Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G148100.1 | Wheat | nucleus | 78.81 | 80.35 |
| TraesCS4D01G153300.1 | Wheat | nucleus | 79.21 | 78.34 |
| TraesCS4A01G137900.1 | Wheat | nucleus | 74.47 | 75.46 |
| Os03t0596900-01 | Rice | nucleus | 38.55 | 54.34 |
| EER91265 | Sorghum | nucleus | 34.11 | 52.4 |
| Zm00001d013757_P010 | Maize | nucleus | 33.3 | 50.54 |
| Zm00001d033159_P001 | Maize | nucleus | 22.1 | 48.99 |
| GSMUA_Achr9P09240_001 | Banana | nucleus | 11.6 | 37.95 |
| GSMUA_Achr6P35030_001 | Banana | nucleus | 19.58 | 36.67 |
| GSMUA_Achr4P23560_001 | Banana | nucleus | 19.27 | 35.63 |
| PGSC0003DMT400037344 | Potato | endoplasmic reticulum, vacuole | 11.1 | 31.61 |
| Solyc10g006000.2.1 | Tomato | nucleus | 16.65 | 29.78 |
| VIT_19s0015g00430.t01 | Wine grape | nucleus | 17.76 | 29.38 |
| KRG98507 | Soybean | nucleus | 20.28 | 27.35 |
| KRH46360 | Soybean | nucleus | 20.18 | 27.03 |
| CDX94304 | Canola | nucleus | 11.91 | 27.0 |
| Solyc07g065490.2.1 | Tomato | nucleus | 16.85 | 26.34 |
| CDY06563 | Canola | nucleus | 18.16 | 26.2 |
| PGSC0003DMT400057390 | Potato | extracellular, nucleus | 17.56 | 25.48 |
| KRH46364 | Soybean | nucleus | 20.48 | 25.15 |
| CDY28645 | Canola | nucleus | 19.68 | 24.59 |
| AT4G26630.1 | Thale cress | nucleus | 18.57 | 24.12 |
| KRG98502 | Soybean | nucleus | 17.66 | 23.97 |
| AT5G55660.1 | Thale cress | nucleus | 18.77 | 23.91 |
| CDY20754 | Canola | nucleus | 18.87 | 23.55 |
| Bra027748.1-P | Field mustard | nucleus | 4.14 | 23.3 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 13.32 | 23.2 |
| CDY17352 | Canola | extracellular, vacuole | 19.37 | 23.19 |
| Bra035582.1-P | Field mustard | nucleus | 18.57 | 23.17 |
| Bra002880.1-P | Field mustard | endoplasmic reticulum | 20.18 | 23.12 |
| CDX89318 | Canola | nucleus | 16.15 | 22.73 |
| Bra026415.1-P | Field mustard | nucleus | 18.57 | 22.04 |
| CDX97358 | Canola | nucleus | 19.27 | 15.75 |
| Bra010432.1-P | Field mustard | nucleus | 17.36 | 15.21 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G035250.1 | EnsemblPlantsGene:HORVU4Hr1G035250 | Gene3D:1.10.10.60 | InterPro:DEK_C | ncoils:Coil | PANTHER:PTHR13468 |
| PANTHER:PTHR13468:SF8 | PFAM:PF08766 | SEG:seg | SUPFAM:SSF109715 | UniParc:UPI000B466CA5 | UniProt:A0A287NSR3 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:258977638..258985738
Molecular Weight (calculated)
108601.0 Da
IEP (calculated)
4.952
GRAVY (calculated)
-1.132
