Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0186400-01 | |
| Os02t0736100-01 | |
| Os06t0102700-01 | |
| Os06t0251700-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01630.1 | Os02t0736100-01 | AT1G68060.1 | 21798944 |
| AT1G01630.1 | Os06t0251700-01 | AT1G68060.1 | 21798944 |
| AT1G01630.1 | Os06t0102700-01 | AT3G54850.1 | 21798944 |
| AT1G01630.1 | Os02t0186400-01 | AT4G32190.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90511 | Sorghum | cytosol | 71.26 | 74.4 |
| TraesCS5B01G552100.1 | Wheat | cytosol | 67.82 | 73.14 |
| TraesCS5B01G551900.1 | Wheat | cytosol | 70.5 | 72.16 |
| TraesCS5B01G451100.1 | Wheat | cytosol | 68.97 | 72.0 |
| TraesCS5D01G538500.1 | Wheat | cytosol | 67.43 | 71.84 |
| TraesCS5B01G552400.1 | Wheat | cytosol | 67.05 | 71.43 |
| TraesCS4A01G333800.1 | Wheat | cytosol | 69.73 | 71.37 |
| TraesCS4A01G333500.1 | Wheat | cytosol | 63.98 | 71.06 |
| TraesCS5D01G538300.1 | Wheat | cytosol | 68.97 | 70.59 |
| HORVU5Hr1G122080.1 | Barley | cytosol | 66.67 | 70.45 |
| TraesCS5B01G552300.1 | Wheat | cytosol | 64.75 | 69.83 |
| HORVU5Hr1G121940.5 | Barley | cytosol | 66.28 | 69.48 |
| TraesCS5D01G538600.1 | Wheat | cytosol | 64.37 | 69.42 |
| Zm00001d012847_P001 | Maize | cytosol | 70.5 | 66.67 |
| TraesCS5B01G552200.1 | Wheat | cytosol | 62.45 | 63.92 |
| Os01t0926800-01 | Rice | cytosol, mitochondrion | 54.02 | 57.09 |
| TraesCS5D01G538700.1 | Wheat | cytosol | 64.75 | 53.48 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 53.64 | 53.23 |
| HORVU5Hr1G121860.2 | Barley | plastid | 68.58 | 52.96 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 49.43 | 52.44 |
| Bra032645.1-P | Field mustard | cytosol | 44.83 | 50.65 |
| KRH41051 | Soybean | cytosol | 47.13 | 49.6 |
| AT1G01630.1 | Thale cress | cytosol | 47.89 | 49.02 |
| Bra033247.1-P | Field mustard | cytosol | 47.51 | 48.63 |
| CDX90047 | Canola | cytosol | 47.51 | 48.63 |
| CDY15164 | Canola | cytosol | 47.51 | 48.63 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 46.36 | 47.27 |
| Solyc03g118150.2.1 | Tomato | cytosol | 47.89 | 46.13 |
| PGSC0003DMT400036745 | Potato | cytosol | 47.51 | 45.76 |
| CDY38020 | Canola | cytosol | 45.59 | 45.42 |
| KRH54081 | Soybean | cytosol | 45.98 | 45.28 |
| KRH63881 | Soybean | cytosol | 44.83 | 44.32 |
| Solyc06g068800.2.1 | Tomato | cytosol | 48.66 | 41.1 |
| PGSC0003DMT400065724 | Potato | cytosol | 48.28 | 40.78 |
| KRH59732 | Soybean | endoplasmic reticulum, golgi | 41.38 | 37.76 |
| Os03t0724100-01 | Rice | cytosol | 27.97 | 24.41 |
| Os01t0264700-01 | Rice | cytosol | 24.9 | 20.9 |
| Os05t0267800-01 | Rice | cytosol | 21.07 | 19.43 |
| Os02t0321500-01 | Rice | mitochondrion | 18.77 | 18.77 |
| Os02t0752000-01 | Rice | cytosol | 22.61 | 15.61 |
| Os03t0219100-01 | Rice | cytosol | 22.99 | 13.7 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | EntrezGene:4334796 | ProteinID:AAO20076.1 | ProteinID:ABF99921.1 | EMBL:AK061542 |
| EMBL:AK099525 | ProteinID:BAF13822.1 | ProteinID:BAS87377.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | EnsemblPlantsGene:Os03g0850700 | EnsemblPlants:Os03t0850700-01 | PFAM:PF00650 |
| PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 | UniProt:Q851Z2 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | TMHMM:TMhelix | UniParc:UPI000000278D | RefSeq:XP_015628267.1 | : |
Description
Similar to Phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein. (Os03t0850700-01);Similar to Phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein. (Os03t0850700-02)
Coordinates
chr3:-:35810027..35814626
Molecular Weight (calculated)
30160.9 Da
IEP (calculated)
8.269
GRAVY (calculated)
-0.621
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYCKQQERD GHRDDGDVTE WKKVAELRAV VEAQDPACKE EDDYQLRRFL RARDHNIGKA SAMLVKYLQW KREVKPGGRA IADEEVRGEL AQEKLYMQGY
101: DRQGRPLVYG FGARHFPARR DLDEFKRYVV YVLDRTCARL GGNGGQEKFA AVADLQGWGY YGNCDIRAYV AALEIMQNYY PERLGRVFLI HVPYVFMAAW
201: KIIYPFIDDN TKKKFVFVAD KDLHATLRDA IDDSNLAEDY GGKLKLVSPL INGATESNRR R
101: DRQGRPLVYG FGARHFPARR DLDEFKRYVV YVLDRTCARL GGNGGQEKFA AVADLQGWGY YGNCDIRAYV AALEIMQNYY PERLGRVFLI HVPYVFMAAW
201: KIIYPFIDDN TKKKFVFVAD KDLHATLRDA IDDSNLAEDY GGKLKLVSPL INGATESNRR R
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.