Factsheet for HORVU1Hr1G011250.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.85	70.37
HORVU0Hr1G035310.1	Barley	cytosol	92.88	47.08
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.19	42.1
HORVU1Hr1G018190.2	Barley	cytosol	33.22	34.39
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	55.25	33.96
HORVU6Hr1G017870.2	Barley	mitochondrion	33.56	33.0
HORVU1Hr1G010970.1	Barley	mitochondrion	91.19	32.57
HORVU0Hr1G031920.1	Barley	plastid	92.88	31.86
HORVU1Hr1G011150.1	Barley	cytosol, plastid	94.24	31.48
HORVU1Hr1G011160.2	Barley	cytosol, plastid	93.56	30.84
HORVU1Hr1G011300.3	Barley	plastid	95.59	30.65
HORVU1Hr1G010890.5	Barley	cytosol	92.54	30.4
Bra027029.1-P	Field mustard	mitochondrion	22.03	26.75
Solyc06g007280.2.1	Tomato	cytosol	23.05	26.67
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	62.03	26.18
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	70.51	25.06
HORVU6Hr1G076780.7	Barley	mitochondrion	69.49	24.88
HORVU1Hr1G014040.1	Barley	mitochondrion	68.81	24.37
HORVU1Hr1G013810.1	Barley	plastid	69.15	24.31
KXG35774	Sorghum	cytosol, mitochondrion	38.98	24.31
HORVU1Hr1G004750.6	Barley	plastid	62.03	22.93
HORVU1Hr1G014060.1	Barley	plastid	66.78	22.13
PGSC0003DMT400052977	Potato	cytosol	28.14	21.34
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	54.92	21.15
Bra027636.1-P	Field mustard	cytosol	23.05	20.99
Os04t0349600-01	Rice	plastid	27.46	20.93
KRH40513	Soybean	plastid	24.41	20.51
HORVU6Hr1G014310.1	Barley	mitochondrion	47.12	20.23
Zm00001d007534_P001	Maize	plastid	52.2	19.82
KRH09082	Soybean	cytosol	27.12	19.61
VIT_12s0028g02320.t01	Wine grape	mitochondrion	31.53	19.5
KRH39054	Soybean	cytosol	32.54	19.32
Zm00001d007548_P001	Maize	plastid	52.2	18.92
KRH39074	Soybean	cytosol	31.86	18.91
Bra006187.1-P	Field mustard	plastid	18.64	18.9
Zm00001d007559_P001	Maize	plastid	52.2	18.85
Zm00001d007555_P001	Maize	plastid	51.86	18.8
Solyc06g005220.2.1	Tomato	cytosol	25.76	18.72
KRH39004	Soybean	cytosol	31.53	18.71
KRH39057	Soybean	cytosol	31.19	18.51
KRH39112	Soybean	cytosol	30.85	18.31
Zm00001d007531_P001	Maize	plastid	50.51	18.3
AT5G16640.1	Thale cress	mitochondrion	31.19	18.25
KRH39072	Soybean	cytosol	30.51	18.15
Bra026884.1-P	Field mustard	cytosol	28.14	18.08
Os04t0351333-00	Rice	cytosol	53.56	17.98
KXG28799	Sorghum	plastid	45.76	17.76
VIT_14s0081g00110.t01	Wine grape	cytosol	29.15	17.52
Bra036649.1-P	Field mustard	cytosol	23.05	17.39
HORVU6Hr1G002890.6	Barley	cytosol, plastid	46.78	17.36
KRH39066	Soybean	cytosol	32.54	17.3
PGSC0003DMT400008759	Potato	cytosol	17.97	16.61
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	27.8	16.24
AT3G16710.1	Thale cress	mitochondrion	27.8	16.17
Bra025516.1-P	Field mustard	cytosol, mitochondrion	26.1	16.14
KRH08636	Soybean	cytosol	28.47	16.09
KRH48615	Soybean	mitochondrion	29.49	15.96
KRH08639	Soybean	mitochondrion, plastid	30.51	15.93
KRH08607	Soybean	cytosol	29.83	15.69
KRH09084	Soybean	plastid	27.12	15.66
KRH41817	Soybean	mitochondrion	29.15	15.5
KRH39050	Soybean	mitochondrion	27.8	15.41
KRH17148	Soybean	mitochondrion	28.47	15.41
KRH09121	Soybean	mitochondrion	27.8	15.36
KRH08277	Soybean	plastid	29.49	15.34
KRH09154	Soybean	mitochondrion	28.81	15.29
KRH08671	Soybean	cytosol, mitochondrion	28.47	15.19
KRH25652	Soybean	cytosol, golgi	27.8	15.19
AT5G41170.1	Thale cress	mitochondrion	27.12	15.18
AT1G62680.2	Thale cress	plastid	27.8	14.96
Bra036651.1-P	Field mustard	mitochondrion	27.12	14.95
PGSC0003DMT400025087	Potato	endoplasmic reticulum	25.08	14.95
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	26.44	14.86
