Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011873_P001 | Maize | nucleus | 84.43 | 83.26 |
| Os01t0950800-01 | Rice | nucleus | 62.74 | 63.33 |
| HORVU3Hr1G107330.1 | Barley | nucleus | 56.13 | 60.41 |
| TraesCS3D01G485500.1 | Wheat | cytosol | 55.66 | 57.28 |
| TraesCS3B01G540900.1 | Wheat | cytosol | 56.13 | 56.94 |
| TraesCS7D01G049900.2 | Wheat | nucleus | 51.42 | 56.48 |
| TraesCS7A01G054800.2 | Wheat | cytosol, mitochondrion, nucleus | 50.94 | 55.67 |
| TraesCS3D01G486000.1 | Wheat | nucleus | 47.17 | 54.95 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 51.42 | 54.5 |
| TraesCS3B01G540300.1 | Wheat | nucleus | 45.75 | 53.89 |
| Os10t0580500-00 | Rice | mitochondrion | 51.42 | 48.44 |
| PGSC0003DMT400059770 | Potato | nucleus | 29.25 | 34.25 |
| AT3G15750.1 | Thale cress | nucleus | 29.25 | 31.16 |
| Solyc01g068450.2.1 | Tomato | nucleus | 28.77 | 30.2 |
| CDY12037 | Canola | nucleus | 28.77 | 30.05 |
| CDY03143 | Canola | nucleus | 28.3 | 29.56 |
| AT1G34570.1 | Thale cress | nucleus | 28.3 | 28.85 |
| KRH24407 | Soybean | nucleus | 28.3 | 28.17 |
| Bra028059.1-P | Field mustard | cytosol | 28.77 | 26.64 |
| KRH29386 | Soybean | nucleus | 29.72 | 23.6 |
| Bra036754.1-P | Field mustard | nucleus | 30.66 | 22.73 |
Protein Annotations
| EnsemblPlants:EES04224 | EnsemblPlantsGene:SORBI_3003G426800 | EntrezGene:8077356 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0042273 | InterPro:Essential_protein_Yae1_N |
| InterPro:Yae1-like | PANTHER:PTHR18829 | PFAM:PF09811 | ProteinID:EES04224 | ProteinID:EES04224.1 | RefSeq:XP_002459104.1 |
| unigene:Sbi.12351 | UniParc:UPI0001A85738 | UniProt:C5XHW2 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr3:-:73044713..73046380
Molecular Weight (calculated)
22971.4 Da
IEP (calculated)
4.538
GRAVY (calculated)
-0.588
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRGDADGV TSSMGELSVE AAPSSIEAEV PQHANGGDVA AAELDDVWED VSDSPRHANT LDREWIHRQN QFQKMGYRDG ITEGQKDSAQ EGFNVGFRQS
101: VNVGYKWGLV RGVASALASL PDSLKEKLVP DVQHRGKLQD LHNSVHEISA DDALQMFHES LCQSNRPSEG SGSHVTSTSN GATESNRMES LSKDLVLLLH
201: ECSDIKVSEE LA
101: VNVGYKWGLV RGVASALASL PDSLKEKLVP DVQHRGKLQD LHNSVHEISA DDALQMFHES LCQSNRPSEG SGSHVTSTSN GATESNRMES LSKDLVLLLH
201: ECSDIKVSEE LA
001: MEKVYSFRSM NLDDPFYGSS DEEDYSEARV LGNENKQRRV KFHSAGYRDG IVAGKEAIAQ EGYNFGYKES VLNGYQFGLV RGVSSALAFL PDELREKLID
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
101: KQETREKFQK LHSSVHALST EVAMKRFYET LTTKQGEEKS GEEGPDSCSD SGSGSGVNVT TDLGSYVTEL SSLLDKSPTI EVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:Q9LW04]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.