Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03143 | Canola | nucleus | 95.07 | 95.07 |
| Bra028059.1-P | Field mustard | cytosol | 94.09 | 83.41 |
| AT1G34570.1 | Thale cress | nucleus | 69.95 | 68.27 |
| AT3G15750.1 | Thale cress | nucleus | 63.55 | 64.82 |
| KRH24407 | Soybean | nucleus | 34.98 | 33.33 |
| Solyc01g068450.2.1 | Tomato | nucleus | 32.02 | 32.18 |
| PGSC0003DMT400059770 | Potato | nucleus | 28.57 | 32.04 |
| HORVU3Hr1G107330.1 | Barley | nucleus | 30.05 | 30.96 |
| TraesCS3D01G486000.1 | Wheat | nucleus | 26.11 | 29.12 |
| EES04224 | Sorghum | nucleus | 30.05 | 28.77 |
| TraesCS7D01G049900.2 | Wheat | nucleus | 27.09 | 28.5 |
| TraesCS3B01G540900.1 | Wheat | cytosol | 29.06 | 28.23 |
| TraesCS3B01G540300.1 | Wheat | nucleus | 24.63 | 27.78 |
| KRH29386 | Soybean | nucleus | 36.45 | 27.72 |
| Os01t0950800-01 | Rice | nucleus | 28.57 | 27.62 |
| TraesCS3D01G485500.1 | Wheat | cytosol | 27.59 | 27.18 |
| Zm00001d011873_P001 | Maize | nucleus | 28.08 | 26.51 |
| TraesCS7A01G054800.2 | Wheat | cytosol, mitochondrion, nucleus | 25.12 | 26.29 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 25.62 | 26.0 |
| Os10t0580500-00 | Rice | mitochondrion | 23.65 | 21.33 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 26.6 | 15.93 |
Protein Annotations
| EnsemblPlants:CDY12037 | EnsemblPlantsGene:GSBRNA2T00060978001 | InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 | PFAM:PF09811 |
| ProteinID:CDY12037 | ProteinID:CDY12037.1 | SEG:seg | UniParc:UPI0004EF045C | UniProt:A0A078FGF4 | MapMan:35.2 |
Description
BnaAnng02220DBnaAnng02220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGF4]
Coordinates
chrLK032016:+:818457..820398
Molecular Weight (calculated)
22290.5 Da
IEP (calculated)
4.375
GRAVY (calculated)
-0.692
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPSEDDKSN FAKELYGEGL QLSKPGNDDH NLEGLDGSFF GSSNDEPSEA YSMNKEAEKI REKFHTVGYR DGISAGQEAS AQEGYNVGYR ESVLAGYKFG
101: IVRGVSSAIA FFPDELREKL IDEQETKDKF RKLHDSVHAL STEAAMKVFY GTLTTKQVDD KSGEEGSDSS LASITSTTDL ASYVSELSSL LDKSPKIEVR
201: LDT
101: IVRGVSSAIA FFPDELREKL IDEQETKDKF RKLHDSVHAL STEAAMKVFY GTLTTKQVDD KSGEEGSDSS LASITSTTDL ASYVSELSSL LDKSPKIEVR
201: LDT
001: MEPPEDGKVN FAKELYGESL QISKLSNKDH GLENLDDPFY GSSDEDYSEA RVLDNENEQR RVKFHSAGYR DGIVVGKEAI AQEGYNFGYK ESVLAGYKFG
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:F4HV08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.