KRH08628	Soybean	plastid	27.8	14.86
VIT_14s0081g00120.t01	Wine grape	plastid	29.15	14.75
KRH40400	Soybean	plastid	28.81	14.73
Bra027026.1-P	Field mustard	mitochondrion	26.1	14.72
PGSC0003DMT400025067	Potato	cytosol	23.73	14.71
AT1G62720.1	Thale cress	mitochondrion	24.07	14.64
VIT_14s0030g02280.t01	Wine grape	plastid	27.8	14.62
Bra026882.1-P	Field mustard	cytosol	26.44	14.61
Bra021192.1-P	Field mustard	plastid	24.75	14.48
KRH08625	Soybean	plastid	28.14	14.41
AT1G63330.2	Thale cress	cytosol	27.12	14.31
AT1G62914.1	Thale cress	mitochondrion	25.42	14.2
Solyc06g007810.1.1	Tomato	cytosol	12.88	14.18
PGSC0003DMT400052971	Potato	mitochondrion	28.47	14.17
AT1G64580.1	Thale cress	mitochondrion	25.08	14.15
AT1G64583.1	Thale cress	mitochondrion	24.41	14.06
PGSC0003DMT400025074	Potato	cytosol	26.1	13.95
PGSC0003DMT400053556	Potato	mitochondrion	21.69	13.94
AT3G22470.1	Thale cress	cytosol, mitochondrion	29.15	13.89
PGSC0003DMT400008757	Potato	cytosol	23.39	13.86
AT1G06580.1	Thale cress	mitochondrion	23.39	13.8
VIT_14s0081g00270.t01	Wine grape	plastid	27.12	13.79
VIT_14s0081g00280.t01	Wine grape	mitochondrion	29.83	13.77
Solyc06g007300.1.1	Tomato	extracellular	27.46	13.68
KRH09095	Soybean	plastid	27.12	13.68
AT4G26800.2	Thale cress	mitochondrion, plastid	23.73	13.62
Solyc06g007740.1.1	Tomato	cytosol	27.12	13.56
KRH09097	Soybean	plastid	26.78	13.55
VIT_14s0030g02260.t01	Wine grape	cytosol	20.34	13.54
PGSC0003DMT400056665	Potato	mitochondrion	26.78	13.41
AT1G63400.1	Thale cress	cytosol, plastid	26.1	13.34
PGSC0003DMT400053185	Potato	mitochondrion	26.44	13.22
AT1G63080.3	Thale cress	mitochondrion	27.46	13.19
Bra031731.1-P	Field mustard	mitochondrion	22.71	13.19
Bra016762.1-P	Field mustard	mitochondrion	27.12	13.18
AT1G62670.1	Thale cress	mitochondrion	28.14	13.17
PGSC0003DMT400056663	Potato	plastid	26.1	13.1
Bra026401.1-P	Field mustard	plastid	23.73	13.08
Bra026954.1-P	Field mustard	mitochondrion	28.81	13.08
Bra026958.1-P	Field mustard	mitochondrion	28.14	13.03
PGSC0003DMT400008760	Potato	mitochondrion	25.76	12.97
Bra026957.1-P	Field mustard	mitochondrion	26.44	12.94
KRH08599	Soybean	cytosol, plastid	29.15	12.86
KRH31646	Soybean	cytosol	22.37	12.74
AT1G12300.1	Thale cress	mitochondrion	27.46	12.72
AT1G62910.1	Thale cress	mitochondrion	27.12	12.66
AT1G62590.1	Thale cress	mitochondrion	27.12	12.62
AT1G12775.1	Thale cress	cytosol, mitochondrion	27.46	12.58
AT1G12620.1	Thale cress	cytosol, mitochondrion	26.44	12.56
Bra026971.1-P	Field mustard	mitochondrion	26.78	12.56
PGSC0003DMT400053182	Potato	cytosol	25.42	12.52
AT1G12700.2	Thale cress	cytosol	26.1	12.46
Bra027658.1-P	Field mustard	cytosol, mitochondrion	22.71	12.34
AT1G63130.1	Thale cress	mitochondrion	26.1	12.22
AT1G62930.1	Thale cress	plastid	25.76	12.08
Bra026836.1-P	Field mustard	cytosol, mitochondrion	20.0	12.02
KRH12873	Soybean	cytosol	28.14	11.93
AT1G63070.1	Thale cress	mitochondrion	23.73	11.86
Bra028267.1-P	Field mustard	mitochondrion	25.08	11.82
PGSC0003DMT400015293	Potato	mitochondrion	24.07	11.64
PGSC0003DMT400015298	Potato	mitochondrion	24.07	11.64
Bra027726.1-P	Field mustard	mitochondrion	18.31	11.46
Solyc04g080120.1.1	Tomato	extracellular	23.73	11.44
AT1G63150.1	Thale cress	mitochondrion	24.07	11.29
KRH09085	Soybean	mitochondrion	26.78	11.22
AT1G64100.2	Thale cress	cytosol	27.12	9.93
KRH39064	Soybean	cytosol	32.2	9.8
Bra027656.1-P	Field mustard	cytosol	30.51	9.56
Bra016758.1-P	Field mustard	plastid	28.14	7.16
HORVU1Hr1G011400.44	Barley	plastid	12.88	6.17
CDX68679	Canola	cytosol	0.34	0.87