Length
991 amino acids
Sequence
(BLAST)
(BLAST)
001: ENKLTTFLLS LSSWRKPGGD GGDATRRDAT PHSSARITAL LQLLTYLTLR TWPNYFSAAG AIRVTRMTGA DLAPVMELMA VANGGTSTDV VASDKKDNTK
101: MEEAGKSKDV AVANTNANQQ NKASENDTEG SSHDDAKMEE AQDAKEDDVG AVKQAGLEDV ISGAADNTDA KEGNGANAAE HEDSKTAAIE DVVAKEDDNT
201: KSAEHKDFKM VIVEDTDAKE DDKAKAAEHE DSKTAGIEDV AAKEDANTKS AEHKDSKMVI LEDADAMEDE KAKAAEHDDH RTGGVAAEHK DHRTGGVEDA
301: DANEYNGARA EECKDAKMNS VDNADMKEDE DANAAEHEDA KMVDVDAADS KEDNGTKVVE HEDVKMGTVE DIDAKEDNNA KAAEHEDIIM GVVEHADVKE
401: DNSSNIAGRE HVKMTEAETK PGDAVLEDKG HTEEKDVNTE VKKGLKDAEQ CGSEMQDELN GKGNNGAARQ QENKAEEMSD DDSQGEEEVE EKGSSVKKEE
501: GEDGKANENE EKLEKESAKK EGKDGKVTEE EVGEADKNVE ENKEETPKNK RARSARDRRQ GQDKKQHGSK SREAKSLLNT PSPYGIDRPQ RERKIVERLV
601: EVIDKEPNRN FVVEKGRGTP LKDIPSVAQR LTRKKPADLK FLHNVLFGRK GKTVDFKGHI LQFSGFVWHE SDEKQRAKAK EKLDKCMKDM LVDLCWLLAI
701: PVPKTNIRKE DIVAKLLDFI AEPHVMPDSG LSDDQGSNYR KRKRGGGSSS KTSDITPKRS KKKFADHISP RQKQALEYDT DEDVKSGSEE DADESPDEQE
801: DGYDSAEEKA SRKSSEVKDS AGKKKAAAGS THRTSPPRTA SKTAGKTSPS KGSKEKESLD ESAKVFSRKK KPIISKRTPS SEKVIEENKS SGKEAMKSKG
901: ESAEGGLPSK AELKKTIIGI LKKVDFNTST FSDILKKLDD HYKIDLTSKK GAIKIMIQEE LTKLSEQEDD DQDKSVDAKK KQSRHRAKVT G
101: MEEAGKSKDV AVANTNANQQ NKASENDTEG SSHDDAKMEE AQDAKEDDVG AVKQAGLEDV ISGAADNTDA KEGNGANAAE HEDSKTAAIE DVVAKEDDNT
201: KSAEHKDFKM VIVEDTDAKE DDKAKAAEHE DSKTAGIEDV AAKEDANTKS AEHKDSKMVI LEDADAMEDE KAKAAEHDDH RTGGVAAEHK DHRTGGVEDA
301: DANEYNGARA EECKDAKMNS VDNADMKEDE DANAAEHEDA KMVDVDAADS KEDNGTKVVE HEDVKMGTVE DIDAKEDNNA KAAEHEDIIM GVVEHADVKE
401: DNSSNIAGRE HVKMTEAETK PGDAVLEDKG HTEEKDVNTE VKKGLKDAEQ CGSEMQDELN GKGNNGAARQ QENKAEEMSD DDSQGEEEVE EKGSSVKKEE
501: GEDGKANENE EKLEKESAKK EGKDGKVTEE EVGEADKNVE ENKEETPKNK RARSARDRRQ GQDKKQHGSK SREAKSLLNT PSPYGIDRPQ RERKIVERLV
601: EVIDKEPNRN FVVEKGRGTP LKDIPSVAQR LTRKKPADLK FLHNVLFGRK GKTVDFKGHI LQFSGFVWHE SDEKQRAKAK EKLDKCMKDM LVDLCWLLAI
701: PVPKTNIRKE DIVAKLLDFI AEPHVMPDSG LSDDQGSNYR KRKRGGGSSS KTSDITPKRS KKKFADHISP RQKQALEYDT DEDVKSGSEE DADESPDEQE
801: DGYDSAEEKA SRKSSEVKDS AGKKKAAAGS THRTSPPRTA SKTAGKTSPS KGSKEKESLD ESAKVFSRKK KPIISKRTPS SEKVIEENKS SGKEAMKSKG
901: ESAEGGLPSK AELKKTIIGI LKKVDFNTST FSDILKKLDD HYKIDLTSKK GAIKIMIQEE LTKLSEQEDD DQDKSVDAKK KQSRHRAKVT G
001: MGEEDTKVIV EPTANGTSSL QKTSDAISGK EVQENASGKE VQESKKEEDT GLEKMEIDDE GKQHEGESET GDKEVEVTEE EKKDVGEDKE QPEADKMDED
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:F4K4Y5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.