Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G049900.2 | Wheat | nucleus | 85.05 | 85.49 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 75.77 | 73.5 |
| TraesCS3B01G540300.1 | Wheat | nucleus | 62.89 | 67.78 |
| Os01t0950800-01 | Rice | nucleus | 58.76 | 54.29 |
| EES04224 | Sorghum | nucleus | 55.67 | 50.94 |
| Zm00001d011873_P001 | Maize | nucleus | 53.09 | 47.91 |
| Os10t0580500-00 | Rice | mitochondrion | 48.45 | 41.78 |
| PGSC0003DMT400059770 | Potato | nucleus | 29.9 | 32.04 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 53.09 | 30.38 |
| Solyc01g068450.2.1 | Tomato | nucleus | 30.41 | 29.21 |
| KRH24407 | Soybean | nucleus | 29.9 | 27.23 |
| CDY03143 | Canola | nucleus | 27.84 | 26.6 |
| AT3G15750.1 | Thale cress | nucleus | 26.29 | 25.63 |
| CDY12037 | Canola | nucleus | 26.29 | 25.12 |
| AT1G34570.1 | Thale cress | nucleus | 26.29 | 24.52 |
| Bra028059.1-P | Field mustard | cytosol | 26.29 | 22.27 |
| KRH29386 | Soybean | nucleus | 29.9 | 21.72 |
| Bra036754.1-P | Field mustard | nucleus | 27.84 | 18.88 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G054800.2 | EnsemblPlantsGene:TraesCS7A01G054800 | InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 | PFAM:PF09811 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:26420171..26422011
Molecular Weight (calculated)
21561.9 Da
IEP (calculated)
5.509
GRAVY (calculated)
-0.738
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAVLDPLG GHARPAERRE APASTVHCGN GEDAAAADDD SWCDASDSTG HDSSLHREWT HRQDQFHKMG YRDGITEGQK DAAQEGFNLG HRQSADVGYK
101: WGLVRGITSA FASLSDSLKE KWLLDAQRRG KLEDLHNFVQ EISGQGALQL FHESTLKNNL RPEESKLQTI TKDLLLLLHE CPDVHVSEEL KRVP
101: WGLVRGITSA FASLSDSLKE KWLLDAQRRG KLEDLHNFVQ EISGQGALQL FHESTLKNNL RPEESKLQTI TKDLLLLLHE CPDVHVSEEL KRVP
001: MEKVYSFRSM NLDDPFYGSS DEEDYSEARV LGNENKQRRV KFHSAGYRDG IVAGKEAIAQ EGYNFGYKES VLNGYQFGLV RGVSSALAFL PDELREKLID
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:Q9LW04]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.