Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G540300.1 | Wheat | nucleus | 84.07 | 85.0 |
| TraesCS7D01G049900.2 | Wheat | nucleus | 65.38 | 61.66 |
| TraesCS3D01G485500.1 | Wheat | cytosol | 65.93 | 58.25 |
| Os01t0950800-01 | Rice | nucleus | 56.59 | 49.05 |
| EES04224 | Sorghum | nucleus | 54.95 | 47.17 |
| Zm00001d011873_P001 | Maize | nucleus | 53.3 | 45.12 |
| Os10t0580500-00 | Rice | mitochondrion | 48.35 | 39.11 |
| PGSC0003DMT400059770 | Potato | nucleus | 29.12 | 29.28 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 53.3 | 28.61 |
| Solyc01g068450.2.1 | Tomato | nucleus | 30.77 | 27.72 |
| CDY03143 | Canola | nucleus | 30.77 | 27.59 |
| KRH24407 | Soybean | nucleus | 31.87 | 27.23 |
| CDY12037 | Canola | nucleus | 29.12 | 26.11 |
| AT3G15750.1 | Thale cress | nucleus | 27.47 | 25.13 |
| Bra028059.1-P | Field mustard | cytosol | 29.12 | 23.14 |
| AT1G34570.1 | Thale cress | nucleus | 26.37 | 23.08 |
| KRH29386 | Soybean | nucleus | 30.77 | 20.97 |
| Bra036754.1-P | Field mustard | nucleus | 29.67 | 18.88 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G486000.1 | EnsemblPlantsGene:TraesCS3D01G486000 | InterPro:Yae1-like | PANTHER:PTHR18829 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3D:-:582133246..582134205
Molecular Weight (calculated)
20399.7 Da
IEP (calculated)
4.837
GRAVY (calculated)
-0.768
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPPSRQEG TYWHWHGNGE DAAADDGSSW CDYSDSPGHG SSLHTEWAHL QDQLHKMGYR EGISEGRKDA AQEGFNLEHR QSAPEGYKWG LVRGITSALA
101: SLPDSLKEKL LLDAQHRGKL EDLRNSVQEI SPEAAVRMFH ESIIQDNAPL VESRLQTIPN DLLLLLRECP DVQVPEELKR AP
101: SLPDSLKEKL LLDAQHRGKL EDLRNSVQEI SPEAAVRMFH ESIIQDNAPL VESRLQTIPN DLLLLLRECP DVQVPEELKR AP
001: MEKVYSFRSM NLDDPFYGSS DEEDYSEARV LGNENKQRRV KFHSAGYRDG IVAGKEAIAQ EGYNFGYKES VLNGYQFGLV RGVSSALAFL PDELREKLID
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:Q9LW04]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.