CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10103	Canola	extracellular	75.66	95.91
Bra015421.1-P	Field mustard	cytosol	99.12	84.08
AT1G05370.1	Thale cress	cytosol	93.84	76.74
CDY10026	Canola	cytosol	90.62	74.28
CDY59787	Canola	cytosol	89.44	73.32
VIT_05s0020g03350.t01	Wine grape	cytosol	70.09	56.5
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	50.15	53.77
GSMUA_Achr7P27040_001	Banana	cytosol	56.01	43.91
CDY38325	Canola	cytosol	47.51	43.67
GSMUA_Achr3P29630_001	Banana	cytosol	54.25	43.22
GSMUA_Achr6P25200_001	Banana	cytosol	51.61	41.31
Os03t0219100-01	Rice	cytosol	52.79	41.1
EER95261	Sorghum	cytosol	51.32	39.41
Zm00001d048066_P001	Maize	cytosol	49.85	38.9
TraesCS4D01G242900.1	Wheat	cytosol	51.03	38.75
GSMUA_Achr5P08620_001	Banana	nucleus	52.49	38.58
Zm00001d028231_P003	Maize	cytosol	51.03	38.5
TraesCS4B01G243300.1	Wheat	cytosol	50.44	38.05
TraesCS4A01G065900.1	Wheat	cytosol	51.03	37.91
HORVU4Hr1G067410.4	Barley	plastid	51.61	35.27
CDY10638	Canola	nucleus	31.67	28.72
CDY38239	Canola	cytosol	4.99	26.98
CDY38240	Canola	peroxisome	8.5	20.0
CDY12289	Canola	cytosol	11.14	18.01
CDY00428	Canola	cytosol	15.84	17.7
CDY56380	Canola	cytosol	15.84	17.7
CDX90047	Canola	cytosol	12.32	16.47
CDY21345	Canola	cytosol	15.25	16.15
CDY15164	Canola	cytosol	12.02	16.08
CDY38020	Canola	cytosol	12.32	16.03
CDY05023	Canola	cytosol	14.37	15.61
CDX90694	Canola	cytosol	14.08	15.53
CDX73146	Canola	cytosol	12.61	14.88
CDY16746	Canola	plastid	10.85	14.57
CDX87279	Canola	plastid	10.85	14.57
CDY33738	Canola	cytosol	10.26	14.34
CDY24776	Canola	cytosol	12.32	14.33
CDX72592	Canola	cytosol	12.02	14.19
CDY65854	Canola	nucleus	12.02	14.19
CDY42697	Canola	cytosol	12.02	14.19
CDY35466	Canola	cytosol	12.02	13.99
CDX81674	Canola	cytosol	9.68	13.52
CDY51766	Canola	cytosol	9.68	13.47
CDY45292	Canola	cytosol	9.68	13.47
CDY33739	Canola	cytosol	9.97	13.44
CDY45413	Canola	cytosol	13.49	11.95
CDX81673	Canola	endoplasmic reticulum, golgi	9.97	11.18
CDX81672	Canola	cytosol	9.97	8.85
CDX75583	Canola	cytosol	3.23	7.01

Protein Annotations

EnsemblPlants:CDY64658	EnsemblPlantsGene:GSBRNA2T00042503001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:IPR001251
InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	PFAM:PF00650	PFscan:PS50191	ProteinID:CDY64658
ProteinID:CDY64658.1	SEG:seg	SMART:SM00516	SUPFAM:SSF52087	UniParc:UPI0004EE501F	UniProt:A0A078JAR8
MapMan:35.2	:	:	:	:	:

Description

BnaAnng19600DBnaAnng19600D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JAR8]

Coordinates

chrLK034512:-:26978..29012

Molecular Weight (calculated)

38688.4 Da

IEP (calculated)

10.007

GRAVY (calculated)

-0.138

Length

341 amino acids

Sequence
(BLAST)

001: SLIADEFTAE LAEGLAYVAG LDDECRPVLV FRIKQDYQKL HTQKQLTRLV VFTLEVAIST MCRNVEEFVI LFDASFFKSA SAFMNILVTT LKIVAEYYPC
101: RLFKAFVIDP PSLFSYFWKG IRSFLDLSTA TMIVSMQNFQ NSFDYDDFSS SYPSRVSSLR FDTSSIKSTD KIGSCASSRF AFTVSRDGLD TVKPWCLTLT
201: DTSSSKLGHT GAYLSPLNAR SFSFASPAAR REPIGGPRKS FFASTPMPAR TTDCHSIGGT LRDPRVPRPS FFQSPAVFFR RESHVSKIEK PRDTFVPFLK
301: FYRRPYDEMT YRSKMRPPLG GLVSIVSTQI RRRHVSLSQR F

Best Arabidopsis Sequence Match ( AT1G05370.1 )
(BLAST)

001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.