Protein Annotations

EnsemblPlants:HORVU1Hr1G011250.1	EnsemblPlantsGene:HORVU1Hr1G011250	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF874
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	TIGRFAMs:TIGR00756	UniParc:UPI000B468600	UniProt:A0A287EMB2
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:26852674..26853829

Molecular Weight (calculated)

32467.8 Da

IEP (calculated)

8.778

GRAVY (calculated)

0.016

Length

295 amino acids

Sequence
(BLAST)

001: MKRQGVVPSV GTYNLIIDAL CKARAMDKAE LVLRHMTTNG AQPNTVTYSC MIHGYATLGR LKEAAKMFRE MKKRGLIPDI VTCNSLMASL CKHGRSKEAA
101: QFFDSMTAKG HKPDIVSYCT LLHGYASEGC FADMIGLFNS MKSNGIAADC RVFTILIDAY AKRGMVDDAM LIFTEMQQQG VSPNVVTYST VISAFSRMGR
201: LTDAMEKFNQ MVARGIQPNT AVYRSIIQGF CKHGGLVKAK ELVSEMINKG IPRPDIVFFN SVINSLCKDG RVMDAHDIFD LVTDIGERPD VITFX

Best Arabidopsis Sequence Match ( AT1G63080.1 )
(BLAST)

001: MSLAKRFVHL RKASPSFCLR GIYFSGLSYD GYREKLSRNA LLHLKLDEAV DLFGEMVKSR PFPSIVEFSK LLSAIAKMKK FDLVISFGEK MEILGVSHNL
101: YTYNIMINCL CRRSQLSFAL AILGKMMKLG YGPSIVTLNS LLNGFCHGNR ISEAVALVDQ MVEMGYQPDT VTFTTLVHGL FQHNKASEAV ALVERMVVKG
201: CQPDLVTYGA VINGLCKRGE PDLALNLLNK MEKGKIEADV VIYSTVIDSL CKYRHVDDAL NLFTEMDNKG IRPDVFTYSS LISCLCNYGR WSDASRLLSD
301: MLERKINPNV VTFNSLIDAF AKEGKLIEAE KLFDEMIQRS IDPNIVTYNS LINGFCMHDR LDEAQQIFTL MVSKDCLPDV VTYNTLINGF CKAKKVVDGM
401: ELFRDMSRRG LVGNTVTYTT LIHGFFQASD CDNAQMVFKQ MVSDGVHPNI MTYNTLLDGL CKNGKLEKAM VVFEYLQKSK MEPDIYTYNI MSEGMCKAGK
501: VEDGWDLFCS LSLKGVKPDV IAYNTMISGF CKKGLKEEAY TLFIKMKEDG PLPDSGTYNT LIRAHLRDGD KAASAELIKE MRSCRFAGDA STYGLVTDML
601: HDGRLDKGFL EVLS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g63080, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.