Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G054800.2 | Wheat | cytosol, mitochondrion, nucleus | 85.49 | 85.05 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 77.72 | 75.0 |
| TraesCS3D01G485500.1 | Wheat | cytosol | 73.58 | 68.93 |
| TraesCS3D01G486000.1 | Wheat | nucleus | 61.66 | 65.38 |
| Os01t0950800-01 | Rice | nucleus | 59.07 | 54.29 |
| EES04224 | Sorghum | nucleus | 56.48 | 51.42 |
| Zm00001d011873_P001 | Maize | nucleus | 54.4 | 48.84 |
| Os10t0580500-00 | Rice | mitochondrion | 50.26 | 43.11 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 54.92 | 31.27 |
| PGSC0003DMT400059770 | Potato | nucleus | 29.02 | 30.94 |
| KRH24407 | Soybean | nucleus | 32.64 | 29.58 |
| Solyc01g068450.2.1 | Tomato | nucleus | 30.05 | 28.71 |
| CDY03143 | Canola | nucleus | 29.53 | 28.08 |
| AT3G15750.1 | Thale cress | nucleus | 27.98 | 27.14 |
| CDY12037 | Canola | nucleus | 28.5 | 27.09 |
| AT1G34570.1 | Thale cress | nucleus | 27.98 | 25.96 |
| Bra028059.1-P | Field mustard | cytosol | 28.5 | 24.02 |
| KRH29386 | Soybean | nucleus | 32.12 | 23.22 |
| Bra036754.1-P | Field mustard | nucleus | 29.53 | 19.93 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G049900.2 | EnsemblPlantsGene:TraesCS7D01G049900 | InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 | PFAM:PF09811 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:25403418..25404912
Molecular Weight (calculated)
21419.8 Da
IEP (calculated)
5.703
GRAVY (calculated)
-0.725
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAVLDPLG GQARAAERWE APASTVHHGN GEDAAADDDS WCEASDSPGH DSSLHREWTH RQDQFHKMGY RDGITEGQKD VAQEGFNLGH RQSAHVGYKW
101: GLVRGVTSAF ASLPDSLKEK LLLDGQRRGK LEGLHNSVQE ISAQGALQLF HESTLKDNLR PEESKLQTIT KDLLLFLHEC PDVHVSEELK RVP
101: GLVRGVTSAF ASLPDSLKEK LLLDGQRRGK LEGLHNSVQE ISAQGALQLF HESTLKDNLR PEESKLQTIT KDLLLFLHEC PDVHVSEELK RVP
001: MEKVYSFRSM NLDDPFYGSS DEEDYSEARV LGNENKQRRV KFHSAGYRDG IVAGKEAIAQ EGYNFGYKES VLNGYQFGLV RGVSSALAFL PDELREKLID
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:Q9LW04]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.