Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G270200.1 | Wheat | plastid | 74.56 | 89.38 |
| TraesCS3B01G304200.1 | Wheat | plastid | 74.24 | 89.34 |
| TraesCS3A01G270400.1 | Wheat | plastid | 78.42 | 77.42 |
| Os01t0675000-01 | Rice | mitochondrion | 64.09 | 71.84 |
| KXG33101 | Sorghum | mitochondrion | 60.06 | 66.73 |
| Zm00001d043889_P001 | Maize | mitochondrion | 59.9 | 61.49 |
| HORVU3Hr1G073200.1 | Barley | nucleus | 42.19 | 55.04 |
| HORVU6Hr1G050860.4 | Barley | mitochondrion | 43.32 | 53.48 |
| CDY45633 | Canola | nucleus | 41.55 | 49.33 |
| Bra021162.1-P | Field mustard | nucleus | 34.46 | 49.31 |
| Bra018956.1-P | Field mustard | nucleus | 42.35 | 49.07 |
| AT1G52240.1 | Thale cress | nucleus | 42.51 | 48.62 |
| Bra030396.1-P | Field mustard | nucleus | 41.87 | 48.42 |
| CDX87879 | Canola | nucleus | 42.03 | 46.86 |
| HORVU1Hr1G086590.2 | Barley | plastid | 49.76 | 45.85 |
| Bra027189.1-P | Field mustard | nucleus | 38.33 | 44.91 |
| CDX97723 | Canola | nucleus | 38.33 | 44.74 |
| CDY52982 | Canola | nucleus | 42.67 | 44.09 |
| CDY67259 | Canola | nucleus | 42.67 | 44.09 |
| CDY30136 | Canola | nucleus | 38.65 | 43.64 |
| AT3G16130.1 | Thale cress | nucleus | 37.04 | 42.75 |
| CDY28381 | Canola | nucleus | 39.29 | 40.73 |
| CDY20181 | Canola | nucleus | 38.81 | 39.7 |
| HORVU6Hr1G092860.2 | Barley | nucleus | 28.99 | 39.39 |
| HORVU1Hr1G053350.4 | Barley | nucleus, plastid | 29.15 | 37.87 |
| HORVU5Hr1G085510.1 | Barley | nucleus, plastid | 32.85 | 36.04 |
| HORVU2Hr1G096430.13 | Barley | mitochondrion | 30.76 | 35.97 |
| HORVU1Hr1G072910.3 | Barley | cytosol | 31.72 | 34.93 |
| HORVU3Hr1G085680.2 | Barley | plastid | 33.49 | 31.85 |
| HORVU6Hr1G068660.4 | Barley | nucleus | 24.48 | 25.12 |
| HORVU6Hr1G041610.18 | Barley | plastid | 25.76 | 21.33 |
| Bra021161.1-P | Field mustard | nucleus | 2.9 | 13.53 |
Protein Annotations
| Gene3D:1.20.58.1310 | Gene3D:1.20.58.2010 | MapMan:27.4.3.1 | UniProt:A0A287LAH3 | GO:GO:0003674 | GO:GO:0005085 |
| GO:GO:0005089 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0065009 | EnsemblPlantsGene:HORVU3Hr1G062030 |
| EnsemblPlants:HORVU3Hr1G062030.1 | InterPro:IPR005512 | PFAM:PF03759 | InterPro:PRONE_dom | PFscan:PS51334 | PANTHER:PTHR33101 |
| PANTHER:PTHR33101:SF10 | InterPro:RopGEF | UniParc:UPI000B479207 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:+:473170069..473175032
Molecular Weight (calculated)
69174.2 Da
IEP (calculated)
9.895
GRAVY (calculated)
-0.594
Length
621 amino acids
Sequence
(BLAST)
(BLAST)
