Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g068450.2.1 | Tomato | nucleus | 70.17 | 62.87 |
| KRH24407 | Soybean | nucleus | 40.88 | 34.74 |
| Os01t0950800-01 | Rice | nucleus | 35.91 | 30.95 |
| TraesCS7A01G054800.2 | Wheat | cytosol, mitochondrion, nucleus | 32.04 | 29.9 |
| EES04224 | Sorghum | nucleus | 34.25 | 29.25 |
| TraesCS3D01G486000.1 | Wheat | nucleus | 29.28 | 29.12 |
| CDY03143 | Canola | nucleus | 32.6 | 29.06 |
| TraesCS7D01G049900.2 | Wheat | nucleus | 30.94 | 29.02 |
| HORVU3Hr1G107330.1 | Barley | nucleus | 31.49 | 28.93 |
| CDY12037 | Canola | nucleus | 32.04 | 28.57 |
| TraesCS3B01G540900.1 | Wheat | cytosol | 32.6 | 28.23 |
| TraesCS3D01G485500.1 | Wheat | cytosol | 32.04 | 28.16 |
| KRH29386 | Soybean | nucleus | 41.44 | 28.09 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 30.94 | 28.0 |
| Zm00001d011873_P001 | Maize | nucleus | 33.15 | 27.91 |
| Os10t0580500-00 | Rice | mitochondrion | 34.25 | 27.56 |
| AT3G15750.1 | Thale cress | nucleus | 29.83 | 27.14 |
| TraesCS3B01G540300.1 | Wheat | nucleus | 26.52 | 26.67 |
| AT1G34570.1 | Thale cress | nucleus | 30.39 | 26.44 |
| Bra028059.1-P | Field mustard | cytosol | 32.6 | 25.76 |
| Bra036754.1-P | Field mustard | nucleus | 29.28 | 18.53 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 33.15 | 17.7 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400059770 | EnsemblPlantsGene:PGSC0003DMG400023243 | InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 | PFAM:PF09811 |
| PGSC:PGSC0003DMG400023243 | UniParc:UPI0002956C99 | UniProt:M1C4Q4 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400023243]
Coordinates
chr7:-:16228917..16230217
Molecular Weight (calculated)
20592.5 Da
IEP (calculated)
4.527
GRAVY (calculated)
-0.820
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSIKDELY SDIFDMSNLQ SSLRSTTNSG NNDSHDNEWC DVWSDDGDLC HDSTDTLDKT SEMDREWQRW HDQFHTVSLQ VGYRDGLMAG KEASVQEGFN
101: VGFTDSVYVG YNWGLVRGIT SALASLPGGL KERMVNTKEI QNKFQHLHES VQSHSTVEML KVFHDNLTKK SEESAKNDNF N
101: VGFTDSVYVG YNWGLVRGIT SALASLPGGL KERMVNTKEI QNKFQHLHES VQSHSTVEML KVFHDNLTKK SEESAKNDNF N
001: MEKVYSFRSM NLDDPFYGSS DEEDYSEARV LGNENKQRRV KFHSAGYRDG IVAGKEAIAQ EGYNFGYKES VLNGYQFGLV RGVSSALAFL PDELREKLID
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:Q9LW04]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.