Factsheet for TraesCS5D01G538500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G498700.1
TraesCS6A01G180500.1
TraesCS6A01G298800.1
TraesCS6B01G328200.1
TraesCS6D01G164600.1
TraesCS6D01G278500.1
TraesCS7A01G001900.1
TraesCS7A01G200700.1
TraesCS7B01G107500.1
TraesCS7D01G001600.2
TraesCS7D01G204000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01630.1	TraesCS6A01G298800.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6B01G328200.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6D01G278500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7A01G200700.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7B01G107500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7D01G204000.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS4A01G498700.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7A01G001900.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7D01G001600.2	AT3G54850.1	21798944
AT1G01630.1	TraesCS6A01G180500.1	AT4G32190.1	21798944
AT1G01630.1	TraesCS6D01G164600.1	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G552100.1	Wheat	cytosol	91.84	92.98
TraesCS5D01G538600.1	Wheat	cytosol	79.59	80.58
TraesCS5D01G538300.1	Wheat	cytosol	72.24	69.41
EER90511	Sorghum	cytosol	68.98	67.6
Os03t0850700-01	Rice	cytosol	71.84	67.43
TraesCS5D01G538700.1	Wheat	cytosol	82.86	64.24
Zm00001d012847_P001	Maize	cytosol	68.57	60.87
TraesCS3D01G433800.1	Wheat	cytosol	54.69	55.83
TraesCS3D01G433700.1	Wheat	cytosol	55.1	54.22
GSMUA_Achr4P15920_001	Banana	cytosol	56.33	52.47
VIT_01s0150g00170.t01	Wine grape	cytosol	51.02	50.81
Bra032645.1-P	Field mustard	cytosol	47.76	50.65
AT1G01630.1	Thale cress	cytosol	51.43	49.41
Bra033247.1-P	Field mustard	cytosol	50.61	48.63
CDX90047	Canola	cytosol	50.61	48.63
CDY15164	Canola	cytosol	50.61	48.63
KRH41051	Soybean	cytosol	48.16	47.58
VIT_17s0000g00130.t01	Wine grape	cytosol	49.39	47.27
KRH54081	Soybean	cytosol	49.8	46.04
CDY38020	Canola	cytosol	48.57	45.42
KRH63881	Soybean	cytosol	48.57	45.08
PGSC0003DMT400036745	Potato	cytosol	49.39	44.65
Solyc03g118150.2.1	Tomato	cytosol	49.39	44.65
KRH59732	Soybean	endoplasmic reticulum, golgi	44.49	38.11
Solyc06g068800.2.1	Tomato	cytosol	47.76	37.86
PGSC0003DMT400065724	Potato	cytosol	47.76	37.86
TraesCS4D01G055200.1	Wheat	cytosol	27.35	22.95
TraesCS4D01G055300.1	Wheat	cytosol	26.53	22.26
TraesCS3D01G186000.2	Wheat	nucleus	27.35	22.11
TraesCS4D01G055400.1	Wheat	cytosol	25.71	21.58
TraesCS4D01G055100.1	Wheat	cytosol	18.37	21.53
TraesCS7D01G090800.1	Wheat	cytosol	22.04	19.08
TraesCS3D01G453300.2	Wheat	cytosol, mitochondrion, nucleus, plastid	21.63	19.0
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	22.86	18.06
TraesCS6D01G281700.1	Wheat	nucleus	24.9	15.52
TraesCS4D01G242900.1	Wheat	cytosol	23.27	12.69

Protein Annotations

EnsemblPlants:TraesCS5D01G538500.1	EnsemblPlantsGene:TraesCS5D01G538500	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF158	PFAM:PF00650
PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:550578409..550580007

Molecular Weight (calculated)

28078.7 Da

IEP (calculated)

8.190

GRAVY (calculated)

-0.449

Length

245 amino acids

Sequence
(BLAST)

001: MDHRVTDDEH QHGHGDSGGD AAEWKKVAEL RAVAEAQDPA AKEEDDFVLG RFLRARDYNI GKASMMLLQY LAWKRVAKPH GSISGEEVRD EIAKKRVDMQ
101: GFDRLGRPMA YIYGARHFPS RRDLDGFKRY VAYVLDKICT RLPVGQEKFS AVIDLRGWGY ANCDIRGYVA ALDIMQSYYP ERLGRVFLIH VPYMFMAAWK
201: MVYPFIDDKT KKKFVFVADK DLDATLRDAI DESQLPEAYG GKLKL

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.