001: KPPIATREGS QPSHTRAGTP ESVVRRGRGH TQGRNTIQGL PPHARRRSGR RPPQKPNPPS NTSVRAPVER AFSIPPATSA SIRPELVMVR RFLGRGQSLD
101: RFLPGRRVMT SSPSFSSSSA SLRSSSSLSS QCSTSGRGSM AEEQEAVVAP LPPVRKRVLS RSHGSRSAPV RQLPPKNVGR DAGPPSEMDL KKERFAKLLL
201: GEDMSGTGKG VSSALALSNS ITNLAASVFG EQRRLEPMSA DRRARWKKEI DWLLSVTDHI VEFVPLEQVS EDGTSMEVMG TQLRRDILMN IPALQKLDAM
301: LLGYLDSFKE EQEFWYVWKD ANEKEKGDAP RDGEKWWIPT VRVPPEGLSD QSRKWLQHQK DLVGQVLKAA MAINADVLGE MEIPEEYIED LPKNGRESLG
401: DSIYRTITDD YFDPNGLLDS IDLSTEHKIV DLKDRIEASV VIWQRKLCNK LSWGPGVSLE KREQFGERAE TVLLILKHKF PGSAQSSLDI SKIQYNKDVG
501: FAILESYSRA LESLAFAVLS RIEDVLYADT VARDPRRSKS RRRPSIEDDS PKSLVADDVE ATSARSNDSF CWQELEDRTL DSSGGKLKKI PRIGTRKFMH
601: VDKVEMSVCS VGGGLRSFSH R
101: RFLPGRRVMT SSPSFSSSSA SLRSSSSLSS QCSTSGRGSM AEEQEAVVAP LPPVRKRVLS RSHGSRSAPV RQLPPKNVGR DAGPPSEMDL KKERFAKLLL
201: GEDMSGTGKG VSSALALSNS ITNLAASVFG EQRRLEPMSA DRRARWKKEI DWLLSVTDHI VEFVPLEQVS EDGTSMEVMG TQLRRDILMN IPALQKLDAM
301: LLGYLDSFKE EQEFWYVWKD ANEKEKGDAP RDGEKWWIPT VRVPPEGLSD QSRKWLQHQK DLVGQVLKAA MAINADVLGE MEIPEEYIED LPKNGRESLG
401: DSIYRTITDD YFDPNGLLDS IDLSTEHKIV DLKDRIEASV VIWQRKLCNK LSWGPGVSLE KREQFGERAE TVLLILKHKF PGSAQSSLDI SKIQYNKDVG
501: FAILESYSRA LESLAFAVLS RIEDVLYADT VARDPRRSKS RRRPSIEDDS PKSLVADDVE ATSARSNDSF CWQELEDRTL DSSGGKLKKI PRIGTRKFMH
601: VDKVEMSVCS VGGGLRSFSH R
001: MVKAMEQEQE TYKSRLFHFK NMNENSASRH VKSWSSDCAM RMDGSDNLDD DDNDMMMFRS QPGKCGSVDR PSLPIGGVTP NRNDKLPRVS SSDSMEALII
101: LQAAMEQMKE KFSKLLLGED MSGGGKGVSS ALALSNAITN LAASAFGEQR RLEPMAVDRK TRWRREIGWL ISVADYIVEF APTQQTNKDG TSMEVMSTRQ
201: RTDLLCNIPA LKKLDAMLLD CLDKFKDQDE FYYVKKDSPD SCETRNDEKW WLPAVKVPPN GLSEISRRFL QSQKECVNQV LKAAMAINAQ VLSEMEIPES
301: YLESLPKNGR ASLGDVIYRM ITVEMFDADQ FLIEMDLSSE HKILDLKNRI EASIVIWKRK MVQKDTKSPW GSTVSIEKRE QFEERAETIL LLLKQGFPGI
401: SQSSLDISKI QFNRDVGLAI LESYSRVLES LAHTVMSRIE DVLYADQLTQ EPTNNAPSKN RYSLKENEKL REERLSFTED MASGTLSDVM QWGNKNNEMK
501: KESFFGDREK PLLSKVTGIM TNNKKSSYLD NLGAMRSPTA RYS
101: LQAAMEQMKE KFSKLLLGED MSGGGKGVSS ALALSNAITN LAASAFGEQR RLEPMAVDRK TRWRREIGWL ISVADYIVEF APTQQTNKDG TSMEVMSTRQ
201: RTDLLCNIPA LKKLDAMLLD CLDKFKDQDE FYYVKKDSPD SCETRNDEKW WLPAVKVPPN GLSEISRRFL QSQKECVNQV LKAAMAINAQ VLSEMEIPES
301: YLESLPKNGR ASLGDVIYRM ITVEMFDADQ FLIEMDLSSE HKILDLKNRI EASIVIWKRK MVQKDTKSPW GSTVSIEKRE QFEERAETIL LLLKQGFPGI
401: SQSSLDISKI QFNRDVGLAI LESYSRVLES LAHTVMSRIE DVLYADQLTQ EPTNNAPSKN RYSLKENEKL REERLSFTED MASGTLSDVM QWGNKNNEMK
501: KESFFGDREK PLLSKVTGIM TNNKKSSYLD NLGAMRSPTA RYS
Arabidopsis Description
ROPGEF11ROPGEF11 [Source:UniProtKB/TrEMBL;Acc:A0A178W8V0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.