Factsheet for Zm00001d042093_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 1
golgi 2
mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011873_P001	Maize	nucleus	43.95	69.3
Os01t0950800-01	Rice	nucleus	36.28	58.57
HORVU3Hr1G107330.1	Barley	nucleus	33.04	56.85
TraesCS3B01G540300.1	Wheat	nucleus	29.5	55.56
TraesCS7D01G049900.2	Wheat	nucleus	31.27	54.92
TraesCS3D01G485500.1	Wheat	cytosol	32.45	53.4
TraesCS3D01G486000.1	Wheat	nucleus	28.61	53.3
TraesCS7A01G054800.2	Wheat	cytosol, mitochondrion, nucleus	30.38	53.09
HORVU7Hr1G009930.1	Barley	cytosol, nucleus	30.68	52.0
TraesCS3B01G540900.1	Wheat	cytosol	31.56	51.2
Os10t0580500-00	Rice	mitochondrion	31.27	47.11
PGSC0003DMT400059770	Potato	nucleus	17.7	33.15
Solyc01g068450.2.1	Tomato	nucleus	17.7	29.7
KRH24407	Soybean	nucleus	18.58	29.58
AT3G15750.1	Thale cress	nucleus	17.11	29.15
AT1G34570.1	Thale cress	nucleus	17.4	28.37
CDY12037	Canola	nucleus	15.93	26.6
KRH29386	Soybean	nucleus	20.65	26.22
CDY03143	Canola	nucleus	15.63	26.11
Bra028059.1-P	Field mustard	cytosol	16.22	24.02
Bra036754.1-P	Field mustard	nucleus	18.58	22.03

Protein Annotations

EnsemblPlants:Zm00001d042093_P001	EnsemblPlants:Zm00001d042093_T001	EnsemblPlantsGene:Zm00001d042093	EntrezGene:100194115	InterPro:Essential_protein_Yae1_N	InterPro:Yae1-like
PANTHER:PTHR18829	PFAM:PF09811	ProteinID:ONM34539.1	SEG:seg	UniParc:UPI000843BCC2	UniProt:A0A1D6N1E0
MapMan:35.2	:	:	:	:	:

Description

Essential protein Yae1 N-terminal

Coordinates

chr3:+:150547662..150550343

Molecular Weight (calculated)

36624.0 Da

IEP (calculated)

6.726

GRAVY (calculated)

-0.338

Length

339 amino acids

Sequence
(BLAST)

001: MGYFQKAGLL DLFGSWASAF NLAQEQPMEP TPQRFSPTCN LSGISLLRKP SAFAGPFSLL SHASQAPTGT ASPHPTGVAL PLSGCSLLLL ACACSCWASA
101: PAQRRQRLEF LNGQPRGCGG HHHLHGGAER RSSDFVSFIS CWNLVGLLMQ NFVPANGGGD VAAVDQDDVW EDVSDSHGHA STLDREWIHR QNQFQKMGYR
201: DGITQGQKDS AQEGFNAGFR QSVNAGYKWG LVRGVASSAL ANLPDSLKEK LVPDVQCRGK LQDLHSSVRE ISADDALQMF HESIRQSNPP SEGSGSYVVA
301: SATDGATEPN RMKSLPKDLV LLLRECSDIK VSKELAWDS

Best Arabidopsis Sequence Match ( AT1G34570.1 )
(BLAST)

001: MEPPEDGKVN FAKELYGESL QISKLSNKDH GLENLDDPFY GSSDEDYSEA RVLDNENEQR RVKFHSAGYR DGIVVGKEAI AQEGYNFGYK ESVLAGYKFG
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT

Arabidopsis Description

Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:F4HV08]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.