Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G270200.1 | Wheat | plastid | 77.9 | 94.59 |
| TraesCS3B01G304200.1 | Wheat | plastid | 77.27 | 94.19 |
| HORVU3Hr1G062030.1 | Barley | nucleus, plastid | 77.42 | 78.42 |
| Os01t0675000-01 | Rice | mitochondrion | 61.21 | 69.49 |
| KXG33101 | Sorghum | mitochondrion | 55.96 | 62.97 |
| TraesCS6A01G196000.1 | Wheat | cytosol | 41.65 | 60.09 |
| Zm00001d043889_P001 | Maize | mitochondrion | 56.28 | 58.51 |
| TraesCS3A01G305500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 39.43 | 52.77 |
| TraesCS1A01G392100.1 | Wheat | plastid | 45.15 | 50.62 |
| Bra021162.1-P | Field mustard | nucleus | 34.5 | 50.0 |
| CDY45633 | Canola | nucleus | 41.34 | 49.71 |
| Bra018956.1-P | Field mustard | nucleus | 42.13 | 49.44 |
| Bra030396.1-P | Field mustard | nucleus | 41.49 | 48.6 |
| AT1G52240.1 | Thale cress | nucleus | 41.81 | 48.43 |
| CDX87879 | Canola | nucleus | 41.49 | 46.86 |
| Bra027189.1-P | Field mustard | nucleus | 38.63 | 45.85 |
| CDX97723 | Canola | nucleus | 38.63 | 45.68 |
| CDY30136 | Canola | nucleus | 38.95 | 44.55 |
| CDY67259 | Canola | nucleus | 42.29 | 44.26 |
| CDY52982 | Canola | nucleus | 42.29 | 44.26 |
| AT3G16130.1 | Thale cress | nucleus | 37.2 | 43.49 |
| CDY28381 | Canola | nucleus | 39.43 | 41.4 |
| CDY20181 | Canola | nucleus | 38.95 | 40.36 |
| TraesCS5A01G340900.1 | Wheat | cytosol | 30.37 | 39.96 |
| TraesCS2A01G408100.1 | Wheat | cytosol | 28.93 | 38.89 |
| TraesCS1A01G208700.1 | Wheat | nucleus | 28.78 | 37.95 |
| TraesCS6A01G405000.1 | Wheat | nucleus | 27.34 | 37.64 |
| TraesCS3A01G364400.1 | Wheat | nucleus | 31.8 | 36.97 |
| TraesCS1A01G280900.2 | Wheat | cytosol | 30.84 | 32.94 |
| TraesCS6A01G270900.1 | Wheat | cytosol | 25.91 | 30.02 |
| Bra021161.1-P | Field mustard | nucleus | 3.02 | 14.29 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G270400.1 | EnsemblPlantsGene:TraesCS3A01G270400 | Gene3D:1.20.58.1310 | Gene3D:1.20.58.2010 | GO:GO:0003674 | GO:GO:0005089 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR005512 | InterPro:PRONE_dom | InterPro:RopGEF | PANTHER:PTHR33101 |
| PANTHER:PTHR33101:SF10 | PFAM:PF03759 | PFscan:PS51334 | SEG:seg | MapMan:27.4.3.1 | : |
Description
No Description!
