Factsheet for AT5G63060.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87279	Canola	plastid	86.69	89.76
CDY16746	Canola	plastid	86.31	89.37
Bra035864.1-P	Field mustard	plastid	85.93	88.98
VIT_17s0000g08850.t01	Wine grape	mitochondrion	62.36	63.08
KRH03256	Soybean	endoplasmic reticulum, plastid	61.6	61.83
KRH57102	Soybean	cytosol, plastid	61.22	61.45
KXG19106	Sorghum	plastid	58.94	60.55
HORVU0Hr1G022240.10	Barley	mitochondrion	60.08	60.31
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	59.7	59.92
Solyc03g112640.2.1	Tomato	plastid	59.7	59.92
PGSC0003DMT400046785	Potato	mitochondrion	59.32	59.54
Os02t0321500-01	Rice	mitochondrion	58.17	58.62
GSMUA_Achr3P14480_001	Banana	mitochondrion	57.03	57.25
Zm00001d045573_P004	Maize	plastid	31.56	51.55
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	59.7	51.31
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	60.08	50.97
Zm00001d045574_P002	Maize	plastid	57.79	29.57
AT1G01630.1	Thale cress	cytosol	20.91	21.57
AT4G36640.3	Thale cress	cytosol	23.19	20.75
AT1G75170.1	Thale cress	cytosol	22.43	19.93
AT4G08690.2	Thale cress	cytosol	22.43	19.6
AT1G22180.4	Thale cress	cytosol	22.43	18.79
AT1G14820.3	Thale cress	cytosol	17.11	17.86
AT3G22410.1	Thale cress	cytosol	19.39	12.75
AT1G05370.1	Thale cress	cytosol	20.15	12.71

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EntrezGene:836426	ProteinID:AED97693.1	ArrayExpress:AT5G63060	EnsemblPlantsGene:AT5G63060
RefSeq:AT5G63060	TAIR:AT5G63060	RefSeq:AT5G63060-TAIR-G	EnsemblPlants:AT5G63060.1	TAIR:AT5G63060.1	Unigene:At.71282
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	UniProt:F4K975	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR001251	InterPro:IPR036865
RefSeq:NP_201111.2	PFAM:PF00650	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF197	SMART:SM00516
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00005DC2A7	:	:	:

Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]

Coordinates

chr5:-:25294954..25296896

Molecular Weight (calculated)

30150.4 Da

IEP (calculated)

9.112

GRAVY (calculated)

-0.159

Length

263 amino acids

Sequence
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.