheat cytosol 20.37 21.35
TraesCS1A01G054800.1 Wheat cytosol 21.05 21.31
TraesCS1D01G056700.1 Wheat cytosol 21.9 21.25
TraesCS1D01G057800.1 Wheat mitochondrion 13.07 21.21
TraesCS1B01G072300.1 Wheat plastid 20.37 21.13
TraesCS1B01G085400.1 Wheat cytosol 22.92 21.06
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 25.47 20.98
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 9.0 20.95
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 23.6 20.93
TraesCS6D01G290900.1 Wheat mitochondrion 25.98 20.87
TraesCS6D01G047700.1 Wheat mitochondrion 24.45 20.84
TraesCS6D01G017700.1 Wheat plastid 18.85 20.79
TraesCS1B01G086000.1 Wheat plastid 24.11 20.7
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 25.13 20.7
Os08t0107800-01 Rice mitochondrion 21.9 20.67
TraesCS1B01G073100.1 Wheat cytosol 21.22 20.63
TraesCS1B01G315500.1 Wheat mitochondrion 11.21 20.56
TraesCS1D01G055300.1 Wheat cytosol 21.56 20.55
TraesCS1B01G073200.1 Wheat cytosol 10.53 20.46
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 24.79 20.45
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 24.79 20.42
Bra027656.1-P Field mustard cytosol 32.43 20.3
KXG35774 Sorghum cytosol, mitochondrion 16.3 20.3
HORVU0Hr1G035310.1 Barley cytosol 20.03 20.27
TraesCS1A01G031700.1 Wheat plastid 25.47 20.24
CDY15970 Canola cytosol 3.23 20.21
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 16.47 20.21
Zm00001d009733_P001 Maize cytosol 27.16 20.13
TraesCS1B01G092600.1 Wheat plastid 17.66 20.12
KXG27690 Sorghum cytosol, plastid 24.96 20.11
TraesCS1A01G031600.1 Wheat cytosol 22.58 20.09
EES07882 Sorghum cytosol 26.49 20.08
TraesCS1B01G039700.1 Wheat cytosol 20.71 20.07
EES09203 Sorghum cytosol 27.16 20.05
TraesCS1B01G085900.1 Wheat mitochondrion 27.67 20.02
OQU82831 Sorghum cytosol 20.71 19.9
OQU82823 Sorghum cytosol 26.83 19.82
TraesCS2B01G559900.1 Wheat cytosol 18.17 19.74
OQU82827 Sorghum cytosol 26.66 19.7
Zm00001d007534_P001 Maize plastid 25.98 19.69
TraesCS1A01G067400.1 Wheat mitochondrion 27.5 19.64
Os10t0495200-01 Rice mitochondrion 25.98 19.57
TraesCS1A01G067600.1 Wheat mitochondrion 26.99 19.56
TraesCS1D01G068900.1 Wheat mitochondrion 26.99 19.56
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 23.09 19.51
TraesCS2B01G560300.1 Wheat cytosol 18.85 19.51
TraesCS1B01G072400.1 Wheat cytosol 22.92 19.42
OQU82856 Sorghum cytosol 24.79 19.41
TraesCS1D01G068500.1 Wheat mitochondrion 26.66 19.34
TraesCS1A01G067000.1 Wheat mitochondrion 23.43 19.27
TraesCS2D01G533000.1 Wheat cytosol, extracellular 21.56 19.27
TraesCS1B01G075300.1 Wheat cytosol 19.52 19.26
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 20.88 19.25
TraesCS1B01G039100.1 Wheat mitochondrion 25.47 19.16
TraesCS2A01G531000.1 Wheat golgi 22.07 19.15
Os04t0349600-01 Rice plastid 12.56 19.12
TraesCS1B01G038500.1 Wheat mitochondrion 25.64 19.11
KXG28799 Sorghum plastid 24.62 19.08
TraesCS1D01G056200.1 Wheat mitochondrion 26.66 19.03
TraesCS6B01G114300.1 Wheat cytosol 12.56 19.02
TraesCS6A01G311600.1 Wheat mitochondrion 26.99 19.02
Os10t0497300-01 Rice mitochondrion 25.64 19.02
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 11.04 19.01
TraesCS1D01G068800.1 Wheat plastid 26.32 19.0
