Factsheet for Bra032465.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59787	Canola	cytosol	99.76	99.76
CDY10026	Canola	cytosol	97.6	97.6
AT1G05370.1	Thale cress	cytosol	91.11	90.89
Bra015421.1-P	Field mustard	cytosol	87.02	90.05
VIT_05s0020g03350.t01	Wine grape	cytosol	67.07	65.96
Bra039949.1-P	Field mustard	cytosol	58.17	60.35
Bra023828.1-P	Field mustard	nucleus	56.25	57.78
GSMUA_Achr3P29630_001	Banana	cytosol	55.77	54.21
GSMUA_Achr7P27040_001	Banana	cytosol	56.49	54.02
GSMUA_Achr6P25200_001	Banana	cytosol	53.12	51.88
Os03t0219100-01	Rice	cytosol	53.61	50.91
EER95261	Sorghum	cytosol	52.64	49.32
Zm00001d048066_P001	Maize	cytosol	50.96	48.51
TraesCS4D01G242900.1	Wheat	cytosol	51.92	48.11
Zm00001d028231_P003	Maize	cytosol	52.16	48.01
GSMUA_Achr5P08620_001	Banana	nucleus	53.37	47.84
TraesCS4B01G243300.1	Wheat	cytosol	51.68	47.57
TraesCS4A01G065900.1	Wheat	cytosol	51.92	47.06
HORVU4Hr1G067410.4	Barley	plastid	47.36	39.48
Bra032645.1-P	Field mustard	cytosol	13.46	24.24
Bra033247.1-P	Field mustard	cytosol	14.66	23.92
Bra012311.1-P	Field mustard	cytosol	16.83	22.95
Bra000655.1-P	Field mustard	cytosol	16.35	22.01
Bra031370.1-P	Field mustard	cytosol	16.59	21.43
Bra010566.1-P	Field mustard	cytosol	14.9	21.16
Bra026185.1-P	Field mustard	cytosol	12.26	20.82
Bra017768.1-P	Field mustard	cytosol	14.18	20.42
Bra011696.1-P	Field mustard	nucleus	14.18	20.34
Bra026803.1-P	Field mustard	cytosol	12.26	20.08
Bra035864.1-P	Field mustard	plastid	12.02	19.68
Bra026802.1-P	Field mustard	cytosol	9.38	18.84
Bra015863.1-P	Field mustard	cytosol	14.18	15.36

Protein Annotations

EnsemblPlants:Bra032465.1	EnsemblPlants:Bra032465.1-P	EnsemblPlantsGene:Bra032465	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	PFAM:PF00650
PFscan:PS50191	SEG:seg	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002543596
UniProt:M4EUI3	MapMan:35.2	:	:	:	:

Description

AT3G22410 (E=5e-116) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05370.1); Has 1032 Blast hits to 1032 proteins in 165 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 243; Plants - 390; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).

Coordinates

chrA09:+:36188287..36191217

Molecular Weight (calculated)

47447.9 Da

IEP (calculated)

10.400

GRAVY (calculated)

-0.317

Length

416 amino acids

Sequence
(BLAST)

001: MGKKEQKDHS TVESVDKVEA VLHLLRKHSP LTLKQEKFCN RACVSRFLRT KGDNVKRAAK QLRSCLSWRS SLGIESLIAD EFTAELAEGL AYVAGLDDEC
101: RPVLVFRIKQ DYQKLHTQKQ LIRLVVFTLE VAISTMSRNV EEFVILFDAS LFKSASAFMN ILVTTLRIVA EYYPCRLYKT FVIDPPSLFS YLWKGVRAFV
201: DLSPTTTIVS MLDFQNSYDY DDFTSSYPSR VSSLRFDKSP TKPTDKISSS ASSRFAFTVS RDGLDTVKPW CLTLTDTSSS SKLGHTSAYI SPLNARSFSF
301: ASPAARREPI DGPRRSFFAS TPMPARTSDR HSIGTLRDPR IPRPSFFQSP AVFFRRESQV SKTEKPRDSF VPFLKFYRRP YDEMTYRSKM RPPLGGLVSI
401: VSSQIRRRHV SLSQRF

Best Arabidopsis Sequence Match ( AT1G05370.1 )
(BLAST)

001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.