Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G107330.1 | Barley | nucleus | 79.61 | 83.25 |
| TraesCS3B01G540900.1 | Wheat | cytosol | 82.04 | 80.86 |
| TraesCS7D01G049900.2 | Wheat | nucleus | 68.93 | 73.58 |
| TraesCS3D01G486000.1 | Wheat | nucleus | 58.25 | 65.93 |
| Os01t0950800-01 | Rice | nucleus | 60.19 | 59.05 |
| EES04224 | Sorghum | nucleus | 57.28 | 55.66 |
| Zm00001d011873_P001 | Maize | nucleus | 56.31 | 53.95 |
| Os10t0580500-00 | Rice | mitochondrion | 49.03 | 44.89 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 53.4 | 32.45 |
| PGSC0003DMT400059770 | Potato | nucleus | 28.16 | 32.04 |
| KRH24407 | Soybean | nucleus | 30.1 | 29.11 |
| Solyc01g068450.2.1 | Tomato | nucleus | 27.67 | 28.22 |
| AT3G15750.1 | Thale cress | nucleus | 26.7 | 27.64 |
| CDY12037 | Canola | nucleus | 27.18 | 27.59 |
| CDY03143 | Canola | nucleus | 27.18 | 27.59 |
| AT1G34570.1 | Thale cress | nucleus | 26.7 | 26.44 |
| Bra028059.1-P | Field mustard | cytosol | 27.18 | 24.45 |
| KRH29386 | Soybean | nucleus | 28.64 | 22.1 |
| Bra036754.1-P | Field mustard | nucleus | 28.16 | 20.28 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G485500.1 | EnsemblPlantsGene:TraesCS3D01G485500 | InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 | PFAM:PF09811 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:582027403..582028400
Molecular Weight (calculated)
22799.6 Da
IEP (calculated)
4.897
GRAVY (calculated)
-0.663
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQVQIGFVM AGSEGVRGLA ASVGELHMEA SPSREEGTNG HGNGDAAAVD DDVWGDASDS PGHDSDLKRE WEHRQEQFHK MGYRDGITEG QKDVAQEGFN
101: LGHRQSADVA FKWGLVRGIT SALASLPDRL KEKLLLDAQR RGKLEDLHNS VQEISAQGAL QLFHESTLQD NRRPEESKIQ TIPKDLLLLL QECPDVHVSE
201: ELKRVP
101: LGHRQSADVA FKWGLVRGIT SALASLPDRL KEKLLLDAQR RGKLEDLHNS VQEISAQGAL QLFHESTLQD NRRPEESKIQ TIPKDLLLLL QECPDVHVSE
201: ELKRVP
001: MEPPEDGKVN FAKELYGESL QISKLSNKDH GLENLDDPFY GSSDEDYSEA RVLDNENEQR RVKFHSAGYR DGIVVGKEAI AQEGYNFGYK ESVLAGYKFG
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:F4HV08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.