Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012311.1-P | Field mustard | cytosol | 96.07 | 96.07 |
| CDY56380 | Canola | cytosol | 95.74 | 95.74 |
| AT1G22180.4 | Thale cress | cytosol | 85.57 | 83.12 |
| CDY38239 | Canola | cytosol | 17.05 | 82.54 |
| CDY38240 | Canola | peroxisome | 38.03 | 80.0 |
| CDY21345 | Canola | cytosol | 83.93 | 79.5 |
| CDX90694 | Canola | cytosol | 60.66 | 59.87 |
| CDY05023 | Canola | cytosol | 60.98 | 59.24 |
| KRH16691 | Soybean | cytosol | 63.93 | 58.73 |
| KRH18888 | Soybean | cytosol | 63.28 | 57.96 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 58.03 | 56.19 |
| KRH53100 | Soybean | cytosol | 49.84 | 55.47 |
| KRH62380 | Soybean | cytosol | 49.51 | 55.11 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 64.59 | 54.57 |
| Solyc04g072810.2.1 | Tomato | cytosol | 57.7 | 53.99 |
| PGSC0003DMT400024527 | Potato | cytosol | 58.03 | 53.64 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 57.05 | 52.1 |
| CDY12289 | Canola | cytosol | 35.74 | 51.66 |
| EES05517 | Sorghum | cytosol | 55.08 | 48.0 |
| CDX73146 | Canola | cytosol | 44.92 | 47.4 |
| KRH62383 | Soybean | cytosol | 52.79 | 46.94 |
| Zm00001d052231_P003 | Maize | cytosol | 53.77 | 46.86 |
| Os02t0752000-01 | Rice | cytosol | 55.41 | 44.71 |
| CDY24776 | Canola | cytosol | 42.62 | 44.37 |
| CDY35466 | Canola | cytosol | 41.97 | 43.69 |
| CDY65854 | Canola | nucleus | 41.31 | 43.6 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 56.07 | 43.51 |
| CDX72592 | Canola | cytosol | 40.98 | 43.25 |
| CDY42697 | Canola | cytosol | 40.98 | 43.25 |
| CDX75583 | Canola | cytosol | 21.97 | 42.68 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 56.07 | 42.43 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 55.08 | 41.69 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 55.08 | 41.69 |
| CDY45413 | Canola | cytosol | 44.92 | 35.58 |
| CDY15164 | Canola | cytosol | 22.62 | 27.06 |
| CDX90047 | Canola | cytosol | 22.62 | 27.06 |
| CDY38020 | Canola | cytosol | 21.97 | 25.57 |
| CDX81674 | Canola | cytosol | 20.33 | 25.41 |
| CDY33738 | Canola | cytosol | 20.33 | 25.41 |
| CDY51766 | Canola | cytosol | 19.34 | 24.08 |
| CDY45292 | Canola | cytosol | 19.34 | 24.08 |
| CDX87279 | Canola | plastid | 20.0 | 24.02 |
| CDY16746 | Canola | plastid | 20.0 | 24.02 |
| CDY33739 | Canola | cytosol | 17.7 | 21.34 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 18.03 | 18.09 |
| CDY10026 | Canola | cytosol | 23.93 | 17.55 |
| CDY59787 | Canola | cytosol | 23.28 | 17.07 |
| CDY10638 | Canola | nucleus | 20.66 | 16.76 |
| CDY64658 | Canola | cytosol | 17.7 | 15.84 |
| CDY38325 | Canola | cytosol | 18.36 | 15.09 |
| CDX81672 | Canola | cytosol | 18.69 | 14.84 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 14.1 | 13.52 |
| CDY10103 | Canola | extracellular | 10.16 | 11.52 |
Protein Annotations
| EnsemblPlants:CDY00428 | EnsemblPlantsGene:GSBRNA2T00110074001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | PFAM:PF00650 |
| PFscan:PS50191 | ProteinID:CDY00428 | ProteinID:CDY00428.1 | SEG:seg | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EC91A7 | MapMan:35.2 | : | : |
Description
BnaC07g13980D
Coordinates
chrLK031918:-:942484..944442
Molecular Weight (calculated)
35325.9 Da
IEP (calculated)
6.275
GRAVY (calculated)
-0.698
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLGTKSSSS SGFENTSPPE DYLNKIKEVR TLLGPLTEKS SEYCSDDAIT RYLAARNGHV KKAAKMLKET LKWRIQYKPE EIRWEEIARE AETGKIYRSN
101: YTDKYGRPVL VMRPSCQNTK SPKGQIRFLV YCMENAIMNL PDNQEQMVWL IDFHGFNMSH LSIKVSRETA HVLQEHYPER LGLAILYNPP KIFEPFWKMV
201: KPFLEPKTCN KVKFVYSDDN LSKKILEDIF DMEQLEVAFG GENSDLSFNF EKYAERMRED DLKFYGNTPV SSTSAHFTNS DSEVSDTEMK RLEDIPDEKI
301: KNGTS
101: YTDKYGRPVL VMRPSCQNTK SPKGQIRFLV YCMENAIMNL PDNQEQMVWL IDFHGFNMSH LSIKVSRETA HVLQEHYPER LGLAILYNPP KIFEPFWKMV
201: KPFLEPKTCN KVKFVYSDDN LSKKILEDIF DMEQLEVAFG GENSDLSFNF EKYAERMRED DLKFYGNTPV SSTSAHFTNS DSEVSDTEMK RLEDIPDEKI
301: KNGTS
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.