TraesCS2A01G531100.1 Wheat cytosol 18.34 18.98
TraesCS1B01G085300.1 Wheat mitochondrion 25.47 18.94
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 25.47 18.94
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 21.56 18.87
OQU80148 Sorghum mitochondrion 23.26 18.84
TraesCS1D01G068400.1 Wheat mitochondrion 26.32 18.83
TraesCS1D01G069100.1 Wheat mitochondrion 20.54 18.82
Zm00001d007531_P001 Maize plastid 25.98 18.8
OQU82836 Sorghum cytosol 19.52 18.79
TraesCS1B01G071600.1 Wheat mitochondrion 26.99 18.75
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 24.79 18.72
Zm00001d007555_P001 Maize plastid 25.81 18.67
Bra016758.1-P Field mustard plastid 36.67 18.64
TraesCS1A01G073800.1 Wheat mitochondrion 10.53 18.62
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 26.15 18.55
TraesCS2D01G532500.1 Wheat plastid 21.39 18.53
TraesCS1A01G057300.1 Wheat cytosol 22.58 18.52
TraesCS1A01G054700.2 Wheat mitochondrion 25.47 18.47
HORVU6Hr1G076780.7 Barley mitochondrion 25.81 18.45
Zm00001d007548_P001 Maize plastid 25.47 18.43
Os10t0497432-01 Rice mitochondrion 8.32 18.42
HORVU6Hr1G002890.6 Barley cytosol, plastid 24.79 18.36
Zm00001d007559_P001 Maize plastid 25.47 18.36
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 23.77 18.28
TraesCS2A01G526200.1 Wheat golgi 21.05 18.21
TraesCS1A01G054500.1 Wheat mitochondrion 24.11 18.21
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 24.28 18.17
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 21.56 18.17
TraesCS2D01G532400.1 Wheat cytosol 18.85 18.17
KXG19780 Sorghum cytosol 18.17 18.1
TraesCS2D01G532100.1 Wheat mitochondrion 21.22 18.06
TraesCS2D01G532300.1 Wheat plastid 23.77 17.99
TraesCS1B01G039200.1 Wheat mitochondrion 23.94 17.98
TraesCS1D01G076500.1 Wheat mitochondrion 20.2 17.92
HORVU1Hr1G010970.1 Barley mitochondrion 25.13 17.92
TraesCS2B01G560700.1 Wheat plastid 23.26 17.77
HORVU1Hr1G014040.1 Barley mitochondrion 25.13 17.77
TraesCS6A01G014600.1 Wheat cytosol 11.88 17.72
HORVU0Hr1G031920.1 Barley plastid 25.81 17.67
TraesCS1B01G072900.2 Wheat mitochondrion 26.15 17.64
TraesCS1A01G055800.1 Wheat mitochondrion 22.92 17.51
HORVU1Hr1G014060.1 Barley plastid 26.15 17.3
TraesCS2A01G530600.1 Wheat cytosol 22.41 17.25
HORVU1Hr1G013810.1 Barley plastid 24.45 17.16
TraesCS2D01G532600.1 Wheat plastid 22.58 17.14
HORVU1Hr1G011150.1 Barley cytosol, plastid 25.64 17.1
HORVU1Hr1G004750.6 Barley plastid 23.09 17.04
TraesCS1B01G092500.1 Wheat mitochondrion 22.58 16.99
Os08t0110200-01 Rice mitochondrion 22.92 16.92
TraesCS1A01G073700.1 Wheat cytosol 11.04 16.88
CDY31277 Canola plastid 27.33 16.79
HORVU1Hr1G011160.2 Barley cytosol, plastid 25.47 16.76
HORVU1Hr1G010890.5 Barley cytosol 25.47 16.7
HORVU1Hr1G011300.3 Barley plastid 25.98 16.63
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 20.03 16.46
TraesCS1D01G076900.1 Wheat plastid 18.34 16.44
TraesCS1D01G068700.1 Wheat cytosol 12.22 16.4
TraesCS1B01G084800.1 Wheat cytosol 12.73 16.16
TraesCS1A01G073600.1 Wheat mitochondrion 10.7 16.07
Zm00001d009735_P001 Maize cytosol 26.49 16.03
Os04t0351333-00 Rice cytosol 23.77 15.93
TraesCS1A01G056000.1 Wheat cytosol 10.36 15.17
