Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G485500.1 | Wheat | cytosol | 80.86 | 82.04 |
| HORVU3Hr1G107330.1 | Barley | nucleus | 77.03 | 81.73 |
| TraesCS3B01G540300.1 | Wheat | nucleus | 55.5 | 64.44 |
| Os01t0950800-01 | Rice | nucleus | 61.24 | 60.95 |
| EES04224 | Sorghum | nucleus | 56.94 | 56.13 |
| Zm00001d011873_P001 | Maize | nucleus | 52.63 | 51.16 |
| Os10t0580500-00 | Rice | mitochondrion | 45.93 | 42.67 |
| PGSC0003DMT400059770 | Potato | nucleus | 28.23 | 32.6 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 51.2 | 31.56 |
| KRH24407 | Soybean | nucleus | 30.62 | 30.05 |
| Solyc01g068450.2.1 | Tomato | nucleus | 28.71 | 29.7 |
| CDY03143 | Canola | nucleus | 28.23 | 29.06 |
| CDY12037 | Canola | nucleus | 28.23 | 29.06 |
| AT3G15750.1 | Thale cress | nucleus | 27.27 | 28.64 |
| Bra028059.1-P | Field mustard | cytosol | 28.71 | 26.2 |
| AT1G34570.1 | Thale cress | nucleus | 25.84 | 25.96 |
| KRH29386 | Soybean | nucleus | 30.14 | 23.6 |
| Bra036754.1-P | Field mustard | nucleus | 28.71 | 20.98 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G540900.1 | EnsemblPlantsGene:TraesCS3B01G540900 | InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 | PFAM:PF09811 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:779535679..779536732
Molecular Weight (calculated)
22869.5 Da
IEP (calculated)
4.889
GRAVY (calculated)
-0.698
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQVQTGFPM AGSEDVRGLA ASLGELHVEA SPSREEGTNG HGNGDAAAAA AADDDVWGDA SDSPGHDSDL KREWDHRQEQ FHKMGYRDGI TEGQKDVAQE
101: GFNLGHRQSA DVGFKWGLVR GITSALASLP NNLKEKLLLD AQRRGKLEDL HKSVQEISAE AALRLFHGST LQDNRQPEES KLQTTTKDLL LLLHECPDVH
201: VSEELKQVP
101: GFNLGHRQSA DVGFKWGLVR GITSALASLP NNLKEKLLLD AQRRGKLEDL HKSVQEISAE AALRLFHGST LQDNRQPEES KLQTTTKDLL LLLHECPDVH
201: VSEELKQVP
001: MEPPEDGKVN FAKELYGESL QISKLSNKDH GLENLDDPFY GSSDEDYSEA RVLDNENEQR RVKFHSAGYR DGIVVGKEAI AQEGYNFGYK ESVLAGYKFG
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:F4HV08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.