Factsheet for AT1G05370.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64658	Canola	cytosol	76.74	93.84
Bra015421.1-P	Field mustard	cytosol	90.17	93.53
CDY10026	Canola	cytosol	91.85	92.07
CDY10103	Canola	extracellular	59.23	91.82
Bra032465.1-P	Field mustard	cytosol	90.89	91.11
CDY59787	Canola	cytosol	90.65	90.87
VIT_05s0020g03350.t01	Wine grape	cytosol	68.82	67.85
AT3G22410.1	Thale cress	cytosol	59.47	62.0
GSMUA_Achr7P27040_001	Banana	cytosol	56.83	54.48
GSMUA_Achr3P29630_001	Banana	cytosol	55.64	54.21
GSMUA_Achr6P25200_001	Banana	cytosol	53.0	51.88
Os03t0219100-01	Rice	cytosol	53.48	50.91
EER95261	Sorghum	cytosol	52.04	48.87
GSMUA_Achr5P08620_001	Banana	nucleus	53.72	48.28
TraesCS4D01G242900.1	Wheat	cytosol	51.8	48.11
Zm00001d048066_P001	Maize	cytosol	50.12	47.83
Zm00001d028231_P003	Maize	cytosol	51.56	47.57
TraesCS4B01G243300.1	Wheat	cytosol	51.08	47.12
TraesCS4A01G065900.1	Wheat	cytosol	51.08	46.41
HORVU4Hr1G067410.4	Barley	plastid	47.0	39.28
AT1G01630.1	Thale cress	cytosol	14.63	23.92
AT1G22180.4	Thale cress	cytosol	17.75	23.57
AT4G08690.2	Thale cress	cytosol	16.07	22.26
AT1G75170.1	Thale cress	cytosol	14.87	20.95
AT4G36640.3	Thale cress	cytosol	14.63	20.75
AT5G63060.1	Thale cress	plastid	12.71	20.15
AT1G14820.3	Thale cress	cytosol	11.99	19.84

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EntrezGene:837038	ProteinID:AEE27830.1	ArrayExpress:AT1G05370	EnsemblPlantsGene:AT1G05370
RefSeq:AT1G05370	TAIR:AT1G05370	RefSeq:AT1G05370-TAIR-G	EnsemblPlants:AT1G05370.1	TAIR:AT1G05370.1	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	UniProt:F4I8Q8	GO:GO:0005575	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865	RefSeq:NP_172029.2	PFAM:PF00650	PO:PO:0000037
PO:PO:0000293	PO:PO:0001078	PO:PO:0007611	PO:PO:0009010	PO:PO:0009046	PO:PO:0020100
PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI0001E92A85	SEG:seg	:	:	:	:

Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]

Coordinates

chr1:-:1569147..1572469

Molecular Weight (calculated)

47501.0 Da

IEP (calculated)

10.295

GRAVY (calculated)

-0.283

Length

417 amino acids

Sequence
(BLAST)

001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.