Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G34570.1 | Thale cress | nucleus | 85.93 | 82.21 |
| CDY03143 | Canola | nucleus | 65.33 | 64.04 |
| CDY12037 | Canola | nucleus | 64.82 | 63.55 |
| Bra028059.1-P | Field mustard | cytosol | 64.32 | 55.9 |
| Bra036754.1-P | Field mustard | nucleus | 64.82 | 45.1 |
| KRH24407 | Soybean | nucleus | 37.69 | 35.21 |
| HORVU3Hr1G107330.1 | Barley | nucleus | 30.65 | 30.96 |
| PGSC0003DMT400059770 | Potato | nucleus | 27.14 | 29.83 |
| Solyc01g068450.2.1 | Tomato | nucleus | 30.15 | 29.7 |
| EES04224 | Sorghum | nucleus | 31.16 | 29.25 |
| KRH29386 | Soybean | nucleus | 39.2 | 29.21 |
| Os01t0950800-01 | Rice | nucleus | 30.15 | 28.57 |
| TraesCS7D01G049900.2 | Wheat | nucleus | 27.14 | 27.98 |
| TraesCS3D01G486000.1 | Wheat | nucleus | 25.13 | 27.47 |
| Zm00001d011873_P001 | Maize | nucleus | 29.65 | 27.44 |
| TraesCS3B01G540900.1 | Wheat | cytosol | 28.64 | 27.27 |
| TraesCS3B01G540300.1 | Wheat | nucleus | 24.62 | 27.22 |
| TraesCS3D01G485500.1 | Wheat | cytosol | 27.64 | 26.7 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 26.63 | 26.5 |
| TraesCS7A01G054800.2 | Wheat | cytosol, mitochondrion, nucleus | 25.63 | 26.29 |
| Os10t0580500-00 | Rice | mitochondrion | 25.63 | 22.67 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 29.15 | 17.11 |
Protein Annotations
| MapMan:35.2 | EntrezGene:820818 | ProteinID:AEE75722.1 | ArrayExpress:AT3G15750 | EnsemblPlantsGene:AT3G15750 | RefSeq:AT3G15750 |
| TAIR:AT3G15750 | RefSeq:AT3G15750-TAIR-G | EnsemblPlants:AT3G15750.1 | TAIR:AT3G15750.1 | Unigene:At.49387 | ProteinID:BAB02306.1 |
| InterPro:Essential_protein_Yae1_N | GO:GO:0005575 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0042273 | RefSeq:NP_188196.2 | PFAM:PF09811 |
| PO:PO:0000293 | PANTHER:PTHR18829 | UniProt:Q9LW04 | UniParc:UPI000009FC46 | InterPro:Yae1-like | SEG:seg |
Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:Q9LW04]
Coordinates
chr3:+:5335078..5336476
Molecular Weight (calculated)
22093.4 Da
IEP (calculated)
4.592
GRAVY (calculated)
-0.768
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPHEDVKDN LAKELYGESV QLSKHDDPFY GSSDEEDYSE ARVLGNENKQ RRVKFHSAGY RDGIVAGKEA IAQEGYNFGY KESVLNGYQF GLVRGVSSAL
101: AFLPDELREK LIDKQETREK FQKLHSSVHA LSTEVAMKRF YETLTTKQGE EKSGEEGPDS CSDSGSGSGV NVTTDLGSYV TELSSLLDKS PTIEVKFDT
101: AFLPDELREK LIDKQETREK FQKLHSSVHA LSTEVAMKRF YETLTTKQGE EKSGEEGPDS CSDSGSGSGV NVTTDLGSYV TELSSLLDKS PTIEVKFDT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.