Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G34570.1 | Thale cress | nucleus | 48.95 | 67.31 |
| AT3G15750.1 | Thale cress | nucleus | 45.1 | 64.82 |
| Bra028059.1-P | Field mustard | cytosol | 51.4 | 64.19 |
| KRH24407 | Soybean | nucleus | 27.27 | 36.62 |
| HORVU3Hr1G107330.1 | Barley | nucleus | 22.03 | 31.98 |
| EES04224 | Sorghum | nucleus | 22.73 | 30.66 |
| KRH29386 | Soybean | nucleus | 28.32 | 30.34 |
| Solyc01g068450.2.1 | Tomato | nucleus | 21.33 | 30.2 |
| TraesCS3D01G486000.1 | Wheat | nucleus | 18.88 | 29.67 |
| TraesCS7D01G049900.2 | Wheat | nucleus | 19.93 | 29.53 |
| PGSC0003DMT400059770 | Potato | nucleus | 18.53 | 29.28 |
| TraesCS3B01G540900.1 | Wheat | cytosol | 20.98 | 28.71 |
| Os01t0950800-01 | Rice | nucleus | 20.98 | 28.57 |
| TraesCS3B01G540300.1 | Wheat | nucleus | 17.83 | 28.33 |
| TraesCS3D01G485500.1 | Wheat | cytosol | 20.28 | 28.16 |
| Zm00001d011873_P001 | Maize | nucleus | 20.98 | 27.91 |
| TraesCS7A01G054800.2 | Wheat | cytosol, mitochondrion, nucleus | 18.88 | 27.84 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 19.23 | 27.5 |
| Os10t0580500-00 | Rice | mitochondrion | 18.18 | 23.11 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 22.03 | 18.58 |
Protein Annotations
| EnsemblPlants:Bra036754.1 | EnsemblPlants:Bra036754.1-P | EnsemblPlantsGene:Bra036754 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | InterPro:DUF1604 | InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 |
| PFAM:PF07713 | PFAM:PF09811 | SEG:seg | UniParc:UPI0002545FC3 | UniProt:M4F6P4 | MapMan:35.1 |
Description
AT1G34570 (E=2e-065) | unknown protein
Coordinates
chrA08:+:7301938..7304515
Molecular Weight (calculated)
31121.8 Da
IEP (calculated)
4.577
GRAVY (calculated)
-0.682
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDEDDFVF HGTPIEREDE IASRKKKAVA GASGTLKTLP AWKQEVTDEE GRRRFHGAFT GGYSAGYYNT VGSKEDGKSN FAKELYGESL QLSKPETSLG
101: LSNLENEGGS FYGSSDEEPS EAYSMNKDTE NMREKFHMLG YRDGISAGQE AAAQEGYNVG YKESVLAGYK FGIVRGVSSA LAFLPDDLRE KLIDEQETRD
201: KFRNLHGSVH DLSTEAALKL FYGALTTKQG EEESGEKEPC SSLCSGSGCV SGSRSVSATN DLGSYVTELS SLLDNSPKIK VRLEDT
101: LSNLENEGGS FYGSSDEEPS EAYSMNKDTE NMREKFHMLG YRDGISAGQE AAAQEGYNVG YKESVLAGYK FGIVRGVSSA LAFLPDDLRE KLIDEQETRD
201: KFRNLHGSVH DLSTEAALKL FYGALTTKQG EEESGEKEPC SSLCSGSGCV SGSRSVSATN DLGSYVTELS SLLDNSPKIK VRLEDT
001: MEPPEDGKVN FAKELYGESL QISKLSNKDH GLENLDDPFY GSSDEDYSEA RVLDNENEQR RVKFHSAGYR DGIVVGKEAI AQEGYNFGYK ESVLAGYKFG
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:F4HV08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.