Coordinates
chr3A:-:497649486..497652149
Molecular Weight (calculated)
69869.0 Da
IEP (calculated)
9.756
GRAVY (calculated)
-0.633
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSLARSPTK PRPPPRREKA ANQPHSRAHA SAGRTSGERP HTRSQHHPRP SPACTPAKRP ASSSKTKPPV EHKRPCTSRA AQLPSYLRAS ISPHPEQSLD
101: GFLPSCRVMT FSPSLSSSFS SSSSRLLRSS SSSLSSQCST SGRRSMDEEA EAVVPPLPPM PKLSRSHGSR AARGRHLELP PKNAARDVGP PSEMDLMKER
201: FAKLLLGEDM SGTGKGVSSA LALSNSITNL AASVFGEQRR LEPMSADRKA RWKKEIGWLL SVTDHIVEFV PLQQVSEDGT SMEVMGTQLR RDILMNIPAL
301: RKLDAMLLGY LDNFKDEQEY WYVSKNANES EKGDAPRDGE KWWIPTVRVP PEGLSDQSRK WLQHQKDIVG QVLKAAMAIN ANVLAQMEIP EEYIEALPKN
401: GRESLGDSIY RTITDDYFDP NGLMDSVDLS TEHKIVDLKD RIEASVVIWQ RKLCNKLSWG PGISLEKREQ FEERAQTVLL ILKHKFPGSG QSSLEISKIQ
501: YNKDVGFAIL ESYSRALESL AFAVLSRIED VLYADTIARD PRRLKSRRRP SLEDDSTESL AVDATEATSA KSSDSFCWQE LEDRSLDSGS GKLKKIPRIG
601: RRKSMHVEKV EMNVNVCGAG AGSRSFSHR
101: GFLPSCRVMT FSPSLSSSFS SSSSRLLRSS SSSLSSQCST SGRRSMDEEA EAVVPPLPPM PKLSRSHGSR AARGRHLELP PKNAARDVGP PSEMDLMKER
201: FAKLLLGEDM SGTGKGVSSA LALSNSITNL AASVFGEQRR LEPMSADRKA RWKKEIGWLL SVTDHIVEFV PLQQVSEDGT SMEVMGTQLR RDILMNIPAL
301: RKLDAMLLGY LDNFKDEQEY WYVSKNANES EKGDAPRDGE KWWIPTVRVP PEGLSDQSRK WLQHQKDIVG QVLKAAMAIN ANVLAQMEIP EEYIEALPKN
401: GRESLGDSIY RTITDDYFDP NGLMDSVDLS TEHKIVDLKD RIEASVVIWQ RKLCNKLSWG PGISLEKREQ FEERAQTVLL ILKHKFPGSG QSSLEISKIQ
501: YNKDVGFAIL ESYSRALESL AFAVLSRIED VLYADTIARD PRRLKSRRRP SLEDDSTESL AVDATEATSA KSSDSFCWQE LEDRSLDSGS GKLKKIPRIG
601: RRKSMHVEKV EMNVNVCGAG AGSRSFSHR
001: MVKAMEQEQE TYKSRLFHFK NMNENSASRH VKSWSSDCAM RMDGSDNLDD DDNDMMMFRS QPGKCGSVDR PSLPIGGVTP NRNDKLPRVS SSDSMEALII
101: LQAAMEQMKE KFSKLLLGED MSGGGKGVSS ALALSNAITN LAASAFGEQR RLEPMAVDRK TRWRREIGWL ISVADYIVEF APTQQTNKDG TSMEVMSTRQ
201: RTDLLCNIPA LKKLDAMLLD CLDKFKDQDE FYYVKKDSPD SCETRNDEKW WLPAVKVPPN GLSEISRRFL QSQKECVNQV LKAAMAINAQ VLSEMEIPES
301: YLESLPKNGR ASLGDVIYRM ITVEMFDADQ FLIEMDLSSE HKILDLKNRI EASIVIWKRK MVQKDTKSPW GSTVSIEKRE QFEERAETIL LLLKQGFPGI
401: SQSSLDISKI QFNRDVGLAI LESYSRVLES LAHTVMSRIE DVLYADQLTQ EPTNNAPSKN RYSLKENEKL REERLSFTED MASGTLSDVM QWGNKNNEMK
501: KESFFGDREK PLLSKVTGIM TNNKKSSYLD NLGAMRSPTA RYS
101: LQAAMEQMKE KFSKLLLGED MSGGGKGVSS ALALSNAITN LAASAFGEQR RLEPMAVDRK TRWRREIGWL ISVADYIVEF APTQQTNKDG TSMEVMSTRQ
201: RTDLLCNIPA LKKLDAMLLD CLDKFKDQDE FYYVKKDSPD SCETRNDEKW WLPAVKVPPN GLSEISRRFL QSQKECVNQV LKAAMAINAQ VLSEMEIPES
301: YLESLPKNGR ASLGDVIYRM ITVEMFDADQ FLIEMDLSSE HKILDLKNRI EASIVIWKRK MVQKDTKSPW GSTVSIEKRE QFEERAETIL LLLKQGFPGI
401: SQSSLDISKI QFNRDVGLAI LESYSRVLES LAHTVMSRIE DVLYADQLTQ EPTNNAPSKN RYSLKENEKL REERLSFTED MASGTLSDVM QWGNKNNEMK
501: KESFFGDREK PLLSKVTGIM TNNKKSSYLD NLGAMRSPTA RYS
Arabidopsis Description
ROPGEF11ROPGEF11 [Source:UniProtKB/TrEMBL;Acc:A0A178W8V0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.