Factsheet for Os02t0321500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	86.21	85.88
HORVU0Hr1G022240.10	Barley	mitochondrion	85.44	85.11
KXG19106	Sorghum	plastid	81.99	83.59
Zm00001d045573_P004	Maize	plastid	46.74	75.78
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	86.97	73.23
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	85.82	73.2
GSMUA_Achr3P14480_001	Banana	mitochondrion	69.35	69.08
Solyc03g112640.2.1	Tomato	plastid	65.52	65.27
PGSC0003DMT400046785	Potato	mitochondrion	64.37	64.12
KRH57102	Soybean	cytosol, plastid	62.84	62.6
KRH03256	Soybean	endoplasmic reticulum, plastid	62.84	62.6
VIT_17s0000g08850.t01	Wine grape	mitochondrion	62.07	62.31
CDY16746	Canola	plastid	57.85	59.45
CDX87279	Canola	plastid	57.85	59.45
Bra035864.1-P	Field mustard	plastid	57.85	59.45
AT5G63060.1	Thale cress	plastid	58.62	58.17
Zm00001d045574_P002	Maize	plastid	79.69	40.47
Os01t0926800-01	Rice	cytosol, mitochondrion	21.07	22.27
Os03t0850700-01	Rice	cytosol	18.77	18.77
Os01t0264700-01	Rice	cytosol	19.92	16.72
Os05t0267800-01	Rice	cytosol	16.86	15.55
Os03t0724100-01	Rice	cytosol	17.62	15.38
Os02t0752000-01	Rice	cytosol	22.22	15.34
Os03t0219100-01	Rice	cytosol	19.16	11.42

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EntrezGene:4329168	EMBL:AK064540	ProteinID:BAD28849.1	ProteinID:BAF08601.1
ProteinID:BAS78380.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR001251	InterPro:IPR036865
EnsemblPlantsGene:Os02g0321500	EnsemblPlants:Os02t0321500-01	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF197
UniProt:Q6ER71	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00003CE80D	RefSeq:XP_015622870.1
RefSeq:XP_015622872.1	SEG:seg	:	:	:	:

Description

Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein. (Os02t0321500-01)

Coordinates

chr2:+:12846471..12851443

Molecular Weight (calculated)

29759.9 Da

IEP (calculated)

8.900

GRAVY (calculated)

-0.248

Length

261 amino acids

Sequence
(BLAST)

001: MAAACSFRSV ARAPPPLRGL ARRGVVHCCS TAPPSGGTST SSSKLVLEVK ERLEREHPGL PTGRNGRDDE EMILWFLKDR KLSVDETVSK LTKAIKWRQD
101: FQVSELSEES VKGLYQTGKA YVHDSFDIYG RPVLVVVASK HFPSKQDPVE NEKLCAFLVE KALSRLPLGT ENILGIFDLR GFQVENGDLQ FLKFLIDVFY
201: YYYPKRLGQV LFVDAPFVFQ PMWQLVKPLL KQYASLVRFC DVETVRKEYF TKETVPPDFR N

Best Arabidopsis Sequence Match ( AT5G63060.1 )
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.