Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04224 | Sorghum | nucleus | 83.26 | 84.43 |
| Os01t0950800-01 | Rice | nucleus | 59.53 | 60.95 |
| HORVU3Hr1G107330.1 | Barley | nucleus | 54.42 | 59.39 |
| TraesCS3D01G485500.1 | Wheat | cytosol | 53.95 | 56.31 |
| TraesCS3B01G540300.1 | Wheat | nucleus | 46.51 | 55.56 |
| TraesCS7D01G049900.2 | Wheat | nucleus | 48.84 | 54.4 |
| HORVU7Hr1G009930.1 | Barley | cytosol, nucleus | 49.77 | 53.5 |
| TraesCS3D01G486000.1 | Wheat | nucleus | 45.12 | 53.3 |
| TraesCS7A01G054800.2 | Wheat | cytosol, mitochondrion, nucleus | 47.91 | 53.09 |
| TraesCS3B01G540900.1 | Wheat | cytosol | 51.16 | 52.63 |
| Os10t0580500-00 | Rice | mitochondrion | 46.98 | 44.89 |
| Zm00001d042093_P001 | Maize | extracellular, golgi | 69.3 | 43.95 |
| PGSC0003DMT400059770 | Potato | nucleus | 27.91 | 33.15 |
| Solyc01g068450.2.1 | Tomato | nucleus | 27.91 | 29.7 |
| AT3G15750.1 | Thale cress | nucleus | 27.44 | 29.65 |
| CDY12037 | Canola | nucleus | 26.51 | 28.08 |
| AT1G34570.1 | Thale cress | nucleus | 26.98 | 27.88 |
| CDY03143 | Canola | nucleus | 26.05 | 27.59 |
| KRH24407 | Soybean | nucleus | 26.98 | 27.23 |
| Bra028059.1-P | Field mustard | cytosol | 26.05 | 24.45 |
| KRH29386 | Soybean | nucleus | 27.91 | 22.47 |
| Bra036754.1-P | Field mustard | nucleus | 27.91 | 20.98 |
Protein Annotations
| EMBL:BT060511 | EMBL:BT062709 | EnsemblPlants:Zm00001d011873_P001 | EnsemblPlants:Zm00001d011873_T001 | EnsemblPlantsGene:Zm00001d011873 | EntrezGene:100382336 |
| InterPro:Essential_protein_Yae1_N | InterPro:Yae1-like | PANTHER:PTHR18829 | PFAM:PF09811 | ProteinID:AQK98224.1 | ProteinID:AQK98225.1 |
| UniParc:UPI00019486CE | UniProt:C0HDV5 | MapMan:35.2 | : | : | : |
Description
Essential protein Yae1 N-terminal
Coordinates
chr8:+:163443311..163445290
Molecular Weight (calculated)
23334.9 Da
IEP (calculated)
4.597
GRAVY (calculated)
-0.594
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPRDAVDV SSSMSELSVE AAPSSIEVQV PKQANGGDVA AAELDDVWED VSGSPRHADT LDREWIHRQS QFQKMGYRDG VTEGQKDSAQ EGFNVGFRQS
101: VNVGYKWGLV RGVGSALASL PDSLKEKLVP DVQRRGKLQD LHRSVQEISA DDAVQMFHES ICQSNRPSDG SGSHVTSTSD GATESNRMKS LSKDLVLLLR
201: ECSDIKVSEE LASDS
101: VNVGYKWGLV RGVGSALASL PDSLKEKLVP DVQRRGKLQD LHRSVQEISA DDAVQMFHES ICQSNRPSDG SGSHVTSTSD GATESNRMKS LSKDLVLLLR
201: ECSDIKVSEE LASDS
001: MEPPEDGKVN FAKELYGESL QISKLSNKDH GLENLDDPFY GSSDEDYSEA RVLDNENEQR RVKFHSAGYR DGIVVGKEAI AQEGYNFGYK ESVLAGYKFG
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
101: IVRGVSSALA FLPVEFREKL IDEQETREKF QKLHSSVHAL STEVAMKQFY ETLTTKQGEE KSGEEGPDSC SVSGSCSGVN VTADLGSYVT ELSSLLDKSP
201: TIEVKFDT
Arabidopsis Description
Essential protein Yae1, N-terminal [Source:UniProtKB/TrEMBL;Acc:F4HV08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.