Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G134000.1 | Wheat | nucleus | 94.12 | 93.96 |
| TraesCS7A01G134600.1 | Wheat | nucleus | 93.77 | 93.61 |
| Os02t0506100-00 | Rice | plastid | 41.52 | 55.05 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 42.39 | 43.99 |
| KXG30263 | Sorghum | mitochondrion | 47.23 | 43.89 |
| Zm00001d000402_P001 | Maize | mitochondrion | 39.62 | 41.79 |
| Bra006620.1-P | Field mustard | nucleus | 21.97 | 28.16 |
| CDX70996 | Canola | nucleus | 22.66 | 27.58 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 30.62 | 27.15 |
| CDX88802 | Canola | nucleus | 21.97 | 27.14 |
| Bra002404.1-P | Field mustard | nucleus | 22.32 | 26.65 |
| AT5G22310.1 | Thale cress | nucleus | 22.15 | 26.61 |
| CDX92367 | Canola | mitochondrion, plastid | 21.97 | 26.46 |
| CDY67997 | Canola | mitochondrion, plastid | 21.28 | 26.11 |
| CDY01038 | Canola | plastid | 26.99 | 25.57 |
| Bra034827.1-P | Field mustard | plastid | 26.99 | 25.41 |
| VIT_08s0007g02790.t01 | Wine grape | plastid | 28.89 | 25.38 |
| CDY08511 | Canola | plastid | 26.99 | 25.37 |
| PGSC0003DMT400072353 | Potato | plastid | 28.37 | 25.04 |
| KRH67971 | Soybean | plastid | 28.55 | 25.0 |
| Solyc10g083190.1.1 | Tomato | plastid | 28.55 | 24.96 |
| Solyc11g068720.1.1 | Tomato | nucleus | 27.34 | 24.92 |
| AT3G11590.1 | Thale cress | plastid | 26.47 | 24.6 |
| KRG96225 | Soybean | nucleus | 27.85 | 24.58 |
| Solyc06g074190.2.1 | Tomato | nucleus | 23.01 | 24.54 |
| Bra001412.1-P | Field mustard | nucleus | 14.71 | 24.5 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 26.12 | 24.47 |
| KRH25284 | Soybean | plastid | 27.34 | 23.98 |
| PGSC0003DMT400015076 | Potato | nucleus | 23.53 | 23.9 |
| KRH30384 | Soybean | plastid | 26.99 | 23.57 |
| PGSC0003DMT400067737 | Potato | nucleus | 23.18 | 23.47 |
| CDX73866 | Canola | cytosol | 14.36 | 22.49 |
| CDY56601 | Canola | cytosol, golgi, plastid | 14.36 | 22.49 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 20.24 | 20.42 |
| TraesCS2B01G286200.1 | Wheat | plastid | 17.99 | 16.97 |
| TraesCS1B01G329400.1 | Wheat | plastid | 18.34 | 16.13 |
| TraesCS2B01G492000.1 | Wheat | plastid | 18.86 | 15.91 |
| TraesCS7B01G197400.1 | Wheat | plastid | 16.44 | 14.75 |
| TraesCS7B01G238900.1 | Wheat | nucleus | 18.86 | 14.53 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G035800.1 | EnsemblPlantsGene:TraesCS7B01G035800 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF16 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:34708683..34712213
Molecular Weight (calculated)
64127.5 Da
IEP (calculated)
5.879
GRAVY (calculated)
-0.848
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRRRDAGEA VAAVEEVTTR PKIRKRCALS SSSGASGTLR RLRLRRGVVS LHRRGSGGVA SPLPTSWKMS ESSWSRACRA DGMHSSVSAR KLVSALWQMN
101: EGGLLEEEEE ARIARDAAAR RGSAAAHRRS ASSVEISKRS RTRSKVVSEA DHGRHWFSDK LSNAGTTGMQ ACAQDSSSTC SADRMAHLQD MYNSLTACKE
201: LVRVLGNIWG PGDLSPSTAS LLSALRSELD LARAHARQLA RERSHRGSET VELMKKRLEA EARAWKSKQR EKVAATVRVV CDELDGERRS RRRAERVSAK
301: LGSALAEAER ELERERRSRE RLEKVCDELV RGGEVEEEVR REAEEAQAEV DREREMLRLA DELREERVQM KLLEARLQFE EKNAVVEQLR GELEAFLETK
401: KQGLLELESP AAADEERQAT HDDDDHHGFF EAEGGNGVAR VDVNKRTDVD DDGGGSGDDS DGSDMHSIEL NMDGGRNKDY GGWSYTTAFK EMMTTTAKKA
501: ASADSRGTGC ADLWAGDRRS LEEPEGGQRW DDDEGRSDVD EEDSERYQAI KNLREQMLAG HGLGSIFLSG AYEGNYTA
101: EGGLLEEEEE ARIARDAAAR RGSAAAHRRS ASSVEISKRS RTRSKVVSEA DHGRHWFSDK LSNAGTTGMQ ACAQDSSSTC SADRMAHLQD MYNSLTACKE
201: LVRVLGNIWG PGDLSPSTAS LLSALRSELD LARAHARQLA RERSHRGSET VELMKKRLEA EARAWKSKQR EKVAATVRVV CDELDGERRS RRRAERVSAK
301: LGSALAEAER ELERERRSRE RLEKVCDELV RGGEVEEEVR REAEEAQAEV DREREMLRLA DELREERVQM KLLEARLQFE EKNAVVEQLR GELEAFLETK
401: KQGLLELESP AAADEERQAT HDDDDHHGFF EAEGGNGVAR VDVNKRTDVD DDGGGSGDDS DGSDMHSIEL NMDGGRNKDY GGWSYTTAFK EMMTTTAKKA
501: ASADSRGTGC ADLWAGDRRS LEEPEGGQRW DDDEGRSDVD EEDSERYQAI KNLREQMLAG HGLGSIFLSG AYEGNYTA
001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
Arabidopsis Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.