Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12037 | Canola | nucleus | 83.41 | 94.09 |
| AT1G34570.1 | Thale cress | nucleus | 59.83 | 65.87 |
| AT3G15750.1 | Thale cress | nucleus | 55.9 | 64.32 |
| Bra036754.1-P | Field mustard | nucleus | 64.19 | 51.4 |
| KRH24407 | Soybean | nucleus | 31.88 | 34.27 |
| PGSC0003DMT400059770 | Potato | nucleus | 25.76 | 32.6 |
| Solyc01g068450.2.1 | Tomato | nucleus | 28.38 | 32.18 |
| HORVU3Hr1G107330.1 | Barley | nucleus | 26.64 | 30.96 |
| TraesCS3D01G486000.1 | Wheat | nucleus | 23.14 | 29.12 |
| EES04224 | Sorghum | nucleus | 26.64 | 28.77 |
| TraesCS3B01G540900.1 | Wheat | cytosol | 26.2 | 28.71 |
| Os01t0950800-01 | Rice | nucleus | 26.2 | 28.57 |
| TraesCS7D01G049900.2 | Wheat | nucleus | 24.02 | 28.5 |
| KRH29386 | Soybean | nucleus | 32.75 | 28.09 |
| TraesCS3B01G540300.1 | Wheat | nucleus | 21.4 | 27.22 |
| TraesCS3D01G485500.1 | Wheat | cytosol | 24.45 | 27.18 |
| TraesCS7A01G054800.2 | Wheat | cytosol, mitochondrion, nucleus | 22.27 | 26.29 |
| Zm00001d011873_P001 | Maize | nucleus | 24.45 | 26.05 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 22.71 | 26.0 |
| Os10t0580500-00 | Rice | mitochondrion | 22.27 | 22.67 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 24.02 | 16.22 |
Protein Annotations
| EnsemblPlants:Bra028059.1 | EnsemblPlants:Bra028059.1-P | EnsemblPlantsGene:Bra028059 | InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 |
| PFAM:PF09811 | SEG:seg | UniParc:UPI000254287C | UniProt:M4EGZ4 | MapMan:35.2 | : |
Description
AT1G34570 (E=2e-061) | unknown protein
Coordinates
chrA09:+:18892053..18893675
Molecular Weight (calculated)
25288.4 Da
IEP (calculated)
4.556
GRAVY (calculated)
-0.574
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MCFVCYDYTD DKSNFAKELY GEGLQLSKPE QAGINLMSVR LGNDDHNLEG LDGSFFGSSN DEPSEAYSMN KEAEKICEKF HTVGYRDGIS AGQEAKAQEG
101: YNVGYMESVL AGYKFGIVRG VSSAIAFLPD ELREKLIDEQ ENKDKFHKLH DSVHALSTEA AMKVFYGTLT TKQVDDKSGE EGSDSSLASV TSTTDLASYV
201: SELSSLLDKS PKIEVRLDTY TKRSMEKKA
101: YNVGYMESVL AGYKFGIVRG VSSAIAFLPD ELREKLIDEQ ENKDKFHKLH DSVHALSTEA AMKVFYGTLT TKQVDDKSGE EGSDSSLASV TSTTDLASYV
201: SELSSLLDKS PKIEVRLDTY TKRSMEKKA
001: MEPPEDGKVN FAKELYGESL QISKLSNKDH GLENLDDPFY GSSDEDYSEA RVLDNENEQR RVKFHSAGYR DGIVVGKEAI AQEGYNFGYK ESVLAGYKFG
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:F4HV08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.