Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G243300.1 | Wheat | cytosol | 97.55 | 96.9 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 97.1 | 94.99 |
| Os03t0219100-01 | Rice | cytosol | 76.17 | 78.08 |
| EER95261 | Sorghum | cytosol | 74.39 | 75.23 |
| Zm00001d048066_P001 | Maize | cytosol | 71.94 | 73.91 |
| Zm00001d028231_P003 | Maize | cytosol | 73.27 | 72.79 |
| HORVU4Hr1G067410.4 | Barley | plastid | 77.95 | 70.14 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 62.58 | 65.65 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 62.81 | 64.83 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 59.69 | 62.91 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 54.79 | 58.16 |
| PGSC0003DMT400077340 | Potato | cytosol | 53.23 | 56.5 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 58.35 | 56.47 |
| KRH35529 | Soybean | cytosol | 50.56 | 56.19 |
| Solyc09g075970.2.1 | Tomato | cytosol | 52.78 | 56.03 |
| KRG91288 | Soybean | cytosol | 49.89 | 55.45 |
| Bra032465.1-P | Field mustard | cytosol | 48.11 | 51.92 |
| AT1G05370.1 | Thale cress | cytosol | 48.11 | 51.8 |
| CDY59787 | Canola | cytosol | 47.88 | 51.68 |
| CDY10026 | Canola | cytosol | 47.44 | 51.2 |
| CDY64658 | Canola | cytosol | 38.75 | 51.03 |
| Bra015421.1-P | Field mustard | cytosol | 45.43 | 50.75 |
| Bra039949.1-P | Field mustard | cytosol | 44.99 | 50.37 |
| AT3G22410.1 | Thale cress | cytosol | 44.1 | 49.5 |
| Bra023828.1-P | Field mustard | nucleus | 42.76 | 47.41 |
| CDY10103 | Canola | extracellular | 28.29 | 47.21 |
| CDY38325 | Canola | cytosol | 36.97 | 44.74 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 31.63 | 44.65 |
| CDY10638 | Canola | nucleus | 31.63 | 37.77 |
| TraesCS3D01G433800.1 | Wheat | cytosol | 14.03 | 26.25 |
| TraesCS3D01G433700.1 | Wheat | cytosol | 13.81 | 24.9 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 15.81 | 24.32 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 15.59 | 23.97 |
| TraesCS5D01G538600.1 | Wheat | cytosol | 12.92 | 23.97 |
| TraesCS5D01G538300.1 | Wheat | cytosol | 13.36 | 23.53 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 15.14 | 23.29 |
| TraesCS5D01G538500.1 | Wheat | cytosol | 12.69 | 23.27 |
| TraesCS3D01G453300.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 14.25 | 22.94 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 10.47 | 22.49 |
| TraesCS7D01G090800.1 | Wheat | cytosol | 14.03 | 22.26 |
| TraesCS3D01G186000.2 | Wheat | nucleus | 14.03 | 20.79 |
| TraesCS5D01G538700.1 | Wheat | cytosol | 13.59 | 19.3 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 15.37 | 17.56 |
| TraesCS7D01G448500.3 | Wheat | mitochondrion, plastid | 10.69 | 15.48 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G242900.1 | EnsemblPlantsGene:TraesCS4D01G242900 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf |
| InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 | PFAM:PF00650 | PFscan:PS50191 |
| SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | TIGR:cd00170 | MapMan:35.2 |
Description
No Description!
Coordinates
chr4D:-:405461970..405464630
Molecular Weight (calculated)
50040.9 Da
IEP (calculated)
10.525
GRAVY (calculated)
-0.348
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVAAMAME KVDAKDREKI EAVRKVMRKQ APLSPKQAEY CNDACVERFL RAKGDNVKKA AKTLRAVLSW RETIGADHII ADEFSGELSE GMAYVAGHDD
101: ENRPVLMFKI KQDDYPKYQP QKSFVRFLVF TLEVAVASMN RFVDQFVLLF DASFFRSASA FLNLLMGTLK IVADYYPGRL HRAFVIDPPS LFSVMWKGVR
201: PFVDLAPATA VVSSLDFEDS LEDASFTAYP RTASLRFEPS VAAVLTTGKG GTAVGSASSR FAFSVSDNAL KPWYLSTTPA PGPRSVVPAS SSPSLVGASP
301: LSARSFSFAS PAARSTPTPV QQQRTARAPP TPSAAKGGQK TPSPLPQQQQ FPRTPRPSFL QSPFTFRKDG QASRVERERE SFLPFLRFYR RPYDEITYRA
401: MMRRPLGGLI AIVAEDFRPM SAQQPLRRHA GALHHQHHHH QHQHQHQRI
101: ENRPVLMFKI KQDDYPKYQP QKSFVRFLVF TLEVAVASMN RFVDQFVLLF DASFFRSASA FLNLLMGTLK IVADYYPGRL HRAFVIDPPS LFSVMWKGVR
201: PFVDLAPATA VVSSLDFEDS LEDASFTAYP RTASLRFEPS VAAVLTTGKG GTAVGSASSR FAFSVSDNAL KPWYLSTTPA PGPRSVVPAS SSPSLVGASP
301: LSARSFSFAS PAARSTPTPV QQQRTARAPP TPSAAKGGQK TPSPLPQQQQ FPRTPRPSFL QSPFTFRKDG QASRVERERE SFLPFLRFYR RPYDEITYRA
401: MMRRPLGGLI AIVAEDFRPM SAQQPLRRHA GALHHQHHHH QHQHQHQRI
001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.