Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G486000.1 | Wheat | nucleus | 85.0 | 84.07 |
| TraesCS7A01G054800.2 | Wheat | cytosol, mitochondrion, nucleus | 67.78 | 62.89 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 66.11 | 59.5 |
| TraesCS3B01G540900.1 | Wheat | cytosol | 64.44 | 55.5 |
| Os01t0950800-01 | Rice | nucleus | 56.67 | 48.57 |
| Zm00001d011873_P001 | Maize | nucleus | 55.56 | 46.51 |
| EES04224 | Sorghum | nucleus | 53.89 | 45.75 |
| Os10t0580500-00 | Rice | mitochondrion | 48.33 | 38.67 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 55.56 | 29.5 |
| KRH24407 | Soybean | nucleus | 31.67 | 26.76 |
| Solyc01g068450.2.1 | Tomato | nucleus | 30.0 | 26.73 |
| PGSC0003DMT400059770 | Potato | nucleus | 26.67 | 26.52 |
| CDY03143 | Canola | nucleus | 28.89 | 25.62 |
| CDY12037 | Canola | nucleus | 27.78 | 24.63 |
| AT3G15750.1 | Thale cress | nucleus | 27.22 | 24.62 |
| AT1G34570.1 | Thale cress | nucleus | 26.11 | 22.6 |
| Bra028059.1-P | Field mustard | cytosol | 27.22 | 21.4 |
| KRH29386 | Soybean | nucleus | 31.11 | 20.97 |
| Bra036754.1-P | Field mustard | nucleus | 28.33 | 17.83 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G540300.1 | EnsemblPlantsGene:TraesCS3B01G540300 | InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 | PFAM:PF09811 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:779362492..779363383
Molecular Weight (calculated)
19940.3 Da
IEP (calculated)
4.817
GRAVY (calculated)
-0.696
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPPSREEG TYCHGNGGDA AADDDSSWCD YSDSPGHGSS LHMEWAHLQD QLHKMGYREG ITEGRKDAAQ EGFNLGHRQS APQGYKWGLV RGITSALASV
101: QDSLKEKLLL DAQRRGKLED LRNSVREIPP EAALRMFHES IIQDNAPLVE SSLQAIPNDL LLLLRECPDV QVPEELKRAP
101: QDSLKEKLLL DAQRRGKLED LRNSVREIPP EAALRMFHES IIQDNAPLVE SSLQAIPNDL LLLLRECPDV QVPEELKRAP
001: MEKVYSFRSM NLDDPFYGSS DEEDYSEARV LGNENKQRRV KFHSAGYRDG IVAGKEAIAQ EGYNFGYKES VLNGYQFGLV RGVSSALAFL PDELREKLID
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:Q9LW04]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.