OQU82833 Sorghum cytosol 11.38 14.96
OQU82834 Sorghum cytosol 24.45 14.95
TraesCS6B01G341800.2 Wheat cytosol 10.02 14.79
TraesCS1D01G076700.1 Wheat cytosol 8.32 14.67
HORVU1Hr1G011400.44 Barley plastid 15.11 14.45
TraesCS1D01G056600.1 Wheat mitochondrion 4.92 14.36
TraesCS1D01G058500.1 Wheat plastid 13.41 13.86
TraesCS1D01G076400.1 Wheat cytosol 8.32 13.5
TraesCS1A01G055500.1 Wheat mitochondrion 4.92 13.36
TraesCS6B01G129100.1 Wheat cytosol, plastid 6.45 13.19
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 5.09 13.16
TraesCS1A01G067800.1 Wheat cytosol 8.32 13.1
TraesCS1A01G074000.1 Wheat mitochondrion 6.28 13.07
CDY34680 Canola cytosol 20.03 12.94
TraesCS1A01G066600.1 Wheat mitochondrion 5.77 12.93
TraesCS1D01G067600.1 Wheat cytosol 7.81 12.6
TraesCS1B01G038600.1 Wheat cytosol 7.64 12.4
TraesCS1D01G033000.1 Wheat cytosol 8.49 12.38
TraesCS1A01G055600.1 Wheat cytosol 6.62 12.0
OQU88581 Sorghum cytosol 21.56 11.68
TraesCS1D01G057700.1 Wheat cytosol 6.11 11.08
TraesCS1B01G038300.1 Wheat plastid 10.19 10.99
TraesCS2D01G532200.1 Wheat cytosol 5.09 10.24
CDY21063 Canola plastid 2.21 2.37
Protein Annotations
EnsemblPlants:PGSC0003DMT400056665EnsemblPlantsGene:PGSC0003DMG400022036Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF745
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PGSC:PGSC0003DMG400022036SEG:seg
SUPFAM:SSF81901TIGRFAMs:TIGR00756UniParc:UPI0002954648UniProt:M1BZR7MapMan:35.1:
Description
PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400022036]
Coordinates
chr6:+:2368660..2373689
Molecular Weight (calculated)
66951.6 Da
IEP (calculated)
9.147
GRAVY (calculated)
-0.041
Length
589 amino acids
Sequence
(BLAST)
001: MAMSKISLRK CNGILSISSF HISYSYFSSY SRSSKVKGRV VLNFEKLKCL DDAVTLFHQM VRMKPLPSVV DFSKLFKTMT SMKHYSPVLS LFRQMRKLGI
101: PIDGFILNSV INSYCLMHRA DFGFSVLPIY LKNGIPFNNV TFTTLIRGIF AENKVKDAVE LFKKLVREKI CVPDEIMYAT VMSGLSKRGH TQKTLSLLRL
201: MEQGNTQPDI YMYNIVIDAL CKDGNLDAAI NILNEMKQKG IHPDILTYNS LIDGLCKLGQ WEKVKTLFSE MVNLNMYPDV RTFTILTDGL CKEGKVEDAE
301: EVMKHMVEKG VEPNVITYNV IMDGYCLRGQ LDRARRIFDI LIDKGIEPDI FSYNILINGY CKKKKLSKAM QLFREISKKG SKPNIVTYNT ILQGLFEVGR
401: IGVAKQLFVE MVSTGPVPNL SIYHTLLDGY FKYRLVEEAM SLFNKLEGKK ENIDITSYNI IINGLSKNGE LDKAHAIFQK LSSIGLLPDV RIYTTMITGF
501: CLQGLLDEAK DMLRKMEGNN CLPDNVTYNV IVQGYLRCRK INEMVTFMKE MTGRGFSFDT TTTELLVNAI SENPSVVDML PELHAEIKK
Best Arabidopsis Sequence Match ( AT1G12700.2 )
(BLAST)
001: MFVGYRAKTN NSAEEIMMIK RSITTNMKAL RLIQPHLLKT GSLRTDLLCT ISSFFSSCER DFSSISNGNV CFRERLRSGI VDIKKDDAIA LFQEMIRSRP
101: LPSLVDFSRF FSAIARTKQF NLVLDFCKQL ELNGIAHNIY TLNIMINCFC RCCKTCFAYS VLGKVMKLGY EPDTTTFNTL IKGLFLEGKV SEAVVLVDRM
201: VENGCQPDVV TYNSIVNGIC RSGDTSLALD LLRKMEERNV KADVFTYSTI IDSLCRDGCI DAAISLFKEM ETKGIKSSVV TYNSLVRGLC KAGKWNDGAL
301: LLKDMVSREI VPNVITFNVL LDVFVKEGKL QEANELYKEM ITRGISPNII TYNTLMDGYC MQNRLSEANN MLDLMVRNKC SPDIVTFTSL IKGYCMVKRV
401: DDGMKVFRNI SKRGLVANAV TYSILVQGFC QSGKIKLAEE LFQEMVSHGV LPDVMTYGIL LDGLCDNGKL EKALEIFEDL QKSKMDLGIV MYTTIIEGMC
501: KGGKVEDAWN LFCSLPCKGV KPNVMTYTVM ISGLCKKGSL SEANILLRKM EEDGNAPNDC TYNTLIRAHL RDGDLTASAK LIEEMKSCGF SADASSIKMV
601: IDMLLSGELD KSFLDMLS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.